Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 1.0e-117 426.8 223 100.0
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 6.1e-94 347.8 206 91.3
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 6.5e-88 327.8 196 89.8
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 1.6e-81 306.6 223 76.7
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 1.2e-73 280.4 201 77.1
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 5.6e-71 271.6 216 67.1
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 3.5e-65 252.3 186 74.2
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 1.9e-63 246.5 155 85.8
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 9.5e-63 244.2 146 89.7
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 6.2e-62 241.5 170 72.4
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 1.0e-61 240.7 154 82.5
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 1.8e-61 240.0 167 78.4
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 3.1e-61 239.2 150 86.7
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 6.8e-61 238.0 170 72.4
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 8.9e-61 237.7 168 78.0
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 2.6e-60 236.1 167 77.8
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 4.4e-60 235.3 191 71.2
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 4.4e-60 235.3 167 78.4
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 5.8e-60 235.0 201 67.7
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 9.8e-60 234.2 167 78.4
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 9.8e-60 234.2 164 77.4
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 1.7e-59 233.4 169 71.6
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 2.2e-59 233.0 169 71.6
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 3.7e-59 232.3 162 75.3
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 4.9e-59 231.9 146 87.7
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 7.0e-58 228.0 191 69.6
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 4.6e-57 225.3 166 75.3
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 4.6e-57 225.3 173 74.0
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 7.8e-57 224.6 176 69.3
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 1.0e-56 224.2 184 66.8
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 1.3e-56 223.8 167 65.3
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 1.7e-56 223.4 167 74.3
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 3.0e-56 222.6 185 69.7
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 5.0e-56 221.9 168 72.0
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 6.6e-56 221.5 181 71.8
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 6.6e-56 221.5 162 73.5
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 8.6e-56 221.1 186 68.8
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 4.3e-55 218.8 174 71.8
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 4.3e-55 218.8 207 65.2
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 4.3e-55 218.8 170 72.4
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 4.3e-55 218.8 185 68.6
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 5.6e-55 218.4 186 68.8
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 7.3e-55 218.0 172 75.0
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 9.5e-55 217.6 158 74.7
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 9.5e-55 217.6 160 78.8
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 1.2e-54 217.2 152 77.6
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 1.6e-54 216.9 174 72.4
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 2.1e-54 216.5 145 81.4
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 4.7e-54 215.3 193 64.2
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 6.2e-54 214.9 192 61.5
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 1.1e-53 214.2 145 79.3
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 1.4e-53 213.8 149 81.2
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 1.4e-53 213.8 148 78.4
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 1.8e-53 213.4 193 61.7
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 4.0e-53 212.2 198 63.1
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 8.9e-53 211.1 164 70.7
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 1.2e-52 210.7 194 63.9
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 1.2e-52 210.7 213 57.3
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 1.5e-52 210.3 164 70.7
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 1.5e-52 210.3 164 70.7
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 2.6e-52 209.5 199 62.8
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 2.6e-52 209.5 145 80.7
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 3.4e-52 209.1 193 63.7
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 5.8e-52 208.4 154 71.4
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 7.5e-52 208.0 148 75.7
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 7.5e-52 208.0 164 70.7
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 9.8e-52 207.6 148 75.7
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 1.7e-51 206.8 148 75.7
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 2.2e-51 206.5 160 70.6
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 4.9e-51 205.3 196 62.8
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 6.4e-51 204.9 193 62.7
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 8.3e-51 204.5 157 77.1
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 3.2e-50 202.6 219 57.5
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 5.4e-50 201.8 159 61.6
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 2.1e-49 199.9 197 62.4
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 1.0e-48 197.6 146 76.0
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 2.5e-47 193.0 134 81.3
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 3.6e-46 189.1 129 79.1
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 1.4e-45 187.2 126 84.9
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 3.1e-45 186.0 143 66.4
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 4.0e-45 185.7 121 85.1
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 4.4e-44 182.2 148 74.3
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 4.1e-42 175.6 142 68.3
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 2.3e-40 169.9 155 61.3
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 4.7e-38 162.2 119 76.5
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 2.6e-28 129.8 152 52.0
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 5.4e-26 122.1 74 91.9
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 1.9e-23 113.6 65 87.7
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 4.0e-21 105.9 66 75.8
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 2.2e-11 73.6 44 84.1
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 9.3e-10 68.2 166 28.9
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 3.5e-09 66.2 41 82.9


User provided reference genes

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