Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G222200 Prunus persica HOM05D004257 ORTHO05D005202 3.0e-199 698.4 359 100.0
MD10G1182800 Malus domestica HOM05D004257 ORTHO05D005202 1.4e-180 636.3 363 90.4
MD05G1195500 Malus domestica HOM05D004257 ORTHO05D005202 2.9e-178 628.6 363 89.8
RcHm_v2.0_Chr6g0287891 Rosa chinensis HOM05D004257 ORTHO05D005202 9.3e-169 597.0 362 87.0
FAN20G1479 Fragaria x ananassa HOM05D004257 ORTHO05D005202 6.7e-167 590.9 360 86.9
FAN27G2888 Fragaria x ananassa HOM05D004257 ORTHO05D005202 4.3e-166 588.2 360 86.4
FAN24G1061 Fragaria x ananassa HOM05D004257 ORTHO05D005202 2.1e-165 585.9 360 86.1
FvH4_2g21300 Fragaria vesca HOM05D004257 ORTHO05D005202 1.1e-164 583.6 359 85.8
FAN15G2746 Fragaria x ananassa HOM05D004257 ORTHO05D005202 2.2e-162 575.9 359 85.0
Potri.002G037400 Populus trichocarpa HOM05D004257 ORTHO05D005202 5.6e-158 561.2 359 80.5
Sabra02G0030200 Salix brachista HOM05D004257 ORTHO05D005202 2.8e-157 558.9 359 80.2
Potri.005G225700 Populus trichocarpa HOM05D004257 ORTHO05D005202 1.8e-156 556.2 359 79.7
Manes.12G033300 Manihot esculenta HOM05D004257 ORTHO05D005202 2.4e-156 555.8 326 85.9
Duzib138G0002 Durio zibethinus HOM05D004257 ORTHO05D005202 1.5e-155 553.1 359 80.8
Duzib133G1463 Durio zibethinus HOM05D004257 ORTHO05D005202 2.0e-155 552.7 359 81.1
ClCG07G001120 Citrullus lanatus HOM05D004257 ORTHO05D005202 4.5e-155 551.6 359 79.9
Eucgr.K03257 Eucalyptus grandis HOM05D004257 ORTHO05D005202 4.5e-155 551.6 359 77.7
QL09p039362 Quercus lobata HOM05D004257 ORTHO05D005202 1.3e-154 550.1 345 82.3
COL.COLO4_04031 Corchorus olitorius HOM05D004257 ORTHO05D005202 1.7e-154 549.7 359 80.2
Thecc.01G256600 Theobroma cacao HOM05D004257 ORTHO05D005202 1.7e-154 549.7 359 79.7
CANSAT35G1745 Cannabis sativa HOM05D004257 ORTHO05D005202 1.1e-153 547.0 359 79.7
Cfa002439 Carpinus fangiana HOM05D004257 ORTHO05D005202 1.4e-153 546.6 359 79.4
CANSAT01G0143 Cannabis sativa HOM05D004257 ORTHO05D005202 1.9e-153 546.2 359 79.1
CsaV3_3G022160 Cucumis sativus L. HOM05D004257 ORTHO05D005202 5.5e-153 544.7 359 79.9
Gohir.D07G155600 Gossypium hirsutum HOM05D004257 ORTHO05D005202 7.1e-153 544.3 359 79.1
CSS0006901 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.6e-152 543.1 359 78.8
CSS0016221 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.6e-152 543.1 359 78.8
Gorai.001G178500 Gossypium raimondii HOM05D004257 ORTHO05D005202 1.6e-152 543.1 359 78.8
PGR044G0150 Punica granatum HOM05D004257 ORTHO05D005202 2.1e-152 542.7 359 78.3
Gohir.A07G149400 Gossypium hirsutum HOM05D004257 ORTHO05D005202 2.7e-152 542.3 359 78.8
MELO3C012874.2 Cucumis melo HOM05D004257 ORTHO05D005202 3.0e-151 538.9 359 79.4
TWI18G0956 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 3.0e-151 538.9 359 77.7
CiPaw.03G265600 Carya illinoinensis HOM05D004257 ORTHO05D005202 3.9e-151 538.5 326 83.4
Aqoxy2G03662 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 5.1e-151 538.1 337 79.8
CiPaw.04G187400 Carya illinoinensis HOM05D004257 ORTHO05D005202 5.1e-151 538.1 326 82.8
Nn3g19680 Nelumbo nucifera HOM05D004257 ORTHO05D005202 6.7e-151 537.7 359 78.6
Sed0014699 Sechium edule HOM05D004257 ORTHO05D005202 1.5e-150 536.6 359 78.0
TAR362G0002 Trochodendron aralioides HOM05D004257 ORTHO05D005202 1.5e-150 536.6 359 77.4
TAR365G0817 Trochodendron aralioides HOM05D004257 ORTHO05D005202 1.5e-150 536.6 359 78.0
Ciclev10021043m.g Citrus clementina HOM05D004257 ORTHO05D005202 1.9e-150 536.2 326 81.6
THA.LOC104825258 Tarenaya hassleriana HOM05D004257 ORTHO05D005202 2.5e-150 535.8 359 77.4
Dinv06012 Davidia involucrata HOM05D004257 ORTHO05D005202 4.3e-150 535.0 359 78.0
Gorai.007G147100 Gossypium raimondii HOM05D004257 ORTHO05D005202 4.3e-150 535.0 360 78.3
Sed0007154 Sechium edule HOM05D004257 ORTHO05D005202 5.7e-150 534.6 359 77.7
Atru.chr5.1712 Acer truncatum HOM05D004257 ORTHO05D005202 7.4e-150 534.3 326 81.9
Ca_08681_v3 Cicer arietinum L. HOM05D004257 ORTHO05D005202 7.4e-150 534.3 359 77.7
Gohir.D11G137300 Gossypium hirsutum HOM05D004257 ORTHO05D005202 1.3e-149 533.5 360 78.1
Haze_24645 Corylus avellana HOM05D004257 ORTHO05D005202 1.6e-149 533.1 387 73.4
Actinidia38939 Actinidia chinensis HOM05D004257 ORTHO05D005202 2.2e-149 532.7 359 77.4
Gohir.A11G131450 Gossypium hirsutum HOM05D004257 ORTHO05D005202 2.8e-149 532.3 360 78.3
Psat3g056800 Pisum sativum HOM05D004257 ORTHO05D005202 2.8e-149 532.3 359 77.7
TWI12G0832 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 3.7e-149 531.9 359 76.6
Medtr7g097060 Medicago truncatula HOM05D004257 ORTHO05D005202 4.8e-149 531.6 344 79.9
Hma1.2p1_0075F.1_g039210 Hydrangea macrophylla HOM05D004257 ORTHO05D005202 8.2e-149 530.8 359 76.9
Migut.O00233 Erythranthe guttata HOM05D004257 ORTHO05D005202 6.9e-148 527.7 330 81.5
BcaC02g09050 Brassica carinata HOM05D004257 ORTHO05D005202 9.0e-148 527.3 359 76.0
C04p37820 Brassica napus HOM05D004257 ORTHO05D005202 9.0e-148 527.3 359 76.0
BolC4t25358H Brassica oleracea HOM05D004257 ORTHO05D005202 9.0e-148 527.3 359 76.0
Lj5A229T68 Lonicera japonica HOM05D004257 ORTHO05D005202 9.0e-148 527.3 359 76.0
DCAR_010071 Daucus carota HOM05D004257 ORTHO05D005202 1.2e-147 526.9 359 75.2
Glyma.19G165400 Glycine max HOM05D004257 ORTHO05D005202 1.2e-147 526.9 329 81.2
Aa31sc35G30 Aethionema arabicum HOM05D004257 ORTHO05D005202 3.4e-147 525.4 359 75.8
VMungo1383G3387 Vigna mungo HOM05D004257 ORTHO05D005202 4.5e-147 525.0 360 76.7
A04p05160 Brassica napus HOM05D004257 ORTHO05D005202 5.9e-147 524.6 359 76.3
BraA04t16226Z Brassica rapa HOM05D004257 ORTHO05D005202 5.9e-147 524.6 359 76.3
Nitab4.5_0004454g0010 Nicotiana tabacum HOM05D004257 ORTHO05D005202 5.9e-147 524.6 359 76.0
PGSC0003DMG402031052 Solanum tuberosum HOM05D004257 ORTHO05D005202 5.9e-147 524.6 359 75.5
Carub.0005s2129 Capsella rubella HOM05D004257 ORTHO05D005202 1.3e-146 523.5 361 75.6
MBI07_g16916_MAGBIO Magnolia biondii HOM05D004257 ORTHO05D005202 1.3e-146 523.5 367 75.7
Phvul.001G161500 Phaseolus vulgaris HOM05D004257 ORTHO05D005202 1.3e-146 523.5 329 81.2
SGA_v2.0_scaffold90G27780 Striga asiatica HOM05D004257 ORTHO05D005202 1.3e-146 523.5 359 75.8
AT3G54690 Arabidopsis thaliana HOM05D004257 ORTHO05D005202 1.7e-146 523.1 361 76.2
Thhalv10010498m.g Eutrema salsugineum HOM05D004257 ORTHO05D005202 2.2e-146 522.7 361 75.3
PSO832G0932 Papaver somniferum HOM05D004257 ORTHO05D005202 2.2e-146 522.7 359 74.9
Lalb_Chr01g0019631 Lupinus albus HOM05D004257 ORTHO05D005202 3.8e-146 521.9 348 77.3
PSO210G0560 Papaver somniferum HOM05D004257 ORTHO05D005202 3.8e-146 521.9 359 74.9
vmacro10363 Vaccinium macrocarpon HOM05D004257 ORTHO05D005202 3.8e-146 521.9 366 75.1
CAN.G637.23 Capsicum annuum HOM05D004257 ORTHO05D005202 5.0e-146 521.5 359 75.2
Peaxi162Scf00171g00722 Petunia axillaris HOM05D004257 ORTHO05D005202 6.5e-146 521.2 359 75.5
Hund06906 Selenicereus undatus HOM05D004257 ORTHO05D005202 8.5e-146 520.8 359 74.4
Sopen03g028840 Solanum pennellii HOM05D004257 ORTHO05D005202 8.5e-146 520.8 359 74.9
BcaC08g44693 Brassica carinata HOM05D004257 ORTHO05D005202 1.1e-145 520.4 359 75.5
C06p22290 Brassica napus HOM05D004257 ORTHO05D005202 1.1e-145 520.4 359 75.5
Cc04_g09710 Coffea canephora HOM05D004257 ORTHO05D005202 1.1e-145 520.4 359 75.8
Aqoxy5G00217 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 1.4e-145 520.0 326 81.9
arahy.Tifrunner.gnm1.ann1.63G7RJ Arachis hypogaea HOM05D004257 ORTHO05D005202 1.4e-145 520.0 359 75.5
AL5G35770 Arabidopsis lyrata HOM05D004257 ORTHO05D005202 1.9e-145 519.6 361 75.6
PSO675G6112 Papaver somniferum HOM05D004257 ORTHO05D005202 1.9e-145 519.6 347 76.4
PSO675G8755 Papaver somniferum HOM05D004257 ORTHO05D005202 1.9e-145 519.6 347 76.4
Solyc03g098140.3 Solanum lycopersicum HOM05D004257 ORTHO05D005202 1.9e-145 519.6 359 74.7
MSTRG.23192 Avicennia marina HOM05D004257 ORTHO05D005202 2.5e-145 519.2 359 76.3
BcaB02g07726 Brassica carinata HOM05D004257 ORTHO05D005202 2.5e-145 519.2 359 75.2
Sc09g0004250 Simmondsia chinensis HOM05D004257 ORTHO05D005202 2.5e-145 519.2 359 75.2
Ah.04g163130 Amaranthus hybridus HOM05D004257 ORTHO05D005202 7.2e-145 517.7 326 78.5
BolC6t37415H Brassica oleracea HOM05D004257 ORTHO05D005202 7.2e-145 517.7 359 75.2
PSO675G8702 Papaver somniferum HOM05D004257 ORTHO05D005202 7.2e-145 517.7 347 76.1
Lj1g0005279 Lotus japonicus HOM05D004257 ORTHO05D005202 2.7e-144 515.8 359 74.4
Sp5g07760 Schrenkiella parvula HOM05D004257 ORTHO05D005202 3.6e-144 515.4 361 75.3
AUR62040921 Chenopodium quinoa HOM05D004257 ORTHO05D005202 4.6e-144 515.0 326 79.1
CARHR164610 Cardamine hirsuta HOM05D004257 ORTHO05D005202 6.1e-144 514.6 359 74.1
Cpa.g.sc473.3 Carica papaya HOM05D004257 ORTHO05D005202 7.9e-144 514.2 347 77.5
AUR62004833 Chenopodium quinoa HOM05D004257 ORTHO05D005202 2.3e-143 512.7 326 79.1
arahy.Tifrunner.gnm1.ann1.BG7UA0 Arachis hypogaea HOM05D004257 ORTHO05D005202 2.5e-142 509.2 380 71.6
DCAR_014267 Daucus carota HOM05D004257 ORTHO05D005202 2.5e-142 509.2 326 78.5
MSTRG.11529 Avicennia marina HOM05D004257 ORTHO05D005202 2.8e-141 505.8 319 79.6
CSS0001153 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.2e-139 500.4 361 74.2
HanXRQChr17g0542071 Helianthus annuus HOM05D004257 ORTHO05D005202 1.2e-139 500.4 359 73.8
Lsat_1_v5_gn_3_39581 Lactuca sativa HOM05D004257 ORTHO05D005202 1.7e-138 496.5 359 73.0
TPR.G7131 Trifolium pratense HOM05D004257 ORTHO05D005202 2.2e-138 496.1 400 68.0
Nitab4.5_0000936g0060 Nicotiana tabacum HOM05D004257 ORTHO05D005202 3.8e-138 495.4 345 74.2
CSS0049630 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 4.4e-134 481.9 344 74.1
BraA07t29902Z Brassica rapa HOM05D004257 ORTHO05D005202 4.1e-132 475.3 359 71.6
ATR0736G010 Amborella trichopoda HOM05D004257 ORTHO05D005202 2.0e-131 473.0 359 68.0
BcaC05g28242 Brassica carinata HOM05D004257 ORTHO05D005202 3.8e-130 468.8 359 71.0
BolC5t33007H Brassica oleracea HOM05D004257 ORTHO05D005202 3.8e-130 468.8 359 71.0
HPP92_010358 Vanilla planifolia HOM05D004257 ORTHO05D005202 9.4e-129 464.2 336 71.4
HPP92_017366 Vanilla planifolia HOM05D004257 ORTHO05D005202 1.6e-128 463.4 330 72.7
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 8.8e-127 457.6 332 70.8
Zm00001eb207770 Zea mays HOM05D004257 ORTHO05D005202 9.7e-126 454.1 341 68.3
Zm00001eb232580 Zea mays HOM05D004257 ORTHO05D005202 9.7e-126 454.1 364 65.7
CDE04G1210 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 6.3e-125 451.4 279 80.3
Os02g0158300 Oryza sativa ssp. japonica HOM05D004257 ORTHO05D005202 8.2e-125 451.1 363 65.8
GSVIVG01028350001 Vitis vinifera HOM05D004257 ORTHO05D005202 3.1e-124 449.1 359 67.1
AagrBONN_evm.TU.Sc2ySwM_344.1200 Anthoceros agrestis HOM05D004257 ORTHO05D005202 9.1e-124 447.6 318 70.1
CSS0045427 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 9.1e-124 447.6 345 71.0
AagrBONN_evm.TU.Sc2ySwM_344.3818 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.6e-123 446.8 318 70.4
Mapoly0023s0132 Marchantia polymorpha HOM05D004257 ORTHO05D005202 3.5e-123 445.7 338 66.3
unitig_0.g1405 Utricularia gibba HOM05D004257 ORTHO05D005202 2.9e-122 442.6 345 68.1
CDE02G1046 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 1.5e-121 440.3 326 70.2
SalBow5G3197 Salvia bowleyana HOM05D004257 ORTHO05D005202 5.5e-121 438.3 281 78.6
SalBow5G4297 Salvia bowleyana HOM05D004257 ORTHO05D005202 5.5e-121 438.3 281 78.6
SMO367G0216 Selaginella moellendorffii HOM05D004257 ORTHO05D005202 1.2e-118 430.6 318 68.2
unitig_61.g26464 Utricularia gibba HOM05D004257 ORTHO05D005202 4.8e-117 425.2 326 68.4
Pp3c23_13620 Physcomitrium patens HOM05D004257 ORTHO05D005202 4.4e-110 402.1 321 62.3
EL10Ac4g09002 Beta vulgaris HOM05D004257 ORTHO05D005202 1.1e-108 397.5 256 77.0
ECA246G4101 Erigeron canadensis HOM05D004257 ORTHO05D005202 1.6e-107 393.7 231 84.4
CBR_g20340 Chara braunii HOM05D004257 ORTHO05D005202 7.7e-107 391.3 340 59.1
Pp3c5_14840 Physcomitrium patens HOM05D004257 ORTHO05D005202 2.3e-106 389.8 325 61.8
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 2.2e-101 373.2 229 80.8
C05p42800 Brassica napus HOM05D004257 ORTHO05D005202 7.8e-99 364.8 267 73.0
BcaB02g08451 Brassica carinata HOM05D004257 ORTHO05D005202 2.4e-92 343.2 199 83.4
Pp3c24_11040 Physcomitrium patens HOM05D004257 ORTHO05D005202 2.5e-81 306.6 301 55.5
PSO470G0001 Papaver somniferum HOM05D004257 ORTHO05D005202 9.9e-78 294.7 214 72.9
CAN.G65.83 Capsicum annuum HOM05D004257 ORTHO05D005202 1.4e-76 290.8 248 63.3
SGA_v2.0_scaffold25G10776 Striga asiatica HOM05D004257 ORTHO05D005202 6.4e-69 265.4 185 74.6
SEGI_22917 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 2.1e-64 250.4 185 66.5
SEGI_29481 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 2.1e-64 250.4 185 66.5
AagrBONN_evm.TU.Sc2ySwM_228.5393 Anthoceros agrestis HOM05D004257 ORTHO05D005202 9.9e-62 241.5 165 70.9
A07p22230 Brassica napus HOM05D004257 ORTHO05D005202 6.2e-56 222.2 131 81.7
Oeu036414.1 Olea europaea HOM05D004257 ORTHO05D005202 2.6e-54 216.9 123 85.4
Actinidia34751 Actinidia chinensis HOM05D000378 ORTHO05D005202 3.8e-53 213.0 119 85.7
SEGI_04972 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 1.6e-51 207.6 122 77.9
BcaC07g39794 Brassica carinata HOM05D004257 ORTHO05D005202 2.5e-44 183.7 164 59.8
BolC8t50595H Brassica oleracea HOM05D004257 ORTHO05D005202 6.0e-43 179.1 164 59.8
C08p29840 Brassica napus HOM05D004257 ORTHO05D005202 3.3e-41 173.3 164 58.5
AagrBONN_evm.TU.Sc2ySwM_228.5394 Anthoceros agrestis HOM05D004257 ORTHO05D005202 3.5e-35 153.3 130 60.0
Peaxi162Scf00643g00656 Petunia axillaris HOM05D004257 ORTHO05D005202 3.8e-29 133.3 118 63.6
Lsat_1_v5_gn_8_28701 Lactuca sativa HOM05D004257 ORTHO05D005202 1.1e-28 131.7 92 75.0
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 1.8e-26 124.4 167 44.9
Rhsim05G0133300 Rhododendron simsii HOM05D004257 ORTHO05D005202 5.1e-26 122.9 90 72.2
EL10Ac4g09003 Beta vulgaris HOM05D004257 ORTHO05D005202 2.0e-25 120.9 70 84.3
Rhsim08G0010200 Rhododendron simsii HOM05D000535 ORTHO05D000427 7.2e-20 102.4 69 72.5
Lj6g0021985 Lotus japonicus HOM05D004257 ORTHO05D236371 9.4e-20 102.1 78 62.8
Pp3c2_23370 Physcomitrium patens HOM05D004257 ORTHO05D005202 1.4e-15 88.2 107 47.7
BcaB01g01067 Brassica carinata HOM05D004257 ORTHO05D092693 9.1e-15 85.5 78 55.1
Rhsim04G0042100 Rhododendron simsii HOM05D004257 ORTHO05D005202 5.9e-14 82.8 49 79.6
Lsat_1_v5_gn_6_26721 Lactuca sativa HOM05D004257 ORTHO05D230427 2.2e-08 64.3 66 56.1
RhsimUnG0176200 Rhododendron simsii HOM05D000026 ORTHO05D000127 3.7e-08 63.5 51 62.7
CDE04G3164 Ceratophyllum demersum HOM05D004257 ORTHO05D130150 8.2e-08 62.4 36 75.0


User provided reference genes

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