Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 6.9e-251 870.2 438 100.0
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 2.8e-215 751.9 435 86.0
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 1.6e-202 709.5 435 82.1
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 1.4e-198 696.4 434 80.9
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 1.7e-196 689.5 435 80.7
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 2.4e-195 685.6 435 80.2
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 2.4e-187 659.1 455 75.2
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 6.2e-175 617.8 429 71.1
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 2.0e-173 612.8 430 70.9
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 6.4e-172 607.8 429 71.1
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 3.5e-170 602.1 430 69.8
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 6.6e-169 597.8 428 70.1
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 1.1e-166 590.5 426 68.1
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 1.8e-166 589.7 434 68.2
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 9.0e-166 587.4 426 69.2
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 5.8e-165 584.7 427 67.4
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.7e-164 583.2 421 67.5
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 5.4e-163 578.2 430 65.8
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 9.3e-163 577.4 427 67.0
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 2.7e-162 575.9 428 65.7
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 4.6e-162 575.1 500 60.4
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 7.9e-162 574.3 421 67.0
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 7.4e-160 567.8 432 63.9
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 6.2e-159 564.7 423 65.2
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 1.4e-158 563.5 434 66.4
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 4.0e-158 562.0 432 64.8
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 4.0e-158 562.0 428 65.9
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 5.3e-158 561.6 428 65.9
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 5.3e-158 561.6 434 63.6
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 1.2e-157 560.5 426 66.7
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 1.2e-157 560.5 434 63.8
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 3.4e-157 558.9 421 64.4
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 7.6e-157 557.8 430 64.9
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 1.3e-156 557.0 425 65.4
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 1.3e-156 557.0 433 63.5
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 2.2e-156 556.2 419 64.2
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 6.4e-156 554.7 422 64.2
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 6.4e-156 554.7 434 64.7
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 2.5e-155 552.7 422 64.2
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 2.5e-155 552.7 434 62.7
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 3.2e-155 552.4 424 63.9
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 5.5e-155 551.6 425 64.9
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 7.1e-155 551.2 436 63.8
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 7.1e-155 551.2 422 64.0
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 2.1e-154 549.7 422 63.7
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 7.9e-154 547.7 425 63.8
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.3e-153 547.0 424 65.3
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 2.3e-153 546.2 428 63.1
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 2.3e-153 546.2 428 62.6
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 5.1e-153 545.0 436 62.2
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 1.9e-152 543.1 426 62.0
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 1.9e-152 543.1 420 64.8
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 2.5e-152 542.7 420 63.1
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 3.3e-152 542.3 431 62.6
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 4.3e-152 542.0 434 62.4
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 7.4e-152 541.2 423 62.4
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 7.4e-152 541.2 429 62.9
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 1.6e-151 540.0 421 61.8
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 2.8e-151 539.3 407 65.1
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 2.8e-151 539.3 420 64.3
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 6.2e-151 538.1 420 62.6
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 1.1e-150 537.3 409 65.0
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.4e-150 537.0 434 62.0
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 4.0e-150 535.4 429 62.2
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 5.3e-150 535.0 428 62.9
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.2e-149 533.9 423 60.5
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 1.5e-149 533.5 422 63.3
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 2.9e-148 529.3 436 61.0
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 1.1e-147 527.3 418 61.5
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.6e-146 523.5 427 59.7
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 4.6e-146 521.9 408 61.5
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 1.0e-145 520.8 395 65.1
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 1.9e-144 516.5 421 60.6
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 2.5e-144 516.2 430 60.0
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 4.3e-144 515.4 420 58.1
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 3.7e-143 512.3 458 60.7
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 4.1e-142 508.8 439 57.4
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 9.0e-142 507.7 433 58.0
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 9.0e-142 507.7 376 64.9
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 7.7e-141 504.6 426 58.9
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 3.8e-140 502.3 397 63.2
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 6.1e-138 495.0 469 55.7
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 1.4e-137 493.8 478 54.0
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 3.0e-137 492.7 382 65.4
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 2.0e-136 490.0 397 60.5
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 1.4e-134 483.8 423 57.9
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 6.9e-134 481.5 429 59.0
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 7.7e-133 478.0 372 63.2
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 1.2e-130 470.7 418 56.2
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 3.6e-130 469.2 421 56.1
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 4.4e-128 462.2 372 59.9
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 1.1e-126 457.6 369 59.9
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 1.5e-120 437.2 417 54.9
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 3.1e-118 429.5 327 65.7
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 9.1e-118 427.9 421 52.7
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.4e-105 387.5 432 48.1
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 1.2e-104 384.4 287 65.9
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.1e-102 377.9 432 46.3
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 7.7e-101 371.7 428 45.8
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 1.2e-98 364.4 430 43.7
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 7.0e-86 322.0 304 51.3
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 1.2e-85 321.2 420 40.5
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 5.6e-83 312.4 221 65.6
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 1.2e-80 304.7 404 40.8
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 9.8e-80 301.6 263 62.0
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 5.4e-78 295.8 373 44.0
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 1.7e-68 264.2 256 55.9
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 5.1e-68 262.7 203 67.0
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 7.9e-53 212.2 461 34.9
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 1.9e-51 207.6 224 49.6
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 1.3e-50 204.9 448 32.1
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 1.5e-35 154.8 103 68.0
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 4.8e-34 149.8 105 67.6
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 5.3e-33 146.4 103 64.1
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 4.5e-32 143.3 100 69.0
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 5.8e-32 142.9 116 62.1
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 1.5e-27 128.3 412 29.1
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 4.3e-27 126.7 88 69.3
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 8.2e-26 122.5 93 58.1
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 1.0e-20 105.5 71 73.2
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 5.3e-17 93.2 92 47.8
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 1.9e-14 84.7 74 58.1
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 3.0e-12 77.4 69 53.6
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 3.9e-12 77.0 57 68.4
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 6.7e-12 76.3 53 64.2
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 1.1e-09 68.9 54 70.4
Cre16.g671450 Chlamydomonas reinhardtii HOM05D005694 ORTHO05D007402 3.8e-07 60.5 97 37.1


User provided reference genes

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