Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 4.8e-177 624.4 319 100.0
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 4.0e-147 525.0 325 84.0
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 9.8e-146 520.4 314 85.7
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 3.7e-145 518.5 314 85.0
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 9.2e-144 513.8 314 84.1
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 1.2e-140 503.4 314 83.1
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 1.1e-128 463.8 308 77.3
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 3.2e-128 462.2 309 77.7
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 2.7e-127 459.1 309 78.0
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 4.6e-127 458.4 304 78.9
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 2.8e-124 449.1 309 75.1
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 3.6e-124 448.7 309 77.0
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 8.1e-124 447.6 308 75.6
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 1.1e-123 447.2 310 76.8
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 5.2e-123 444.9 308 75.0
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 1.5e-122 443.4 308 75.0
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 2.0e-122 443.0 317 74.4
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 2.9e-121 439.1 320 72.5
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 2.9e-121 439.1 311 74.3
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 6.4e-121 438.0 308 75.6
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 8.4e-121 437.6 282 80.1
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 1.4e-120 436.8 316 72.8
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 1.4e-120 436.8 312 73.4
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 2.4e-120 436.0 309 74.1
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 2.4e-120 436.0 257 85.2
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 1.6e-119 433.3 320 72.2
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 2.1e-119 433.0 309 75.1
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 1.0e-118 430.6 312 73.1
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 1.7e-118 429.9 313 73.8
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 1.7e-118 429.9 305 73.4
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 2.3e-118 429.5 264 81.8
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 2.3e-118 429.5 319 73.0
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 3.0e-118 429.1 312 72.4
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 6.6e-118 427.9 285 76.8
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 8.7e-118 427.6 303 73.6
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 1.9e-117 426.4 313 71.6
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 3.3e-117 425.6 312 72.1
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 9.6e-117 424.1 307 73.3
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 1.3e-116 423.7 315 71.1
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 2.8e-116 422.5 249 85.5
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 4.8e-116 421.8 290 75.5
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 4.8e-116 421.8 261 80.8
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 6.2e-116 421.4 316 71.2
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 1.8e-115 419.9 308 72.4
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 2.4e-115 419.5 303 72.9
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 3.1e-115 419.1 242 86.4
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 6.9e-115 417.9 261 80.5
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 9.0e-115 417.5 308 71.8
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 9.0e-115 417.5 313 70.6
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 9.0e-115 417.5 307 72.3
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 2.6e-114 416.0 312 70.5
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 1.3e-113 413.7 294 73.5
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 1.7e-113 413.3 292 73.6
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 1.7e-113 413.3 262 78.6
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 1.7e-113 413.3 273 76.9
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 1.1e-112 410.6 294 72.8
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 1.1e-112 410.6 307 70.7
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 9.3e-112 407.5 309 70.9
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 3.5e-111 405.6 242 83.1
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 4.6e-111 405.2 242 83.5
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 6.0e-111 404.8 247 80.2
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 6.0e-111 404.8 276 76.1
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 7.9e-111 404.4 302 70.2
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 3.9e-110 402.1 312 68.6
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 1.5e-109 400.2 255 79.2
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 4.3e-109 398.7 273 74.0
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 5.6e-109 398.3 305 70.5
Hund09482 Selenicereus undatus HOM05D006330 ORTHO05D008013 2.8e-108 396.0 278 74.1
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 6.2e-108 394.8 257 77.0
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 1.2e-106 390.6 241 80.9
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 9.9e-106 387.5 298 67.8
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 9.9e-106 387.5 310 67.1
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 2.9e-105 386.0 281 71.2
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 2.9e-105 386.0 281 71.2
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 2.9e-105 386.0 299 67.6
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 4.2e-104 382.1 232 82.8
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 9.3e-104 380.9 251 76.9
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 1.2e-103 380.6 302 65.9
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 1.2e-103 380.6 307 65.8
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 2.1e-103 379.8 281 69.0
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 2.1e-103 379.8 302 66.9
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 2.1e-103 379.8 281 69.0
AL3G41590 Arabidopsis lyrata HOM05D006330 ORTHO05D008013 3.5e-103 379.0 298 66.4
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 6.0e-103 378.3 302 66.6
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 1.3e-102 377.1 310 64.5
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 3.0e-102 375.9 308 65.6
COL.COLO4_34269 Corchorus olitorius HOM05D006330 ORTHO05D008013 3.9e-102 375.6 219 86.3
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 5.1e-102 375.2 308 65.6
AT3G25470 Arabidopsis thaliana HOM05D006330 ORTHO05D008013 6.7e-102 374.8 298 65.1
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 5.6e-101 371.7 321 65.4
AUR62028646 Chenopodium quinoa HOM05D006330 ORTHO05D008013 3.1e-99 365.9 216 84.7
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 4.6e-95 352.1 256 75.4
Pp3c24_1560 Physcomitrium patens HOM05D006330 ORTHO05D008013 4.6e-95 352.1 260 66.5
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 1.0e-94 350.9 266 65.8
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 1.8e-94 350.1 261 73.9
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 1.8e-94 350.1 266 71.1
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 3.0e-94 349.4 281 66.5
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 5.1e-94 348.6 339 59.3
FAN27G2337 Fragaria x ananassa HOM05D006330 ORTHO05D008013 1.5e-93 347.1 313 63.6
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 5.7e-93 345.1 256 73.4
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 3.7e-92 342.4 243 72.8
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 1.0e-89 334.3 218 79.8
CBR_g60689 Chara braunii HOM05D006330 ORTHO05D008013 1.1e-88 330.9 251 67.3
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 1.6e-87 327.0 240 72.5
SMO141G0006 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 6.3e-84 315.1 252 63.1
SMO186G0001 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 2.6e-82 309.7 243 63.8
Cpa.g.sc8.41 Carica papaya HOM05D006330 ORTHO05D008013 8.5e-81 304.7 220 71.8
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 1.9e-80 303.5 260 61.5
PSO732G0743 Papaver somniferum HOM05D006330 ORTHO05D008013 2.1e-79 300.1 179 84.4
MCO07G099 Micromonas commoda HOM05D006330 ORTHO05D008013 2.7e-71 273.1 240 60.0
HanXRQChr07g0198371 Helianthus annuus HOM05D006330 ORTHO05D008013 4.7e-71 272.3 195 72.8
Cre10.g428900 Chlamydomonas reinhardtii HOM05D006330 ORTHO05D008013 5.9e-66 255.4 244 59.0
PRCOL_00000451 Prasinoderma coloniale HOM05D006330 ORTHO05D008013 2.1e-55 220.3 298 44.3
CAN.G253.5 Capsicum annuum HOM05D006330 ORTHO05D008013 3.6e-55 219.5 130 84.6
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 2.6e-45 186.8 116 75.0
arahy.Tifrunner.gnm1.ann1.VBTZ6V Arachis hypogaea HOM05D006330 ORTHO05D008013 1.6e-39 167.5 112 73.2
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 1.0e-38 164.9 116 67.2
PSO675G8411 Papaver somniferum HOM05D006330 ORTHO05D008013 4.9e-36 156.0 95 75.8
Hma1.2p1_0161F.1_g071660 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 3.0e-33 146.7 89 80.9
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.2e-31 141.4 86 81.4
CDE04G0367 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 3.2e-27 126.7 95 67.4
BcaB06g26875 Brassica carinata HOM05D006330 ORTHO05D008013 2.4e-11 73.9 64 62.5
VMungo1383G2211 Vigna mungo HOM05D006330 ORTHO05D434633 4.6e-10 69.7 44 70.5
RcHm_v2.0_Chr5g0065021 Rosa chinensis HOM05D006330 ORTHO05D008013 1.3e-09 68.2 46 69.6


User provided reference genes

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