Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 0.0e+00 1121.7 567 100.0
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 9.6e-237 823.5 499 81.6
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 1.4e-227 793.1 507 79.1
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 1.5e-226 789.6 507 78.7
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 1.0e-225 786.9 507 78.5
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 5.2e-206 721.5 462 78.4
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 2.8e-204 715.7 462 77.9
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 7.0e-203 711.1 491 70.9
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 2.6e-202 709.1 493 71.4
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 3.8e-201 705.3 475 73.5
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 1.9e-200 703.0 485 71.8
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 4.7e-199 698.4 492 69.7
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 1.4e-198 696.8 493 70.0
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 1.3e-196 690.3 506 69.2
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 6.3e-196 688.0 494 70.4
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 1.1e-195 687.2 493 70.6
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 1.4e-195 686.8 493 68.2
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 1.4e-195 686.8 526 66.5
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 1.8e-195 686.4 476 71.2
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 2.4e-195 686.0 504 69.2
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 4.1e-195 685.3 476 71.0
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 5.3e-195 684.9 506 69.2
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 2.7e-194 682.6 495 69.5
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 2.2e-193 679.5 493 68.2
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 6.5e-193 677.9 493 68.8
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 4.7e-191 671.8 493 68.2
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 8.0e-191 671.0 493 67.7
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 1.0e-190 670.6 493 68.2
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 1.2e-189 667.2 463 69.3
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 7.5e-189 664.5 491 65.8
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 1.2e-186 657.1 495 66.9
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 3.5e-186 655.6 471 69.2
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 4.5e-186 655.2 491 67.8
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 8.6e-185 651.0 493 67.1
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 8.6e-185 651.0 491 67.0
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 4.0e-182 642.1 496 64.3
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 8.9e-182 641.0 493 65.5
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 2.0e-181 639.8 495 66.1
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 2.6e-181 639.4 487 67.1
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 2.6e-181 639.4 515 64.3
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 9.8e-181 637.5 512 64.5
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 4.9e-180 635.2 495 65.1
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 6.3e-180 634.8 495 65.1
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 2.4e-179 632.9 495 64.8
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 9.2e-179 630.9 497 64.8
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 1.7e-177 626.7 503 64.2
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 8.6e-177 624.4 486 64.6
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 1.6e-175 620.2 489 63.6
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 6.1e-175 618.2 507 62.5
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 1.4e-174 617.1 515 61.0
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 2.3e-174 616.3 469 67.2
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 4.0e-174 615.5 457 68.1
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 6.8e-174 614.8 493 63.5
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 8.9e-174 614.4 493 63.9
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 2.0e-173 613.2 518 61.8
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 3.4e-173 612.5 495 63.0
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 1.7e-172 610.1 492 63.2
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 2.2e-172 609.8 484 63.4
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 8.3e-172 607.8 485 63.3
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 1.1e-171 607.4 482 64.1
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 7.0e-171 604.7 483 62.3
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 7.0e-171 604.7 488 62.7
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 1.2e-170 604.0 516 59.1
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 2.7e-170 602.8 494 63.4
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 4.6e-170 602.1 488 62.9
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 3.0e-169 599.4 451 66.7
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 5.0e-169 598.6 493 62.5
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 1.1e-168 597.4 486 61.7
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 1.1e-168 597.4 483 62.7
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 2.5e-168 596.3 489 61.6
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 4.3e-168 595.5 479 63.9
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 5.6e-168 595.1 483 62.1
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 6.2e-167 591.7 448 66.5
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 6.8e-166 588.2 495 63.6
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 8.9e-166 587.8 495 60.4
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 8.9e-166 587.8 481 62.6
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 1.2e-165 587.4 491 60.9
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 1.5e-165 587.0 500 60.6
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 5.8e-165 585.1 499 59.3
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 1.3e-164 583.9 472 62.9
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 1.4e-163 580.5 472 62.7
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 4.1e-163 578.9 499 60.1
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 4.1e-163 578.9 499 60.1
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 1.2e-162 577.4 495 59.8
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 1.2e-162 577.4 504 60.9
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 6.0e-162 575.1 453 64.2
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 3.1e-158 562.8 439 66.1
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 2.2e-156 556.6 460 63.9
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 1.6e-154 550.4 500 57.0
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 2.7e-154 549.7 475 60.4
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 6.0e-154 548.5 486 57.6
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 3.6e-151 539.3 504 56.3
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 8.1e-151 538.1 487 58.5
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 7.1e-147 525.0 507 55.0
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 6.2e-143 511.9 515 54.4
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 9.0e-142 508.1 506 54.5
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 2.7e-138 496.5 481 56.8
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 6.0e-130 468.8 324 72.8
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 1.3e-127 461.1 502 52.2
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 3.2e-123 446.4 484 48.6
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 7.1e-123 445.3 568 45.4
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 3.5e-122 443.0 555 46.7
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 1.5e-120 437.6 354 65.3
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 6.2e-119 432.2 419 54.7
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 2.1e-114 417.2 408 56.6
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 3.1e-110 403.3 318 66.4
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 3.6e-106 389.8 359 58.5
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 2.9e-100 370.2 485 44.5
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 1.4e-99 367.9 294 65.0
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 8.8e-97 358.6 491 42.4
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 4.4e-72 276.6 356 48.0
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 9.2e-62 242.3 489 32.1
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 1.3e-60 238.4 137 80.3
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 9.5e-59 232.3 389 36.5
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 3.7e-47 193.7 796 25.0
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 6.2e-42 176.4 111 77.5
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 2.4e-38 164.5 335 31.6
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 1.6e-37 161.8 152 57.2
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 7.8e-37 159.5 137 66.4
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 2.6e-24 117.9 129 51.9
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 2.2e-23 114.8 66 78.8
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 7.4e-11 73.2 56 66.1
MD10G1121100 Malus domestica HOM05D006341 ORTHO05D000377 2.8e-10 71.2 46 76.1
arahy.Tifrunner.gnm1.ann1.UTA44Z Arachis hypogaea HOM05D006341 ORTHO05D000377 5.5e-06 57.0 31 74.2


User provided reference genes

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