Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G102200 Prunus persica HOM05D005190 ORTHO05D006183 1.1e-72 276.6 137 100.0
FAN07G0799 Fragaria x ananassa HOM05D005190 ORTHO05D006183 4.8e-65 251.1 137 89.8
MD13G1144000 Malus domestica HOM05D005190 ORTHO05D006183 6.2e-65 250.8 137 86.9
RcHm_v2.0_Chr4g0426821 Rosa chinensis HOM05D005190 ORTHO05D006183 8.1e-65 250.4 137 89.1
FAN17G1108 Fragaria x ananassa HOM05D000385 ORTHO05D006183 2.4e-64 248.8 135 89.6
FvH4_4g21210 Fragaria vesca HOM05D005190 ORTHO05D006183 5.3e-64 247.7 137 88.3
FAN12G1005 Fragaria x ananassa HOM05D005190 ORTHO05D006183 5.3e-64 247.7 137 88.3
Hma1.2p1_0013F.1_g007820 Hydrangea macrophylla HOM05D005190 ORTHO05D006183 1.3e-59 233.0 137 82.5
CSS0027522 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 1.8e-59 232.6 138 81.9
CSS0047604 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 1.8e-59 232.6 138 81.9
CsaV3_4G025830 Cucumis sativus L. HOM05D005190 ORTHO05D006183 3.0e-59 231.9 137 81.8
ClCG04G007440 Citrullus lanatus HOM05D005190 ORTHO05D006183 6.7e-59 230.7 137 81.0
Dinv09552 Davidia involucrata HOM05D005190 ORTHO05D006183 6.7e-59 230.7 139 82.0
Dinv10386 Davidia involucrata HOM05D005190 ORTHO05D006183 6.7e-59 230.7 139 82.0
Actinidia01056 Actinidia chinensis HOM05D005190 ORTHO05D006183 8.7e-59 230.3 137 79.6
Potri.015G036700 Populus trichocarpa HOM05D005190 ORTHO05D006183 2.5e-58 228.8 137 83.9
MELO3C006747.2 Cucumis melo HOM05D005190 ORTHO05D006183 4.3e-58 228.0 137 83.2
Sabra15G0031200 Salix brachista HOM05D005190 ORTHO05D006183 7.4e-58 227.3 137 83.2
CsaV3_3G015480 Cucumis sativus L. HOM05D005190 ORTHO05D006183 2.1e-57 225.7 137 81.8
Sed0026997 Sechium edule HOM05D005190 ORTHO05D006183 2.8e-57 225.3 137 79.6
TWI38G0007 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 4.8e-57 224.6 137 83.2
TAR629G3462 Trochodendron aralioides HOM05D005190 ORTHO05D006183 6.2e-57 224.2 138 79.0
Manes.17G016100 Manihot esculenta HOM05D005190 ORTHO05D006183 1.4e-56 223.0 137 82.5
PGR044G0309 Punica granatum HOM05D005190 ORTHO05D006183 1.8e-56 222.6 137 77.4
CANSAT35G0272 Cannabis sativa HOM05D005190 ORTHO05D006183 3.1e-56 221.9 137 81.8
CiPaw.01G130900 Carya illinoinensis HOM05D005190 ORTHO05D006183 3.1e-56 221.9 134 83.6
Potri.012G045500 Populus trichocarpa HOM05D005190 ORTHO05D006183 3.1e-56 221.9 137 79.6
Sabra12G0031600 Salix brachista HOM05D005190 ORTHO05D006183 5.3e-56 221.1 137 79.6
GSVIVG01017663001 Vitis vinifera HOM05D005190 ORTHO05D006183 5.3e-56 221.1 137 78.1
Duzib235G0490 Durio zibethinus HOM05D005190 ORTHO05D006183 6.9e-56 220.7 137 80.3
Rhsim04G0247000 Rhododendron simsii HOM05D005190 ORTHO05D006183 6.9e-56 220.7 138 79.0
GSVIVG01017602001 Vitis vinifera HOM05D005190 ORTHO05D006183 1.2e-55 219.9 137 78.1
QL06p013825 Quercus lobata HOM05D005190 ORTHO05D006183 1.5e-55 219.5 136 80.9
Cfa006455 Carpinus fangiana HOM05D005190 ORTHO05D006183 5.8e-55 217.6 134 80.6
Lalb_Chr13g0298851 Lupinus albus HOM05D005190 ORTHO05D006183 5.8e-55 217.6 138 76.8
arahy.Tifrunner.gnm1.ann1.JER3JH Arachis hypogaea HOM05D005190 ORTHO05D006183 1.7e-54 216.1 138 76.8
Glyma.16G146000 Glycine max HOM05D005190 ORTHO05D006183 2.2e-54 215.7 135 80.0
HanXRQChr06g0166421 Helianthus annuus HOM05D005190 ORTHO05D006183 2.9e-54 215.3 138 76.8
ATR0730G183 Amborella trichopoda HOM05D005190 ORTHO05D006183 3.8e-54 214.9 137 77.4
TPR.G12566 Trifolium pratense HOM05D005190 ORTHO05D006183 4.9e-54 214.5 139 76.3
Haze_00795 Corylus avellana HOM05D005582 ORTHO05D007028 6.5e-54 214.2 134 79.9
Oeu009981.1 Olea europaea HOM05D005190 ORTHO05D006183 8.4e-54 213.8 137 78.1
Peaxi162Scf00074g00538 Petunia axillaris HOM05D005190 ORTHO05D006183 8.4e-54 213.8 137 75.2
Ca_02362_v3 Cicer arietinum L. HOM05D005190 ORTHO05D006183 1.1e-53 213.4 138 79.0
Gohir.A06G195300 Gossypium hirsutum HOM05D005190 ORTHO05D006183 1.1e-53 213.4 138 76.8
arahy.Tifrunner.gnm1.ann1.CG6LTA Arachis hypogaea HOM05D005190 ORTHO05D006183 1.4e-53 213.0 138 75.4
Lalb_Chr07g0181821 Lupinus albus HOM05D005190 ORTHO05D006183 1.4e-53 213.0 138 76.8
Nn3g18945 Nelumbo nucifera HOM05D005190 ORTHO05D006183 1.4e-53 213.0 137 77.4
Thecc.06G136600 Theobroma cacao HOM05D005190 ORTHO05D006183 1.4e-53 213.0 137 78.8
Ciclev10006189m.g Citrus clementina HOM05D005190 ORTHO05D006183 1.9e-53 212.6 137 75.9
TAR636G2254 Trochodendron aralioides HOM05D005190 ORTHO05D006183 1.9e-53 212.6 133 80.5
Phvul.004G071200 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 2.5e-53 212.2 134 77.6
TPR.G22255 Trifolium pratense HOM05D005190 ORTHO05D006183 2.5e-53 212.2 138 75.4
arahy.Tifrunner.gnm1.ann1.R3ADAS Arachis hypogaea HOM05D005190 ORTHO05D006183 3.2e-53 211.8 131 78.6
MSTRG.12184 Avicennia marina HOM05D005190 ORTHO05D006183 3.2e-53 211.8 137 78.1
Duzib192G0082 Durio zibethinus HOM05D005190 ORTHO05D006183 3.2e-53 211.8 137 75.9
Gohir.D06G202900 Gossypium hirsutum HOM05D005190 ORTHO05D006183 3.2e-53 211.8 138 76.1
Gorai.010G236800 Gossypium raimondii HOM05D005190 ORTHO05D006183 3.2e-53 211.8 138 76.1
TWI63G0483 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 3.2e-53 211.8 138 79.0
arahy.Tifrunner.gnm1.ann1.W6NXGM Arachis hypogaea HOM05D005190 ORTHO05D006183 4.2e-53 211.5 137 76.6
Cpa.g.sc146.40 Carica papaya HOM05D005190 ORTHO05D006183 7.1e-53 210.7 132 77.3
DCAR_006510 Daucus carota HOM05D005190 ORTHO05D006183 7.1e-53 210.7 137 73.7
Phvul.004G071300 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 7.1e-53 210.7 134 76.1
HPP92_019515 Vanilla planifolia HOM05D005190 ORTHO05D006183 1.2e-52 209.9 137 73.7
Glyma.02G064900 Glycine max HOM05D005190 ORTHO05D006183 2.1e-52 209.1 135 78.5
Cc07_g19070 Coffea canephora HOM05D005190 ORTHO05D006183 2.7e-52 208.8 137 75.2
Lj4g0016109 Lotus japonicus HOM05D005190 ORTHO05D006183 2.7e-52 208.8 139 74.8
MBI19_g06603_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 3.5e-52 208.4 137 73.7
PGSC0003DMG400012133 Solanum tuberosum HOM05D005190 ORTHO05D006183 3.5e-52 208.4 137 75.2
Psat0ss1196g0480 Pisum sativum HOM05D005190 ORTHO05D006183 7.9e-52 207.2 134 76.1
Medtr7g096570 Medicago truncatula HOM05D005190 ORTHO05D006183 1.0e-51 206.8 139 73.4
ECA246G1588 Erigeron canadensis HOM05D005190 ORTHO05D006183 1.3e-51 206.5 132 75.0
Lsat_1_v5_gn_3_12780 Lactuca sativa HOM05D005190 ORTHO05D006183 3.9e-51 204.9 137 73.7
SGA_v2.0_scaffold36G14289 Striga asiatica HOM05D005190 ORTHO05D006183 3.9e-51 204.9 137 75.9
MD13G1143900 Malus domestica HOM05D005190 ORTHO05D006183 8.7e-51 203.8 113 87.6
Solyc08g082740.4 Solanum lycopersicum HOM05D005190 ORTHO05D006183 1.9e-50 202.6 137 73.7
Sopen08g030970 Solanum pennellii HOM05D005190 ORTHO05D006183 1.9e-50 202.6 137 73.7
Sc06g0001490 Simmondsia chinensis HOM05D005190 ORTHO05D006183 2.5e-50 202.2 134 74.6
Migut.N00575 Erythranthe guttata HOM05D005190 ORTHO05D006183 4.3e-50 201.4 143 71.3
HanXRQChr17g0534691 Helianthus annuus HOM05D005190 ORTHO05D006183 9.7e-50 200.3 138 73.2
THA.LOC104800562 Tarenaya hassleriana HOM05D005190 ORTHO05D006183 9.7e-50 200.3 138 74.6
COL.COLO4_30940 Corchorus olitorius HOM05D005190 ORTHO05D006183 1.3e-49 199.9 147 72.8
Nitab4.5_0002367g0140 Nicotiana tabacum HOM05D005190 ORTHO05D006183 1.6e-49 199.5 137 71.5
CAN.G567.34 Capsicum annuum HOM05D005190 ORTHO05D006183 4.8e-49 198.0 137 72.3
SGA_v2.0_scaffold198G41066 Striga asiatica HOM05D005190 ORTHO05D006183 2.4e-48 195.7 137 72.3
Nitab4.5_0002793g0070 Nicotiana tabacum HOM05D005190 ORTHO05D006183 3.1e-48 195.3 137 70.8
BcaC05g27594 Brassica carinata HOM05D005190 ORTHO05D006183 4.1e-48 194.9 146 70.5
A05p21200 Brassica napus HOM05D005190 ORTHO05D006183 4.1e-48 194.9 146 70.5
C05p35790 Brassica napus HOM05D005190 ORTHO05D006183 4.1e-48 194.9 146 70.5
BraA05t21026Z Brassica rapa HOM05D005190 ORTHO05D006183 4.1e-48 194.9 146 70.5
Os06g0342100 Oryza sativa ssp. japonica HOM05D005190 ORTHO05D006183 5.3e-48 194.5 131 74.0
SalBow4G3050 Salvia bowleyana HOM05D005190 ORTHO05D006183 5.3e-48 194.5 137 69.3
Lsat_1_v5_gn_6_83381 Lactuca sativa HOM05D005190 ORTHO05D006183 2.0e-47 192.6 119 73.1
SEGI_18361 Sequoiadendron giganteum HOM05D005190 ORTHO05D006183 2.0e-47 192.6 139 69.8
AUR62002533 Chenopodium quinoa HOM05D005190 ORTHO05D006183 5.9e-47 191.0 137 66.4
BcaB04g17462 Brassica carinata HOM05D005190 ORTHO05D006183 7.7e-47 190.7 115 78.3
AUR62023660 Chenopodium quinoa HOM05D005190 ORTHO05D006183 7.7e-47 190.7 138 68.8
EL10Ac3g06230 Beta vulgaris HOM05D005190 ORTHO05D006183 1.0e-46 190.3 137 65.7
AT1G48160 Arabidopsis thaliana HOM05D005190 ORTHO05D006183 1.3e-46 189.9 115 78.3
Aa31LG10G5580 Aethionema arabicum HOM05D005190 ORTHO05D006183 2.2e-46 189.1 114 79.8
AL8G32340 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 2.2e-46 189.1 115 77.4
Carub.0001s3725 Capsella rubella HOM05D005190 ORTHO05D006183 2.2e-46 189.1 114 78.1
Thhalv10011800m.g Eutrema salsugineum HOM05D005190 ORTHO05D006183 2.9e-46 188.7 114 78.1
Zm00001eb066670 Zea mays HOM05D005190 ORTHO05D006183 6.5e-46 187.6 130 70.0
Zm00001eb081370 Zea mays HOM05D005190 ORTHO05D006183 6.5e-46 187.6 130 70.0
Sp1g35120 Schrenkiella parvula HOM05D005190 ORTHO05D006183 8.5e-46 187.2 115 76.5
AL1G54730 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 1.9e-45 186.0 114 76.3
BcaC07g37169 Brassica carinata HOM05D005190 ORTHO05D006183 4.2e-45 184.9 108 79.6
C08p05420 Brassica napus HOM05D005190 ORTHO05D006183 4.2e-45 184.9 108 79.6
BolC8t47359H Brassica oleracea HOM05D005190 ORTHO05D006183 4.2e-45 184.9 108 79.6
A08p05180 Brassica napus HOM05D005190 ORTHO05D006183 5.5e-45 184.5 108 79.6
BraA08t32536Z Brassica rapa HOM05D005190 ORTHO05D006183 5.5e-45 184.5 108 79.6
Pp3c3_17800 Physcomitrium patens HOM05D005190 ORTHO05D006183 1.6e-44 183.0 138 68.8
CARHR037790 Cardamine hirsuta HOM05D005190 ORTHO05D006183 3.0e-43 178.7 108 76.9
BolC5t32295H Brassica oleracea HOM05D005190 ORTHO05D006183 3.9e-43 178.3 108 76.9
PSO782G1806 Papaver somniferum HOM05D005190 ORTHO05D006183 8.8e-43 177.2 120 68.3
PSO478G2609 Papaver somniferum HOM05D005190 ORTHO05D006183 3.3e-42 175.3 118 68.6
TPR.G39662 Trifolium pratense HOM05D005190 ORTHO05D006183 3.3e-42 175.3 120 77.5
Mapoly0004s0269 Marchantia polymorpha HOM05D005190 ORTHO05D006183 9.1e-40 167.2 133 65.4
unitig_747.g21355 Utricularia gibba HOM05D001490 ORTHO05D001450 2.5e-37 159.1 137 62.8
TPR.G16114 Trifolium pratense HOM05D005190 ORTHO05D006183 3.0e-35 152.1 98 68.4
AagrBONN_evm.TU.Sc2ySwM_362.2360 Anthoceros agrestis HOM05D005190 ORTHO05D006183 1.1e-34 150.2 136 57.4
Ah.07g203500 Amaranthus hybridus HOM05D005190 ORTHO05D006183 2.2e-33 146.0 93 68.8
BcaC08g43007 Brassica carinata HOM05D005190 ORTHO05D006183 1.8e-32 142.9 86 75.6
arahy.Tifrunner.gnm1.ann1.AFL9DX Arachis hypogaea HOM05D005190 ORTHO05D006183 4.1e-32 141.7 118 65.3
CBR_g39024 Chara braunii HOM05D005190 ORTHO05D006183 1.7e-30 136.3 132 56.1
SMO352G0034 Selaginella moellendorffii HOM05D005190 ORTHO05D006183 1.9e-29 132.9 123 57.7
MBI07_g26367_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 2.5e-29 132.5 127 55.1
C06p02560 Brassica napus HOM05D005190 ORTHO05D006183 3.6e-28 128.6 112 58.0
Dinv29526 Davidia involucrata HOM05D005190 ORTHO05D006183 3.3e-26 122.1 75 82.7
BcaC01g01495 Brassica carinata HOM05D005190 ORTHO05D006183 2.8e-25 119.0 136 53.7
vmacro08000 Vaccinium macrocarpon HOM05D005190 ORTHO05D006183 6.3e-25 117.9 81 79.0
Eucgr.G02037 Eucalyptus grandis HOM05D005190 ORTHO05D006183 1.8e-24 116.3 67 73.1
ClCG05G006830 Citrullus lanatus HOM05D005190 ORTHO05D006183 5.3e-24 114.8 59 83.1
MCO01G268 Micromonas commoda HOM05D005190 ORTHO05D006183 2.9e-22 109.0 102 53.9
Aqoxy2G01813 Aquilegia oxysepala HOM05D005190 ORTHO05D006183 5.5e-21 104.8 70 80.0
Cre02.g095070 Chlamydomonas reinhardtii HOM05D005190 ORTHO05D006183 2.7e-20 102.4 151 41.1
Haze_12814 Corylus avellana HOM05D000165 ORTHO05D001328 8.0e-20 100.9 70 65.7
CDE05G0439 Ceratophyllum demersum HOM05D005190 ORTHO05D006183 5.2e-19 98.2 75 64.0
BolC6t35384H Brassica oleracea HOM05D005190 ORTHO05D006183 3.4e-18 95.5 59 71.2
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 4.4e-18 95.1 84 58.3
RcHm_v2.0_Chr7g0219311 Rosa chinensis HOM05D005190 ORTHO05D006183 6.3e-17 91.3 59 69.5
Atru.chr4.92 Acer truncatum HOM05D005190 ORTHO05D006183 1.7e-14 83.2 56 75.0
Cfa023211 Carpinus fangiana HOM05D005190 ORTHO05D006183 6.1e-12 74.7 105 38.1
MELO3C033488.2 Cucumis melo HOM05D005190 ORTHO05D006183 1.4e-11 73.6 79 58.2
EL10As1g23068 Beta vulgaris HOM05D005190 ORTHO05D006183 3.0e-11 72.4 77 49.4
PRCOL_00001126 Prasinoderma coloniale HOM05D005190 ORTHO05D006183 6.8e-11 71.2 140 38.6
MD13G1001700 Malus domestica HOM05D005190 ORTHO05D006183 1.2e-10 70.5 77 51.9
CSS0036753 Camellia sinensis var. sinensis HOM05D008986 ORTHO05D113366 3.8e-06 55.5 39 82.1


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