Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G089600 Prunus persica HOM05D004650 ORTHO05D005715 1.4e-141 506.5 312 100.0
MD10G1067900 Malus domestica HOM05D004650 ORTHO05D005715 9.7e-98 360.9 314 66.2
MD05G1059700 Malus domestica HOM05D004650 ORTHO05D005715 8.2e-97 357.8 313 66.8
RcHm_v2.0_Chr6g0266121 Rosa chinensis HOM05D004650 ORTHO05D005715 8.3e-81 304.7 309 59.5
FAN24G0050 Fragaria x ananassa HOM05D004650 ORTHO05D005715 1.6e-79 300.4 309 58.9
FAN20G2064 Fragaria x ananassa HOM05D004650 ORTHO05D005715 7.8e-79 298.1 309 58.3
FAN15G0405 Fragaria x ananassa HOM05D004650 ORTHO05D005715 5.0e-78 295.4 309 57.6
FAN10G4111 Fragaria x ananassa HOM05D004650 ORTHO05D005715 6.6e-78 295.0 309 58.3
FvH4_7g12280 Fragaria vesca HOM05D004650 ORTHO05D005715 3.3e-77 292.7 309 57.9
FvH4_2g09800 Fragaria vesca HOM05D004650 ORTHO05D005715 4.3e-77 292.4 295 59.7
FAN10G1385 Fragaria x ananassa HOM05D004650 ORTHO05D005715 1.6e-76 290.4 309 57.6
FAN27G3342 Fragaria x ananassa HOM05D004650 ORTHO05D005715 1.4e-72 277.3 309 55.3
CiPaw.06G132000 Carya illinoinensis HOM05D004650 ORTHO05D005715 1.8e-72 276.9 314 54.1
Prupe.8G095100 Prunus persica HOM05D004650 ORTHO05D005715 3.4e-66 256.1 269 60.2
QL11p045374 Quercus lobata HOM05D004650 ORTHO05D005715 7.5e-66 255.0 312 52.9
TWI75G0911 Tripterygium wilfordii HOM05D004650 ORTHO05D005715 9.2e-64 248.1 312 50.3
Cfa005063 Carpinus fangiana HOM05D004650 ORTHO05D005715 6.0e-63 245.4 334 48.2
Cpa.g.sc150.59 Carica papaya HOM05D004650 ORTHO05D005715 1.0e-62 244.6 317 50.2
GSVIVG01024222001 Vitis vinifera HOM05D004650 ORTHO05D005715 3.9e-62 242.7 315 46.0
Gohir.D13G029900 Gossypium hirsutum HOM05D004650 ORTHO05D005715 1.5e-61 240.7 314 49.7
Haze_02320 Corylus avellana HOM05D004650 ORTHO05D005715 1.9e-61 240.4 336 47.9
Potri.009G120900 Populus trichocarpa HOM05D004650 ORTHO05D005715 1.9e-61 240.4 316 46.8
Gorai.013G034200 Gossypium raimondii HOM05D004650 ORTHO05D005715 1.2e-60 237.7 314 49.4
Lj5C193G19 Lonicera japonica HOM05D004650 ORTHO05D005715 6.2e-60 235.3 316 47.8
Thecc.02G079400 Theobroma cacao HOM05D004650 ORTHO05D005715 4.4e-58 229.2 316 48.1
Rhsim11G0181000 Rhododendron simsii HOM05D004650 ORTHO05D005715 7.5e-58 228.4 314 46.8
TAR633G2180 Trochodendron aralioides HOM05D004650 ORTHO05D005715 7.5e-58 228.4 316 46.5
Ciclev10027768m.g Citrus clementina HOM05D004650 ORTHO05D005715 1.3e-57 227.6 315 47.3
COL.COLO4_26001 Corchorus olitorius HOM05D004650 ORTHO05D005715 2.2e-57 226.9 314 46.8
Manes.04G086301 Manihot esculenta HOM05D004650 ORTHO05D005715 2.9e-57 226.5 314 48.1
Glyma.13G201700 Glycine max HOM05D004650 ORTHO05D005715 3.7e-57 226.1 312 45.2
CSS0049841 Camellia sinensis var. sinensis HOM05D004650 ORTHO05D005715 1.4e-56 224.2 314 45.5
vmacro02074 Vaccinium macrocarpon HOM05D004650 ORTHO05D005715 2.4e-56 223.4 314 45.9
Phvul.011G210900 Phaseolus vulgaris HOM05D004650 ORTHO05D005715 4.6e-55 219.2 313 45.4
VMungo1127G0931 Vigna mungo HOM05D004650 ORTHO05D005715 7.8e-55 218.4 312 45.2
arahy.Tifrunner.gnm1.ann1.EM89X0 Arachis hypogaea HOM05D004650 ORTHO05D005715 2.3e-54 216.9 317 44.8
arahy.Tifrunner.gnm1.ann1.JDK4IY Arachis hypogaea HOM05D004650 ORTHO05D005715 3.0e-54 216.5 317 45.1
Glyma.12G236300 Glycine max HOM05D004650 ORTHO05D005715 3.9e-54 216.1 312 43.6
Atru.chr5.3088 Acer truncatum HOM05D004650 ORTHO05D005715 1.5e-53 214.2 315 44.4
Medtr1g080390 Medicago truncatula HOM05D004650 ORTHO05D005715 1.5e-53 214.2 314 44.3
Ca_23900_v3 Cicer arietinum L. HOM05D004650 ORTHO05D005715 1.9e-53 213.8 313 52.4
Gohir.A13G019000 Gossypium hirsutum HOM05D004650 ORTHO05D005715 2.5e-53 213.4 314 53.8
TPR.G3476 Trifolium pratense HOM05D004650 ORTHO05D005715 2.5e-53 213.4 314 46.2
ClCG02G004760 Citrullus lanatus HOM05D004650 ORTHO05D005715 5.6e-53 212.2 319 45.1
Eucgr.I01295 Eucalyptus grandis HOM05D004650 ORTHO05D005715 2.8e-52 209.9 319 44.2
Nitab4.5_0009512g0020 Nicotiana tabacum HOM05D004650 ORTHO05D005715 2.8e-52 209.9 328 45.7
Nitab4.5_0003234g0030 Nicotiana tabacum HOM05D004650 ORTHO05D005715 8.1e-52 208.4 328 50.0
ECA236G4812 Erigeron canadensis HOM05D004650 ORTHO05D005715 1.1e-51 208.0 317 44.2
Nn5g29730 Nelumbo nucifera HOM05D004650 ORTHO05D005715 1.1e-51 208.0 324 45.4
Sabra09G0093300 Salix brachista HOM05D004650 ORTHO05D005715 1.4e-51 207.6 303 44.6
Lalb_Chr19g0132251 Lupinus albus HOM05D004650 ORTHO05D005715 5.2e-51 205.7 314 44.3
Psat2g040720 Pisum sativum HOM05D004650 ORTHO05D005715 8.9e-51 204.9 311 43.1
MSTRG.5411 Avicennia marina HOM05D004650 ORTHO05D005715 1.2e-50 204.5 312 42.9
Sopen01g052180 Solanum pennellii HOM05D004650 ORTHO05D005715 1.2e-50 204.5 312 42.6
Peaxi162Scf00016g00358 Petunia axillaris HOM05D004650 ORTHO05D005715 5.8e-50 202.2 311 49.2
Hund11840 Selenicereus undatus HOM05D004650 ORTHO05D005715 5.8e-50 202.2 318 51.3
CANSAT11G1974 Cannabis sativa HOM05D004650 ORTHO05D005715 1.7e-49 200.7 315 43.8
CsaV3_7G000160 Cucumis sativus L. HOM05D004650 ORTHO05D005715 3.8e-49 199.5 318 42.5
Lalb_Chr03g0034141 Lupinus albus HOM05D004650 ORTHO05D005715 4.9e-49 199.1 314 42.0
EL10Ac3g05863 Beta vulgaris HOM05D004650 ORTHO05D005715 8.4e-49 198.4 316 44.3
AUR62002225 Chenopodium quinoa HOM05D004650 ORTHO05D005715 2.4e-48 196.8 314 42.7
SalBow3G4209 Salvia bowleyana HOM05D004650 ORTHO05D005715 2.4e-48 196.8 315 43.8
Lsat_1_v5_gn_7_91680 Lactuca sativa HOM05D004650 ORTHO05D005715 3.2e-48 196.4 314 42.7
MELO3C013443.2 Cucumis melo HOM05D004650 ORTHO05D005715 4.1e-48 196.1 320 40.9
DCAR_023026 Daucus carota HOM05D004650 ORTHO05D005715 1.7e-46 190.7 316 43.0
HanXRQChr16g0505091 Helianthus annuus HOM05D004650 ORTHO05D005715 1.7e-46 190.7 312 42.6
Cc02_g17180 Coffea canephora HOM05D004650 ORTHO05D005715 2.3e-46 190.3 315 41.9
Aqoxy5G01524 Aquilegia oxysepala HOM05D004650 ORTHO05D005715 8.6e-46 188.3 322 41.6
PGR142G2793 Punica granatum HOM05D004650 ORTHO05D005715 8.6e-46 188.3 318 44.7
AL4G10620 Arabidopsis lyrata HOM05D004650 ORTHO05D005715 3.3e-45 186.4 312 42.3
Oeu050697.1 Olea europaea HOM05D004650 ORTHO05D005715 2.8e-44 183.3 311 43.1
Aqoxy4G02770 Aquilegia oxysepala HOM05D004650 ORTHO05D005715 4.7e-44 182.6 318 42.5
Lj1g0020880 Lotus japonicus HOM05D004650 ORTHO05D005715 1.1e-43 181.4 316 40.5
Sed0015033 Sechium edule HOM05D004650 ORTHO05D005715 4.0e-43 179.5 353 38.0
AUR62015438 Chenopodium quinoa HOM05D004650 ORTHO05D005715 1.5e-42 177.6 322 41.3
A09p58230 Brassica napus HOM05D004650 ORTHO05D005715 2.0e-42 177.2 318 48.4
Carub.0004s0049 Capsella rubella HOM05D004650 ORTHO05D005715 3.4e-42 176.4 315 41.3
Sp4g00610 Schrenkiella parvula HOM05D004650 ORTHO05D005715 3.4e-42 176.4 320 41.2
BcaC07g41146 Brassica carinata HOM05D004650 ORTHO05D005715 7.6e-42 175.3 316 39.9
BraA09t41211Z Brassica rapa HOM05D004650 ORTHO05D005715 7.6e-42 175.3 318 39.9
Aa31LG3G140 Aethionema arabicum HOM05D004650 ORTHO05D005715 9.9e-42 174.9 318 39.0
C08p41530 Brassica napus HOM05D004650 ORTHO05D005715 6.4e-41 172.2 318 39.3
BolC8t51714H Brassica oleracea HOM05D004650 ORTHO05D005715 6.4e-41 172.2 318 39.3
CARHR112350 Cardamine hirsuta HOM05D004650 ORTHO05D005715 8.4e-41 171.8 320 39.4
AT2G21440 Arabidopsis thaliana HOM05D004650 ORTHO05D005715 1.4e-40 171.0 313 40.6
BraA04t17255Z Brassica rapa HOM05D004650 ORTHO05D005715 7.1e-40 168.7 312 39.7
A04p16150 Brassica napus HOM05D004650 ORTHO05D005715 2.1e-39 167.2 318 39.6
MBI03_g33031_MAGBIO Magnolia biondii HOM05D004650 ORTHO05D005715 1.0e-38 164.9 316 39.6
FAN03G0917 Fragaria x ananassa HOM05D004650 ORTHO05D005715 5.1e-38 162.5 110 75.5
FvH4_7g06403 Fragaria vesca HOM05D004650 ORTHO05D005715 1.1e-37 161.4 121 71.1
TPR.G23542 Trifolium pratense HOM05D004650 ORTHO05D005715 2.5e-37 160.2 321 38.9
PSO675G4364 Papaver somniferum HOM05D004650 ORTHO05D005715 4.3e-37 159.5 328 37.2
THA.LOC104806024 Tarenaya hassleriana HOM05D004650 ORTHO05D005715 9.6e-37 158.3 115 69.6
FAN06G0733 Fragaria x ananassa HOM05D004650 ORTHO05D005715 1.6e-36 157.5 143 62.2
Gohir.A03G197200 Gossypium hirsutum HOM05D004650 ORTHO05D005715 1.1e-35 154.8 126 64.3
PSO541G1340 Papaver somniferum HOM05D004650 ORTHO05D005715 6.9e-35 152.1 311 37.3
BcaC02g08791 Brassica carinata HOM05D004650 ORTHO05D005715 7.6e-34 148.7 315 36.8
Thhalv10023293m.g Eutrema salsugineum HOM05D004650 ORTHO05D005715 9.9e-34 148.3 102 69.6
C04p50630 Brassica napus HOM05D004650 ORTHO05D005715 1.7e-33 147.5 154 54.5
FAN10G1169 Fragaria x ananassa HOM05D004650 ORTHO05D005715 1.7e-33 147.5 94 78.7
Migut.G00750 Erythranthe guttata HOM05D004650 ORTHO05D005715 3.8e-33 146.4 337 48.4
Sc08g0000680 Simmondsia chinensis HOM05D004650 ORTHO05D005715 6.0e-31 139.0 155 56.8
SHI01140 Sapria himalayana HOM05D004650 ORTHO05D005715 9.6e-29 131.7 144 52.8
SEGI_17742 Sequoiadendron giganteum HOM05D004650 ORTHO05D005715 2.8e-28 130.2 147 53.7
SEGI_24468 Sequoiadendron giganteum HOM05D004650 ORTHO05D005715 5.3e-27 125.9 349 41.3
Pp3c11_7560 Physcomitrium patens HOM05D004650 ORTHO05D005715 4.5e-26 122.9 335 31.9
Zm00001eb212720 Zea mays HOM05D004650 ORTHO05D005715 4.9e-25 119.4 150 49.3
Gohir.D02G218566 Gossypium hirsutum HOM05D004650 ORTHO05D005715 1.6e-23 114.4 155 49.7
Os03g0824300 Oryza sativa ssp. japonica HOM05D004650 ORTHO05D005715 4.6e-23 112.8 166 42.8
Lsat_1_v5_gn_6_14381 Lactuca sativa HOM05D004650 ORTHO05D005715 2.3e-22 110.5 70 77.1
Os03g0801800 Oryza sativa ssp. japonica HOM05D004650 ORTHO05D005715 8.7e-22 108.6 312 33.7
Mapoly0009s0044 Marchantia polymorpha HOM05D004650 ORTHO05D005715 1.5e-21 107.8 145 48.3
CDE02G0935 Ceratophyllum demersum HOM05D004650 ORTHO05D005715 3.3e-21 106.7 73 74.0
Actinidia11754 Actinidia chinensis HOM05D004650 ORTHO05D005715 1.8e-19 100.9 62 80.6
SMO203G0028 Selaginella moellendorffii HOM05D004650 ORTHO05D005715 6.9e-19 99.0 320 37.5
PSO170G5257 Papaver somniferum HOM05D004650 ORTHO05D005715 2.9e-17 93.6 105 46.7
SGA_v2.0_scaffold4257G54456 Striga asiatica HOM05D004650 ORTHO05D005715 6.5e-17 92.4 242 29.3
HPP92_025379 Vanilla planifolia HOM05D004650 ORTHO05D005715 1.4e-16 91.3 283 30.0
AagrBONN_evm.TU.Sc2ySwM_369.318 Anthoceros agrestis HOM05D004650 ORTHO05D005715 1.9e-16 90.9 70 68.6
CBR_g29474 Chara braunii HOM05D004650 ORTHO05D005715 4.2e-16 89.7 97 51.5
Cre02.g104650 Chlamydomonas reinhardtii HOM05D004650 ORTHO05D005715 3.5e-15 86.7 137 42.3
PRCOL_00006869 Prasinoderma coloniale HOM05D004650 ORTHO05D005715 2.3e-14 84.0 119 42.0
Actinidia22185 Actinidia chinensis HOM05D003558 ORTHO05D005715 1.9e-13 80.9 194 36.1
CAN.G542.9 Capsicum annuum HOM05D002907 ORTHO05D005554 3.7e-12 76.6 112 41.1
PSO832G0491 Papaver somniferum HOM05D004931 ORTHO05D006579 1.3e-09 68.2 74 45.9
Actinidia02388 Actinidia chinensis HOM05D004650 ORTHO05D005715 5.5e-08 62.8 40 77.5


User provided reference genes

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