Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 2.0e-101 372.5 192 100.0
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 7.4e-80 300.8 191 79.6
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 2.1e-79 299.3 191 79.6
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 3.7e-79 298.5 191 78.5
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 4.8e-79 298.1 193 81.9
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 9.0e-78 293.9 190 78.4
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 9.0e-78 293.9 191 78.0
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 1.2e-77 293.5 189 81.0
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 4.5e-77 291.6 191 80.1
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 4.5e-77 291.6 192 80.2
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 1.7e-76 289.7 189 79.9
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 2.9e-76 288.9 191 77.5
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 6.4e-76 287.7 191 77.5
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 6.4e-76 287.7 191 77.5
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 1.1e-75 287.0 191 76.4
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 1.2e-74 283.5 191 78.0
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 2.7e-74 282.3 191 77.0
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 3.5e-74 282.0 190 77.4
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 2.3e-73 279.3 191 78.0
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 3.9e-73 278.5 191 77.5
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 1.5e-72 276.6 190 73.2
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 1.5e-72 276.6 190 73.2
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 1.5e-72 276.6 189 75.1
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 1.9e-72 276.2 191 78.5
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 2.5e-72 275.8 192 78.1
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 2.5e-72 275.8 191 74.9
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 1.6e-71 273.1 194 71.1
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 2.1e-71 272.7 191 77.5
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 3.1e-70 268.9 190 72.1
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 6.9e-70 267.7 193 76.7
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 6.9e-70 267.7 191 73.3
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 1.2e-69 266.9 192 74.0
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 1.3e-68 263.5 191 73.8
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 1.4e-67 260.0 171 79.5
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 2.5e-67 259.2 241 62.2
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 3.2e-67 258.8 193 74.6
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 4.2e-67 258.5 195 74.4
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 5.5e-67 258.1 188 71.8
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 7.1e-67 257.7 193 74.1
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 9.3e-67 257.3 194 75.3
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 3.9e-65 251.9 192 69.8
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 5.1e-65 251.5 183 72.7
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 2.5e-64 249.2 194 67.0
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 5.7e-64 248.1 195 71.8
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 7.4e-64 247.7 193 69.9
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 9.7e-64 247.3 196 68.9
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 9.7e-64 247.3 193 69.9
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 1.3e-63 246.9 193 69.9
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 1.3e-63 246.9 192 71.9
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 8.2e-63 244.2 194 67.5
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 5.3e-62 241.5 194 70.1
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 4.5e-61 238.4 192 69.3
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 5.9e-61 238.0 193 65.3
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 7.6e-61 237.7 190 65.3
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 7.6e-61 237.7 191 67.5
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 1.0e-60 237.3 194 64.4
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 1.3e-60 236.9 194 66.5
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 1.7e-60 236.5 196 66.3
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 2.9e-60 235.7 188 67.0
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 3.8e-60 235.3 194 65.5
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 5.0e-60 235.0 197 68.0
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 6.5e-60 234.6 179 72.1
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 1.4e-59 233.4 197 66.0
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 3.2e-59 232.3 193 65.8
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 7.2e-59 231.1 183 68.3
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 9.4e-59 230.7 193 68.9
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 1.6e-58 229.9 190 63.2
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 1.4e-57 226.9 191 66.5
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 2.3e-57 226.1 193 64.8
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 3.0e-57 225.7 193 67.4
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 3.9e-57 225.3 194 63.9
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 3.9e-57 225.3 193 63.2
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 6.7e-57 224.6 190 61.1
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 8.8e-57 224.2 190 64.2
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 1.1e-56 223.8 193 63.7
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 3.7e-55 218.8 180 66.1
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 4.8e-55 218.4 190 60.5
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 4.1e-54 215.3 190 62.1
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 5.3e-54 214.9 145 74.5
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 1.5e-53 213.4 190 59.5
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 1.3e-52 210.3 197 58.9
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 1.3e-52 210.3 196 62.8
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 2.2e-52 209.5 169 66.3
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 3.8e-52 208.8 196 59.7
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 1.9e-51 206.5 197 58.4
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 9.4e-51 204.1 197 59.9
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 2.7e-50 202.6 191 60.2
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 3.6e-50 202.2 200 59.0
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 4.7e-50 201.8 204 55.4
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 6.1e-50 201.4 191 60.2
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 6.1e-50 201.4 190 60.5
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 3.9e-49 198.7 201 59.2
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 3.9e-49 198.7 201 59.2
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 1.1e-48 197.2 149 69.8
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 2.0e-48 196.4 191 59.7
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 2.8e-47 192.6 173 59.0
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 4.8e-47 191.8 192 57.8
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 8.2e-47 191.0 192 56.2
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 1.3e-44 183.7 191 55.0
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 1.3e-44 183.7 214 52.3
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 1.7e-44 183.3 190 53.2
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 4.2e-43 178.7 191 53.9
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 1.2e-42 177.2 192 53.1
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 6.1e-42 174.9 190 52.1
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 6.1e-42 174.9 190 52.1
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.4e-41 173.7 146 65.1
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 3.0e-41 172.6 195 53.3
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 2.6e-40 169.5 209 47.8
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 4.4e-40 168.7 219 47.9
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 4.8e-39 165.2 190 51.1
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 7.0e-38 161.4 149 65.1
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 2.0e-37 159.8 190 49.5
Cfa020788 Carpinus fangiana HOM05D005762 ORTHO05D006823 1.0e-36 157.5 110 75.5
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 1.7e-36 156.8 187 47.1
THA.LOC104804493 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 1.9e-35 153.3 138 60.1
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 2.1e-34 149.8 192 46.9
Thhalv10026542m.g Eutrema salsugineum HOM05D005762 ORTHO05D006823 1.2e-32 144.1 146 56.2
AL7G21310 Arabidopsis lyrata HOM05D005762 ORTHO05D006823 2.0e-32 143.3 147 56.5
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 4.8e-31 138.7 168 48.8
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 1.4e-30 137.1 207 46.4
Dinv09756 Davidia involucrata HOM05D000667 ORTHO05D002614 1.0e-28 131.0 87 70.1
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 8.5e-28 127.9 81 84.0
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 2.5e-27 126.3 122 61.5
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 2.1e-26 123.2 82 76.8
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 8.0e-26 121.3 82 75.6
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 1.8e-25 120.2 82 74.4
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 6.8e-25 118.2 157 47.8
vmacro13054 Vaccinium macrocarpon HOM05D006258 ORTHO05D007961 6.8e-25 118.2 85 68.2
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 5.4e-22 108.6 77 74.0
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 1.6e-21 107.1 89 60.7
Nitab4.5_0008759g0010 Nicotiana tabacum HOM05D005762 ORTHO05D006823 1.2e-18 97.4 90 61.1
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 1.6e-18 97.1 78 67.9
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 2.1e-18 96.7 115 53.9
Aa31LG2G19570 Aethionema arabicum HOM05D005762 ORTHO05D006823 3.6e-18 95.9 86 57.0
PSO357G0231 Papaver somniferum HOM05D005762 ORTHO05D006823 1.0e-17 94.4 133 45.1
SMO004G0001 Selaginella moellendorffii HOM05D028982 ORTHO05D006823 1.4e-17 94.0 155 41.9
Oeu064081.1 Olea europaea HOM05D005762 ORTHO05D006823 2.4e-14 83.2 66 72.7
MD02G1004700 Malus domestica HOM05D005762 ORTHO05D006823 4.1e-14 82.4 49 79.6
MCO02G015 Micromonas commoda HOM05D005762 ORTHO05D006823 5.9e-13 78.6 202 35.1
Cre16.g672753 Chlamydomonas reinhardtii HOM05D005762 ORTHO05D006823 1.9e-11 73.6 187 32.1
CiPaw.15G164900 Carya illinoinensis HOM05D005762 ORTHO05D006823 9.5e-11 71.2 87 47.1
Actinidia26604 Actinidia chinensis HOM05D005762 ORTHO05D006823 1.9e-06 57.0 76 47.4


User provided reference genes

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