Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G113600 Prunus persica HOM05D002498 ORTHO05D002553 2.2e-141 506.5 383 100.0
MD14G1020000 Malus domestica HOM05D002498 ORTHO05D002553 2.1e-72 277.3 205 81.5
MD12G1023000 Malus domestica HOM05D002498 ORTHO05D002553 2.6e-70 270.4 206 82.0
CANSAT80G2428 Cannabis sativa HOM05D002498 ORTHO05D002553 2.1e-56 224.2 216 59.7
CANSAT80G2666 Cannabis sativa HOM05D002498 ORTHO05D002553 3.6e-56 223.4 216 59.3
Haze_19584 Corylus avellana HOM05D002498 ORTHO05D002553 8.4e-53 212.2 225 57.8
QL07p039457 Quercus lobata HOM05D002498 ORTHO05D002553 2.4e-52 210.7 212 57.5
Cfa016584 Carpinus fangiana HOM05D002498 ORTHO05D002553 4.2e-52 209.9 207 58.5
Cpa.g.sc5.43 Carica papaya HOM05D002333 ORTHO05D002485 2.7e-51 207.2 213 63.8
THA.LOC104816386 Tarenaya hassleriana HOM05D002498 ORTHO05D002553 1.1e-44 185.3 221 56.1
CsaV3_6G040610 Cucumis sativus L. HOM05D002498 ORTHO05D002553 4.2e-44 183.3 212 59.9
Eucgr.K02056 Eucalyptus grandis HOM05D002498 ORTHO05D002553 5.5e-44 183.0 210 61.0
arahy.Tifrunner.gnm1.ann1.FR3P05 Arachis hypogaea HOM05D002498 ORTHO05D002553 2.1e-43 181.0 161 65.8
Ciclev10011440m.g Citrus clementina HOM05D002498 ORTHO05D002553 2.7e-43 180.6 212 57.1
Atru.chr8.1574 Acer truncatum HOM05D002498 ORTHO05D002553 3.9e-42 176.8 195 60.0
VMungo0720G1109 Vigna mungo HOM05D002498 ORTHO05D002553 5.1e-42 176.4 215 54.0
ClCG04G009960 Citrullus lanatus HOM05D002498 ORTHO05D002553 1.1e-41 175.3 207 52.2
AL3G21400 Arabidopsis lyrata HOM05D002498 ORTHO05D002553 7.4e-41 172.6 220 56.8
Phvul.007G228800 Phaseolus vulgaris HOM05D002498 ORTHO05D002553 9.6e-41 172.2 207 55.1
TAR623G1132 Trochodendron aralioides HOM05D002498 ORTHO05D002553 2.1e-40 171.0 221 54.8
Ca_22051_v3 Cicer arietinum L. HOM05D002498 ORTHO05D002553 3.7e-40 170.2 217 55.8
TPR.G35430 Trifolium pratense HOM05D002498 ORTHO05D002553 6.2e-40 169.5 166 60.2
Glyma.10G070700 Glycine max HOM05D002498 ORTHO05D002553 8.1e-40 169.1 211 53.6
Glyma.13G152882 Glycine max HOM05D002498 ORTHO05D002553 8.1e-40 169.1 209 55.0
HanXRQChr13g0401921 Helianthus annuus HOM05D002498 ORTHO05D002553 1.4e-39 168.3 216 49.5
Lalb_Chr08g0237861 Lupinus albus HOM05D002498 ORTHO05D002553 1.8e-39 167.9 171 61.4
Medtr1g060410 Medicago truncatula HOM05D002498 ORTHO05D002553 1.8e-39 167.9 218 50.5
Psat6g081520 Pisum sativum HOM05D002498 ORTHO05D002553 1.8e-39 167.9 207 54.1
CSS0029798 Camellia sinensis var. sinensis HOM05D002498 ORTHO05D002553 4.0e-39 166.8 172 56.4
Carub.0003s0917 Capsella rubella HOM05D002498 ORTHO05D002553 5.3e-39 166.4 222 54.5
Lsat_1_v5_gn_6_24321 Lactuca sativa HOM05D002498 ORTHO05D001826 5.3e-39 166.4 211 50.2
PGR142G0490 Punica granatum HOM05D002498 ORTHO05D002553 9.0e-39 165.6 209 54.1
AT3G10070 Arabidopsis thaliana HOM05D002498 ORTHO05D002553 1.5e-38 164.9 220 54.5
FAN02G2657 Fragaria x ananassa HOM05D002498 ORTHO05D002553 1.7e-37 161.4 168 59.5
Rhsim03G0077100 Rhododendron simsii HOM05D002498 ORTHO05D002553 1.7e-37 161.4 169 58.6
Gorai.002G158700 Gossypium raimondii HOM05D002498 ORTHO05D002553 8.4e-37 159.1 215 52.6
GSVIVG01033805001 Vitis vinifera HOM05D002498 ORTHO05D002553 1.9e-36 157.9 115 70.4
Thecc.05G086100 Theobroma cacao HOM05D002498 ORTHO05D002553 3.2e-36 157.1 214 53.3
Sp3g08380 Schrenkiella parvula HOM05D002498 ORTHO05D002553 5.5e-36 156.4 221 52.5
Aa31LG3G2610 Aethionema arabicum HOM05D002498 ORTHO05D002553 7.1e-36 156.0 223 51.6
FAN09G2440 Fragaria x ananassa HOM05D002498 ORTHO05D002553 7.1e-36 156.0 227 52.9
BraA05t22689Z Brassica rapa HOM05D002498 ORTHO05D002553 1.2e-35 155.2 221 51.6
Gohir.A01G138400 Gossypium hirsutum HOM05D002498 ORTHO05D002553 2.1e-35 154.5 214 46.3
A05p38980 Brassica napus HOM05D002498 ORTHO05D002553 3.5e-35 153.7 221 51.1
FAN05G0009 Fragaria x ananassa HOM05D002498 ORTHO05D002553 3.5e-35 153.7 208 59.1
C05p58010 Brassica napus HOM05D002498 ORTHO05D002553 4.6e-35 153.3 217 52.1
Nn2g14104 Nelumbo nucifera HOM05D002498 ORTHO05D002553 2.3e-34 151.0 217 54.4
Lj5g0026257 Lotus japonicus HOM05D002498 ORTHO05D002553 3.0e-34 150.6 147 62.6
Thhalv10020482m.g Eutrema salsugineum HOM05D002498 ORTHO05D002553 8.7e-34 149.1 222 51.8
MELO3C024537.2 Cucumis melo HOM05D002498 ORTHO05D002553 1.5e-33 148.3 183 52.5
Gohir.D01G128066 Gossypium hirsutum HOM05D002498 ORTHO05D002553 2.5e-33 147.5 234 46.6
Actinidia05442 Actinidia chinensis HOM05D002498 ORTHO05D002553 3.3e-33 147.1 220 55.5
Sed0015742 Sechium edule HOM05D002498 ORTHO05D002553 4.3e-33 146.7 205 47.3
Duzib093G0103 Durio zibethinus HOM05D002498 ORTHO05D002553 1.3e-32 145.2 213 49.8
Cc06_g05580 Coffea canephora HOM05D002498 ORTHO05D002553 4.8e-32 143.3 168 58.9
Potri.006G083500 Populus trichocarpa HOM05D002498 ORTHO05D002553 4.8e-32 143.3 211 50.7
DCAR_009154 Daucus carota HOM05D002333 ORTHO05D002485 6.3e-32 142.9 161 54.0
TWI53G1940 Tripterygium wilfordii HOM05D002498 ORTHO05D002553 1.8e-31 141.4 213 47.4
Lj2A134T56 Lonicera japonica HOM05D002498 ORTHO05D002553 1.2e-30 138.7 168 54.8
MSTRG.5828 Avicennia marina HOM05D002498 ORTHO05D002553 1.5e-30 138.3 208 45.2
Dinv31667 Davidia involucrata HOM05D002498 ORTHO05D002553 2.0e-30 137.9 232 49.6
Sabra06G0063100 Salix brachista HOM05D002498 ORTHO05D002553 4.5e-30 136.7 215 47.9
Oeu014905.2 Olea europaea HOM05D002498 ORTHO05D002553 3.8e-29 133.7 233 41.2
BolC5t34457H Brassica oleracea HOM05D002498 ORTHO05D002553 6.5e-29 132.9 225 47.6
RcHm_v2.0_Chr3g0472861 Rosa chinensis HOM05D002498 ORTHO05D002553 8.4e-29 132.5 118 66.1
Aqoxy2G01262 Aquilegia oxysepala HOM05D002498 ORTHO05D002553 1.1e-28 132.1 176 49.4
Sed0013523 Sechium edule HOM05D002498 ORTHO05D002553 1.4e-28 131.7 194 52.1
arahy.Tifrunner.gnm1.ann1.X6IDHH Arachis hypogaea HOM05D002498 ORTHO05D002553 4.2e-28 130.2 161 53.4
SalBow3G2137 Salvia bowleyana HOM05D002498 ORTHO05D002553 1.5e-25 121.7 209 48.3
Gohir.D01G128132 Gossypium hirsutum HOM05D002498 ORTHO05D002553 3.3e-25 120.6 212 46.2
PGSC0003DMG400008963 Solanum tuberosum HOM05D002498 ORTHO05D002553 5.7e-25 119.8 172 49.4
CiPaw.10G008100 Carya illinoinensis HOM05D002498 ORTHO05D002553 1.6e-24 118.2 107 63.6
Sc20g0006210 Simmondsia chinensis HOM05D002498 ORTHO05D002553 2.2e-24 117.9 210 41.9
Nitab4.5_0002400g0020 Nicotiana tabacum HOM05D002498 ORTHO05D002553 4.1e-23 113.6 112 59.8
AUR62033516 Chenopodium quinoa HOM05D002498 ORTHO05D002553 5.3e-23 113.2 176 48.9
EL10Ac5g11677 Beta vulgaris HOM05D002498 ORTHO05D002553 9.0e-23 112.5 217 48.8
FvH4_6g18380 Fragaria vesca HOM05D002498 ORTHO05D002553 1.5e-22 111.7 168 47.0
Solyc09g009680.2 Solanum lycopersicum HOM05D002498 ORTHO05D002553 1.5e-22 111.7 173 45.7
Sopen09g004440 Solanum pennellii HOM05D002498 ORTHO05D002553 1.5e-22 111.7 173 45.7
FAN14G2103 Fragaria x ananassa HOM05D002498 ORTHO05D002553 4.5e-22 110.2 168 46.4
Peaxi162Scf01015g00113 Petunia axillaris HOM05D002498 ORTHO05D002553 5.9e-22 109.8 120 55.8
CAN.G397.34 Capsicum annuum HOM05D002498 ORTHO05D002553 7.7e-22 109.4 167 45.5
Duzib128G0693 Durio zibethinus HOM05D002498 ORTHO05D002553 1.7e-21 108.2 217 39.6
arahy.Tifrunner.gnm1.ann1.PV9J4A Arachis hypogaea HOM05D002498 ORTHO05D002553 8.5e-21 105.9 101 62.4
arahy.Tifrunner.gnm1.ann1.UN6F3P Arachis hypogaea HOM05D002498 ORTHO05D002553 8.5e-21 105.9 101 62.4
ECA233G3368 Erigeron canadensis HOM05D002498 ORTHO05D002553 2.5e-20 104.4 196 43.9
Manes.09G056700 Manihot esculenta HOM05D002498 ORTHO05D002553 1.2e-19 102.1 219 40.6
Ah.08g210740 Amaranthus hybridus HOM05D002498 ORTHO05D002553 4.6e-19 100.1 219 46.1
Migut.J01057 Erythranthe guttata HOM05D002498 ORTHO05D002553 6.7e-18 96.3 120 52.5
Aa31LG7G13880 Aethionema arabicum HOM05D002498 ORTHO05D002553 1.5e-17 95.1 95 55.8
FAN05G3504 Fragaria x ananassa HOM05D002498 ORTHO05D002553 2.5e-17 94.4 168 44.0
Nitab4.5_0000794g0020 Nicotiana tabacum HOM05D002498 ORTHO05D002553 2.8e-16 90.9 119 50.4
PSO384G1407 Papaver somniferum HOM05D002498 ORTHO05D002553 4.5e-14 83.6 215 37.2
MELO3C000238.2 Cucumis melo HOM05D002498 ORTHO05D002553 7.7e-14 82.8 74 62.2
PSO339G1275 Papaver somniferum HOM05D002498 ORTHO05D002553 1.4e-12 78.6 184 38.0
CDE04G3259 Ceratophyllum demersum HOM05D002498 ORTHO05D002553 2.5e-12 77.8 149 40.9
Lsat_1_v5_gn_2_105561 Lactuca sativa HOM05D002498 ORTHO05D002553 8.8e-10 69.3 95 48.4
SGA_v2.0_scaffold13G06755 Striga asiatica HOM05D002498 ORTHO05D002553 9.7e-09 65.9 207 32.9
ATR0820G218 Amborella trichopoda HOM05D002498 ORTHO05D002553 3.7e-08 63.9 184 37.0
Hund19953 Selenicereus undatus HOM05D002498 ORTHO05D002553 8.2e-08 62.8 205 31.7
AUR62028563 Chenopodium quinoa HOM05D002498 ORTHO05D002553 1.1e-07 62.4 112 48.2
vmacro07396 Vaccinium macrocarpon HOM05D002498 ORTHO05D002553 1.2e-06 58.9 59 54.2


User provided reference genes

Program Settings