Gene: AT3G10070

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G10070
  • Transcript Identifier AT3G10070.1
  • Gene Type Coding gene
  • Location Chr3 : 3104195-3106798 : negative

Gene Family Information

  • ID HOM05D002498
  • #Genes/#Species 273/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G10070.1
  • symbol TAF12
  • Alias TAFII58,TATA-ASSOCIATED FACTOR II 58
  • uniprot Q9SR71

Descriptions

  • Description TBP-associated factor 12
  • Computational description TBP-associated factor 12 (TAF12); FUNCTIONS IN: DNA binding, transcription initiation factor activity; INVOLVED IN: transcription initiation; LOCATED IN: chloroplast, transcription factor TFIID complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID (InterPro:IPR003228), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: Transcription initiation factor TFIID subunit A (TAIR:AT1G17440.2); Has 50598 Blast hits to 32470 proteins in 1374 species: Archae - 31; Bacteria - 3770; Metazoa - 21452; Fungi - 11498; Plants - 4385; Viruses - 864; Other Eukaryotes - 8598 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006352
IEA
GOA DatabaseDNA-templated transcription, initiation
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0051123
IBA
Gene OntologyRNA polymerase II preinitiation complex assembly1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0017025
IBA
Gene OntologyTBP-class protein binding1
GO:0046982
IEA
Gene Ontologyprotein heterodimerization activity
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0003677
IBA
Gene OntologyDNA binding1
GO:0005515
IPI
Gene Ontologyprotein binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046695
IEA
Gene OntologySLIK (SAGA-like) complex
GO:0046695
IEA
InterProSLIK (SAGA-like) complex
GO:0000124
IEA
Gene OntologySAGA complex
GO:0000124
IEA
InterProSAGA complex
GO:0005669
IEA
GOA Databasetranscription factor TFIID complex
GO:0005669
IBA
Gene Ontologytranscription factor TFIID complex1
GO:0005669
IEA
InterProtranscription factor TFIID complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009072 Histone-fold
IPR003228 Transcription initiation factor TFIID subunit 12 domain
IPR037794 Transcription initiation factor TFIID subunit 12
Mapman id Description
15.3.4.1.5 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TAF module shared with SAGA/TFIId complexes.component TAF12