Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G069600 Prunus persica HOM05D007699 ORTHO05D009796 1.3e-41 172.6 82 100.0
FAN08G2016 Fragaria x ananassa HOM05D007699 ORTHO05D009796 1.3e-17 92.8 68 69.1
Potri.011G103401 Populus trichocarpa HOM05D007699 ORTHO05D009796 2.5e-16 88.6 81 60.5
CARHR088640 Cardamine hirsuta HOM05D007699 ORTHO05D009796 3.2e-16 88.2 56 76.8
Prupe.7G080000 Prunus persica HOM05D007699 ORTHO05D009796 4.2e-16 87.8 44 88.6
Potri.011G103301 Populus trichocarpa HOM05D007699 ORTHO05D009796 9.3e-16 86.7 54 75.9
Medtr3g084270 Medicago truncatula HOM05D007699 ORTHO05D009796 1.2e-15 86.3 46 87.0
Nitab4.5_0005352g0040 Nicotiana tabacum HOM05D007699 ORTHO05D009796 1.2e-15 86.3 44 86.4
C03p91420 Brassica napus HOM05D007699 ORTHO05D009796 2.1e-15 85.5 51 78.4
FAN13G3199 Fragaria x ananassa HOM05D007699 ORTHO05D009796 3.5e-15 84.7 46 87.0
Medtr3g105890 Medicago truncatula HOM05D007699 ORTHO05D009796 3.5e-15 84.7 39 94.9
TPR.G12299 Trifolium pratense HOM05D007699 ORTHO05D009796 3.5e-15 84.7 38 97.4
TPR.G38695 Trifolium pratense HOM05D000020 ORTHO05D000543 3.5e-15 84.7 38 97.4
Hma1.2p1_0886F.1_g232660 Hydrangea macrophylla HOM05D007699 ORTHO05D009796 4.6e-15 84.3 39 92.3
Hma1.2p1_0886F.1_g232685 Hydrangea macrophylla HOM05D007699 ORTHO05D009796 4.6e-15 84.3 39 92.3
Sopen12g028800 Solanum pennellii HOM05D007699 ORTHO05D009796 6.0e-15 84.0 37 100.0
Phvul.001G066700 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 1.0e-14 83.2 49 77.6
Phvul.001G084100 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 1.0e-14 83.2 40 92.5
TPR.G32688 Trifolium pratense HOM05D007699 ORTHO05D009796 1.0e-14 83.2 49 77.6
A05p18230 Brassica napus HOM05D007699 ORTHO05D009796 1.3e-14 82.8 46 80.4
Gohir.D06G068332 Gossypium hirsutum HOM05D007699 ORTHO05D009796 1.3e-14 82.8 45 84.4
Manes.11G145650 Manihot esculenta HOM05D007699 ORTHO05D009796 1.3e-14 82.8 39 94.9
Phvul.001G066900 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 1.3e-14 82.8 37 97.3
FvH4_3g13700 Fragaria vesca HOM05D007699 ORTHO05D009796 1.8e-14 82.4 39 94.9
Phvul.008G062500 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 1.8e-14 82.4 42 88.1
arahy.Tifrunner.gnm1.ann1.3J1SD9 Arachis hypogaea HOM05D007699 ORTHO05D009796 2.3e-14 82.0 43 86.0
EL10Ac6g13624 Beta vulgaris HOM05D007699 ORTHO05D009796 2.3e-14 82.0 52 75.0
Carub.0003s1340 Capsella rubella HOM05D007699 ORTHO05D009796 2.3e-14 82.0 42 85.7
FAN11G1327 Fragaria x ananassa HOM05D007699 ORTHO05D009796 2.3e-14 82.0 39 94.9
FAN11G3494 Fragaria x ananassa HOM05D007699 ORTHO05D009796 2.3e-14 82.0 39 94.9
FAN18G1300 Fragaria x ananassa HOM05D005738 ORTHO05D007135 3.0e-14 81.6 36 100.0
FAN18G3749 Fragaria x ananassa HOM05D005738 ORTHO05D007135 3.0e-14 81.6 36 100.0
Mapoly0020s0143 Marchantia polymorpha HOM05D007699 ORTHO05D009796 3.0e-14 81.6 53 71.7
EL10Ac6g13349 Beta vulgaris HOM05D007699 ORTHO05D009796 3.9e-14 81.3 45 84.4
Migut.J00839 Erythranthe guttata HOM05D007699 ORTHO05D009796 3.9e-14 81.3 45 82.2
Solyc12g056290.2 Solanum lycopersicum HOM05D007699 ORTHO05D009796 5.1e-14 80.9 37 97.3
CARHR185520 Cardamine hirsuta HOM05D007699 ORTHO05D009796 6.7e-14 80.5 37 94.6
arahy.Tifrunner.gnm1.ann1.3C01L3 Arachis hypogaea HOM05D007699 ORTHO05D009796 8.7e-14 80.1 35 100.0
Mapoly0086s0020 Marchantia polymorpha HOM05D007699 ORTHO05D009796 8.7e-14 80.1 35 100.0
QL03p053410 Quercus lobata HOM05D007699 ORTHO05D009796 8.7e-14 80.1 45 82.2
EL10Ac6g13685 Beta vulgaris HOM05D007699 ORTHO05D009796 2.5e-13 78.6 46 78.3
FAN08G0324 Fragaria x ananassa HOM05D007699 ORTHO05D009796 4.3e-13 77.8 34 100.0
Pp3c1_6540 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.7e-13 77.4 44 81.8
Gorai.010G079800 Gossypium raimondii HOM05D007699 ORTHO05D009796 7.4e-13 77.0 45 80.0
Pp3c21_2000 Physcomitrium patens HOM05D007699 ORTHO05D009796 7.4e-13 77.0 50 72.0
Pp3c21_2022 Physcomitrium patens HOM05D007699 ORTHO05D009796 7.4e-13 77.0 50 72.0
EL10Ac6g13683 Beta vulgaris HOM05D007699 ORTHO05D009796 9.6e-13 76.6 44 81.8
EL10Ac6g13684 Beta vulgaris HOM05D007699 ORTHO05D009796 9.6e-13 76.6 46 73.9
Ciclev10018283m.g Citrus clementina HOM05D007699 ORTHO05D009796 1.3e-12 76.3 40 87.5
Pp3c10_15080 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.3e-12 76.3 46 76.1
Pp3c10_15084 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.3e-12 76.3 46 76.1
Pp3s1006_30 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.3e-12 76.3 46 76.1
Pp3s638_22 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.3e-12 76.3 46 76.1
Pp3s677_10 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.3e-12 76.3 46 76.1
Pp3s677_11 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.3e-12 76.3 46 76.1
Thecc.10G037500 Theobroma cacao HOM05D007699 ORTHO05D009796 1.3e-12 76.3 41 85.4
Pp3c15_10810 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.8e-12 75.1 38 89.5
Pp3c15_10813 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.8e-12 75.1 38 89.5
Pp3c15_10820 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.8e-12 75.1 38 89.5
GSVIVG01037330001 Vitis vinifera HOM05D007699 ORTHO05D009796 4.8e-12 74.3 36 91.7
Ah.10g036850 Amaranthus hybridus HOM05D007699 ORTHO05D009796 6.2e-12 73.9 35 94.3
Medtr3g108610 Medicago truncatula HOM05D007699 ORTHO05D009796 8.2e-12 73.6 52 69.2
CSS0021910 Camellia sinensis var. sinensis HOM05D007699 ORTHO05D009796 1.1e-11 73.2 43 79.1
EL10Ac6g13623 Beta vulgaris HOM05D007699 ORTHO05D009796 1.4e-11 72.8 34 94.1
EL10Ac6g13625 Beta vulgaris HOM05D007699 ORTHO05D009796 1.4e-11 72.8 73 56.2
Pp3s677_20 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.4e-11 72.8 49 73.5
Nn7g36904 Nelumbo nucifera HOM05D007699 ORTHO05D009796 1.8e-11 72.4 34 94.1
Carub.0006s3371 Capsella rubella HOM05D007699 ORTHO05D009796 2.4e-11 72.0 38 84.2
Phvul.001G090500 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 3.1e-11 71.6 44 75.0
Potri.005G055667 Populus trichocarpa HOM05D007699 ORTHO05D009796 3.1e-11 71.6 42 83.3
Pp3c24_6960 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.3e-11 70.9 38 84.2
Pp3c24_6961 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.3e-11 70.9 38 84.2
Gorai.011G262200 Gossypium raimondii HOM05D007699 ORTHO05D009796 6.9e-11 70.5 45 75.6
Medtr8g461450 Medicago truncatula HOM05D007699 ORTHO05D009796 6.9e-11 70.5 31 100.0
Potri.005G055534 Populus trichocarpa HOM05D007699 ORTHO05D009796 6.9e-11 70.5 31 100.0
FAN18G1871 Fragaria x ananassa HOM05D007699 ORTHO05D009796 9.0e-11 70.1 31 100.0
SHI29091 Sapria himalayana HOM05D007699 ORTHO05D009796 1.5e-10 69.3 33 93.9
Gorai.011G262800 Gossypium raimondii HOM05D007699 ORTHO05D009796 2.6e-10 68.6 32 96.9
CSS0023756 Camellia sinensis var. sinensis HOM05D007699 ORTHO05D009796 4.5e-10 67.8 30 100.0
FAN11G3758 Fragaria x ananassa HOM05D007699 ORTHO05D009796 4.5e-10 67.8 30 100.0
Glyma.19G099100 Glycine max HOM05D007699 ORTHO05D009796 4.5e-10 67.8 30 100.0
Gohir.A11G277350 Gossypium hirsutum HOM05D007699 ORTHO05D009796 4.5e-10 67.8 30 100.0
Phvul.009G076400 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 4.5e-10 67.8 54 63.0
PGSC0003DMG400029597 Solanum tuberosum HOM05D000312 ORTHO05D000221 4.5e-10 67.8 30 100.0
Pp3c1_26810 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.8e-10 67.4 31 96.8
Pp3c1_26830 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.8e-10 67.4 31 96.8
arahy.Tifrunner.gnm1.ann1.C3EWW9 Arachis hypogaea HOM05D007699 ORTHO05D009796 2.2e-09 65.5 30 96.7
Medtr2g101670 Medicago truncatula HOM05D007699 ORTHO05D009796 8.4e-09 63.5 35 77.1
EL10Ac6g13621 Beta vulgaris HOM05D007699 ORTHO05D009796 2.5e-08 62.0 34 82.4
Pp3c24_16090 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.5e-08 60.8 42 64.3
Pp3c24_16091 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.5e-08 60.8 42 64.3
Medtr6g070990 Medicago truncatula HOM05D007699 ORTHO05D009796 3.5e-07 58.2 27 96.3
SHI28974 Sapria himalayana HOM05D007699 ORTHO05D009796 4.6e-07 57.8 57 49.1
Pp3c27_1930 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.8e-06 55.8 35 71.4
AT2G15530 Arabidopsis thaliana HOM05D000187 ORTHO05D000230 8.7e-06 53.5 46 63.0


User provided reference genes

Program Settings