Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G055000 Prunus persica HOM05D003612 ORTHO05D004323 1.5e-152 542.7 265 100.0
MD12G1080400 Malus domestica HOM05D003612 ORTHO05D004323 2.0e-99 366.3 266 70.7
RcHm_v2.0_Chr3g0483371 Rosa chinensis HOM05D003612 ORTHO05D004323 5.9e-96 354.8 285 65.3
FAN02G1760 Fragaria x ananassa HOM05D003612 ORTHO05D004323 6.1e-93 344.7 239 71.1
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 6.1e-93 344.7 239 71.1
FvH4_6g24380 Fragaria vesca HOM05D003612 ORTHO05D004323 4.3e-86 322.0 224 69.6
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.5e-83 313.5 216 70.4
QL07p002913 Quercus lobata HOM05D003612 ORTHO05D004323 9.8e-83 310.8 267 61.8
QL11p026785 Quercus lobata HOM05D003612 ORTHO05D004323 9.8e-83 310.8 269 61.3
Dinv02797 Davidia involucrata HOM05D003612 ORTHO05D004323 7.8e-80 301.2 266 58.3
CANSAT80G2682 Cannabis sativa HOM05D003612 ORTHO05D004323 5.0e-79 298.5 240 61.2
Cfa016791 Carpinus fangiana HOM05D003612 ORTHO05D004323 4.3e-78 295.4 268 61.2
CSS0036075 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 1.6e-77 293.5 266 55.6
Dinv39651 Davidia involucrata HOM05D003612 ORTHO05D004323 2.1e-77 293.1 268 59.0
CiPaw.09G039700 Carya illinoinensis HOM05D003612 ORTHO05D004323 8.0e-77 291.2 268 57.8
Manes.04G104200 Manihot esculenta HOM05D003612 ORTHO05D004323 5.2e-76 288.5 267 54.3
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 6.8e-76 288.1 241 64.3
GSVIVG01033242001 Vitis vinifera HOM05D003612 ORTHO05D004323 8.9e-76 287.7 256 59.8
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 1.5e-75 287.0 241 64.3
MBI16_g21161_MAGBIO Magnolia biondii HOM05D003612 ORTHO05D004323 2.0e-75 286.6 266 54.5
Lj2A386T88 Lonicera japonica HOM05D003612 ORTHO05D004323 9.8e-75 284.3 266 54.1
Eucgr.B02734 Eucalyptus grandis HOM05D003612 ORTHO05D004323 2.9e-74 282.7 266 56.4
Eucgr.A02322 Eucalyptus grandis HOM05D003612 ORTHO05D004323 4.9e-74 282.0 266 56.4
Prupe.5G048800 Prunus persica HOM05D003612 ORTHO05D004323 5.4e-73 278.5 214 66.8
Ciclev10005938m.g Citrus clementina HOM05D003612 ORTHO05D004323 1.2e-72 277.3 261 54.8
Sabra17G0119100 Salix brachista HOM05D003612 ORTHO05D004323 1.2e-72 277.3 262 53.8
ClCG04G006280 Citrullus lanatus HOM05D003612 ORTHO05D004323 1.6e-72 276.9 267 52.8
Medtr8g090105 Medicago truncatula HOM05D003612 ORTHO05D004323 2.7e-72 276.2 270 50.0
Potri.017G142200 Populus trichocarpa HOM05D003612 ORTHO05D004323 1.0e-71 274.2 262 51.9
Rhsim04G0105800 Rhododendron simsii HOM05D003612 ORTHO05D004323 1.0e-71 274.2 266 53.4
TPR.G6202 Trifolium pratense HOM05D003612 ORTHO05D004323 1.3e-71 273.9 269 50.6
Hund23474 Selenicereus undatus HOM05D003612 ORTHO05D004323 5.1e-71 271.9 265 52.8
MELO3C025231.2 Cucumis melo HOM05D003612 ORTHO05D004323 6.6e-71 271.6 269 51.3
DCAR_030722 Daucus carota HOM05D003612 ORTHO05D004323 8.6e-71 271.2 265 52.8
arahy.Tifrunner.gnm1.ann1.GM1CB9 Arachis hypogaea HOM05D003612 ORTHO05D004323 2.5e-70 269.6 246 56.5
CsaV3_4G027280 Cucumis sativus L. HOM05D003612 ORTHO05D004323 2.5e-70 269.6 269 50.9
VMungo1309G0648 Vigna mungo HOM05D003612 ORTHO05D004323 3.3e-70 269.2 266 50.4
Sed0024079 Sechium edule HOM05D003612 ORTHO05D004323 2.8e-69 266.2 266 51.5
arahy.Tifrunner.gnm1.ann1.65NHSX Arachis hypogaea HOM05D003612 ORTHO05D004323 6.2e-69 265.0 246 55.7
Gorai.002G227800 Gossypium raimondii HOM05D003612 ORTHO05D004323 2.3e-68 263.1 263 53.2
TAR369G0285 Trochodendron aralioides HOM05D003612 ORTHO05D004323 4.0e-68 262.3 253 54.5
PGR004G2683 Punica granatum HOM05D003612 ORTHO05D004323 2.0e-67 260.0 266 50.8
TWI53G1732 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 2.6e-67 259.6 267 53.2
Gohir.A01G194000 Gossypium hirsutum HOM05D003612 ORTHO05D004323 7.5e-67 258.1 263 52.9
Lj1g0003709 Lotus japonicus HOM05D003612 ORTHO05D004323 7.5e-67 258.1 243 50.2
Lalb_Chr20g0110641 Lupinus albus HOM05D003612 ORTHO05D004323 1.3e-66 257.3 274 48.2
Cc06_g17860 Coffea canephora HOM05D003612 ORTHO05D004323 4.9e-66 255.4 266 51.9
TWI74G0690 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 4.9e-66 255.4 274 50.4
Actinidia22794 Actinidia chinensis HOM05D003612 ORTHO05D004323 1.1e-65 254.2 264 49.6
Cc04_g15140 Coffea canephora HOM05D003612 ORTHO05D004323 1.1e-65 254.2 266 50.4
vmacro09060 Vaccinium macrocarpon HOM05D003612 ORTHO05D004323 1.9e-65 253.4 266 51.1
TPR.G18234 Trifolium pratense HOM05D003612 ORTHO05D004323 2.4e-65 253.1 243 50.6
COL.COLO4_22302 Corchorus olitorius HOM05D003612 ORTHO05D004323 7.1e-65 251.5 267 52.1
COL.COLO4_19254 Corchorus olitorius HOM05D003612 ORTHO05D004323 9.2e-65 251.1 267 51.3
Psat3g074360 Pisum sativum HOM05D003612 ORTHO05D004323 9.2e-65 251.1 267 47.9
Haze_19817 Corylus avellana HOM05D003612 ORTHO05D004323 2.7e-64 249.6 272 54.8
Hund15698 Selenicereus undatus HOM05D003612 ORTHO05D004323 4.6e-64 248.8 266 50.4
Thecc.05G151100 Theobroma cacao HOM05D003612 ORTHO05D004323 6.0e-64 248.4 211 59.7
Haze_19820 Corylus avellana HOM05D003612 ORTHO05D004323 1.3e-63 247.3 272 54.4
Psat7g055720 Pisum sativum HOM05D003612 ORTHO05D004323 3.9e-63 245.7 253 48.6
Cpa.g.sc182.7 Carica papaya HOM05D003612 ORTHO05D004323 1.9e-62 243.4 239 54.4
Ca_08432_v3 Cicer arietinum L. HOM05D003612 ORTHO05D004323 2.1e-61 240.0 252 48.0
PGSC0003DMG400008168 Solanum tuberosum HOM05D003612 ORTHO05D004323 3.6e-61 239.2 267 49.8
Lj6g0010730 Lotus japonicus HOM05D003612 ORTHO05D004323 6.2e-61 238.4 229 50.7
Phvul.007G088100 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 6.2e-61 238.4 213 54.9
Nitab4.5_0010316g0020 Nicotiana tabacum HOM05D003612 ORTHO05D004323 8.1e-61 238.0 267 48.7
Nitab4.5_0000082g0220 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.4e-60 237.3 268 50.4
Sopen10g029960 Solanum pennellii HOM05D003612 ORTHO05D004323 2.4e-60 236.5 269 48.7
Solyc10g079310.2 Solanum lycopersicum HOM05D003612 ORTHO05D004323 6.8e-60 235.0 269 48.7
Dinv02795 Davidia involucrata HOM05D003612 ORTHO05D004323 8.9e-60 234.6 190 60.5
Peaxi162Scf00059g01812 Petunia axillaris HOM05D003612 ORTHO05D004323 1.2e-59 234.2 269 48.7
VMungo1383G3573 Vigna mungo HOM05D003612 ORTHO05D004323 1.2e-59 234.2 249 47.4
CAN.G641.26 Capsicum annuum HOM05D003612 ORTHO05D004323 1.5e-59 233.8 267 48.3
Nitab4.5_0000082g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 2.0e-59 233.4 267 47.9
HanXRQChr04g0113101 Helianthus annuus HOM05D003612 ORTHO05D004323 3.4e-59 232.6 224 52.7
Oeu008170.1 Olea europaea HOM05D003612 ORTHO05D004323 4.4e-59 232.3 243 51.4
CSS0050265 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 5.8e-59 231.9 196 58.2
Nitab4.5_0000912g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 2.2e-58 229.9 268 49.3
CARHR167560 Cardamine hirsuta HOM05D003612 ORTHO05D004323 2.9e-58 229.6 268 46.3
Nn1g01643 Nelumbo nucifera HOM05D003612 ORTHO05D004323 2.9e-58 229.6 266 47.7
Carub.0005s2421 Capsella rubella HOM05D003612 ORTHO05D004323 3.8e-58 229.2 272 46.3
Aqoxy7G03372 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 1.1e-57 227.6 267 48.3
Migut.B00971 Erythranthe guttata HOM05D003612 ORTHO05D004323 1.1e-57 227.6 246 48.4
Aqoxy7G03834 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 1.9e-57 226.9 235 51.5
Carub.0001s3481 Capsella rubella HOM05D003612 ORTHO05D004323 4.2e-57 225.7 272 44.5
Migut.K00098 Erythranthe guttata HOM05D003612 ORTHO05D004323 1.2e-56 224.2 246 47.2
Oeu023123.1 Olea europaea HOM05D003612 ORTHO05D004323 1.2e-56 224.2 256 47.7
Sp5g05240 Schrenkiella parvula HOM05D003612 ORTHO05D004323 2.1e-56 223.4 273 45.8
Thhalv10006455m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 3.5e-56 222.6 256 46.9
Os09g0504800 Oryza sativa ssp. japonica HOM05D003612 ORTHO05D004323 3.5e-56 222.6 259 45.6
AL3G11670 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 4.6e-56 222.2 244 46.7
AT3G57360 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 6.0e-56 221.9 268 45.1
Lsat_1_v5_gn_7_11501 Lactuca sativa HOM05D000048 ORTHO05D000436 6.0e-56 221.9 227 51.1
Zm00001eb102310 Zea mays HOM05D003612 ORTHO05D004323 6.0e-56 221.9 260 45.4
Actinidia17229 Actinidia chinensis HOM05D003612 ORTHO05D004323 7.8e-56 221.5 229 50.7
ClCG10G015700 Citrullus lanatus HOM05D003612 ORTHO05D004323 1.0e-55 221.1 243 49.4
A09p50260 Brassica napus HOM05D003612 ORTHO05D004323 1.3e-55 220.7 268 45.9
BraA04t16040Z Brassica rapa HOM05D003612 ORTHO05D004323 1.3e-55 220.7 266 44.4
BraA09t40476Z Brassica rapa HOM05D003612 ORTHO05D004323 1.3e-55 220.7 268 45.9
MD14G1076600 Malus domestica HOM05D003612 ORTHO05D004323 2.3e-55 219.9 255 51.0
SalBow1G2865 Salvia bowleyana HOM05D003612 ORTHO05D004323 2.3e-55 219.9 247 48.6
AL5G38900 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 3.0e-55 219.5 267 44.9
SGA_v2.0_scaffold94G28492 Striga asiatica HOM05D003612 ORTHO05D004323 5.1e-55 218.8 246 47.2
AUR62029731 Chenopodium quinoa HOM05D003612 ORTHO05D004323 1.5e-54 217.2 278 43.2
MSTRG.26129 Avicennia marina HOM05D003612 ORTHO05D004323 4.3e-54 215.7 268 44.0
A04p03190 Brassica napus HOM05D003612 ORTHO05D004323 1.3e-53 214.2 228 46.9
THA.LOC104802043 Tarenaya hassleriana HOM05D003612 ORTHO05D004323 2.8e-53 213.0 271 42.1
C08p32750 Brassica napus HOM05D003612 ORTHO05D004323 3.6e-53 212.6 268 45.5
BolC8t50886H Brassica oleracea HOM05D003612 ORTHO05D004323 3.6e-53 212.6 268 45.5
BcaC02g09930 Brassica carinata HOM05D003612 ORTHO05D004323 1.4e-52 210.7 266 44.0
C04p35070 Brassica napus HOM05D003612 ORTHO05D004323 1.4e-52 210.7 266 44.0
BolC4t25063H Brassica oleracea HOM05D003612 ORTHO05D004323 1.4e-52 210.7 266 44.0
BcaC07g40390 Brassica carinata HOM05D003612 ORTHO05D004323 1.8e-52 210.3 217 50.2
TAR369G0664 Trochodendron aralioides HOM05D003612 ORTHO05D004323 3.1e-52 209.5 172 58.7
Aa31LG10G12210 Aethionema arabicum HOM05D000708 ORTHO05D004323 4.0e-52 209.1 253 43.9
EL10Ac6g13255 Beta vulgaris HOM05D003612 ORTHO05D004323 9.0e-52 208.0 277 43.3
Nn8g39441 Nelumbo nucifera HOM05D003612 ORTHO05D004323 1.2e-51 207.6 241 47.3
SHI13547 Sapria himalayana HOM05D003612 ORTHO05D004323 1.5e-51 207.2 265 43.0
Nitab4.5_0004416g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 2.0e-51 206.8 250 47.2
unitig_52.g17667 Utricularia gibba HOM05D003612 ORTHO05D004323 3.4e-51 206.1 232 47.0
Thhalv10009639m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 5.8e-51 205.3 268 44.8
PSO339G0745 Papaver somniferum HOM05D003612 ORTHO05D004323 9.9e-51 204.5 229 48.5
Duzib128G0868 Durio zibethinus HOM05D003612 ORTHO05D004323 1.3e-50 204.1 192 54.7
Aa31LG1G13790 Aethionema arabicum HOM05D003612 ORTHO05D004323 1.7e-50 203.8 253 44.7
Sc04g0007910 Simmondsia chinensis HOM05D003612 ORTHO05D004323 8.4e-50 201.4 180 55.6
Phvul.008G158112 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 1.1e-49 201.1 217 49.3
Thhalv10008553m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 1.4e-49 200.7 213 48.4
Ah.03g134750 Amaranthus hybridus HOM05D003612 ORTHO05D004323 1.9e-49 200.3 287 40.8
ECA236G0894 Erigeron canadensis HOM05D003612 ORTHO05D004323 1.9e-49 200.3 253 43.5
PSO210G2319 Papaver somniferum HOM05D003612 ORTHO05D004323 2.4e-49 199.9 268 42.5
PSO210G3983 Papaver somniferum HOM05D003612 ORTHO05D004323 4.2e-49 199.1 251 45.8
ATR0829G008 Amborella trichopoda HOM05D003612 ORTHO05D004323 5.4e-49 198.7 313 41.5
Gohir.D01G184300 Gossypium hirsutum HOM05D003612 ORTHO05D004323 2.1e-48 196.8 163 57.1
AT3G02370 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 3.5e-48 196.1 212 47.2
AUR62032829 Chenopodium quinoa HOM05D003612 ORTHO05D004323 3.5e-48 196.1 263 41.4
PSO648G0079 Papaver somniferum HOM05D003612 ORTHO05D004323 3.5e-48 196.1 265 43.4
Sopen03g026320 Solanum pennellii HOM05D003612 ORTHO05D004323 3.5e-48 196.1 206 51.9
Thhalv10009908m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 4.6e-48 195.7 258 43.8
HPP92_020032 Vanilla planifolia HOM05D003612 ORTHO05D004323 5.1e-47 192.2 217 47.0
BcaB02g08320 Brassica carinata HOM05D003612 ORTHO05D004323 1.9e-46 190.3 222 43.7
BolC8t50888H Brassica oleracea HOM05D003612 ORTHO05D004323 4.3e-46 189.1 267 41.2
PGSC0003DMG400011936 Solanum tuberosum HOM05D003612 ORTHO05D004323 4.3e-46 189.1 180 53.9
Peaxi162Scf00244g00019 Petunia axillaris HOM05D003612 ORTHO05D004323 8.1e-45 184.9 180 53.3
Glyma.07G129400 Glycine max HOM05D003612 ORTHO05D004323 2.9e-42 176.4 277 37.9
CDE09G0671 Ceratophyllum demersum HOM05D003612 ORTHO05D004323 1.2e-40 171.0 237 41.8
AUR62005836 Chenopodium quinoa HOM05D000760 ORTHO05D004323 2.1e-40 170.2 253 40.3
Sopen03g026330 Solanum pennellii HOM05D003612 ORTHO05D004323 6.0e-40 168.7 226 44.7
Lj1C1128T4 Lonicera japonica HOM05D003612 ORTHO05D004323 1.5e-38 164.1 160 50.6
PSO339G0740 Papaver somniferum HOM05D003612 ORTHO05D004323 1.9e-38 163.7 177 49.2
BcaNung07094 Brassica carinata HOM05D003612 ORTHO05D004323 3.7e-37 159.5 168 47.0
Eucgr.A02319 Eucalyptus grandis HOM05D003612 ORTHO05D004323 1.5e-35 154.1 266 38.7
RcHm_v2.0_Chr1g0361791 Rosa chinensis HOM05D003612 ORTHO05D004323 6.5e-34 148.7 137 61.3
PSO339G6630 Papaver somniferum HOM05D003612 ORTHO05D004323 2.5e-33 146.7 219 40.6
CSS0020602 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 4.2e-33 146.0 181 47.0
SEGI_02185 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 2.1e-32 143.7 239 37.7
AagrBONN_evm.TU.Sc2ySwM_368.1563 Anthoceros agrestis HOM05D003612 ORTHO05D004323 3.5e-32 142.9 301 31.9
SMO364G0364 Selaginella moellendorffii HOM05D003612 ORTHO05D004323 1.0e-31 141.4 222 35.6
GSVIVG01033245001 Vitis vinifera HOM05D003612 ORTHO05D004323 3.9e-31 139.4 147 55.8
Mapoly0007s0121 Marchantia polymorpha HOM05D003612 ORTHO05D004323 1.1e-30 137.9 314 30.3
Pp3c3_37380 Physcomitrium patens HOM05D003612 ORTHO05D004323 1.1e-30 137.9 234 37.2
SGA_v2.0_scaffold1G00588 Striga asiatica HOM05D003612 ORTHO05D004323 8.2e-29 131.7 196 40.3
Ah.02g117470 Amaranthus hybridus HOM05D003612 ORTHO05D004323 4.5e-27 125.9 227 34.8
QL07p002858 Quercus lobata HOM05D003612 ORTHO05D004323 2.2e-26 123.6 132 53.8
Eucgr.A02317 Eucalyptus grandis HOM05D003612 ORTHO05D004323 6.5e-26 122.1 81 69.1
PSO339G4790 Papaver somniferum HOM05D003612 ORTHO05D004323 3.5e-24 116.3 166 38.6
BcaNung07092 Brassica carinata HOM05D003612 ORTHO05D004323 4.6e-24 115.9 264 33.0
MELO3C030712.2 Cucumis melo HOM05D003612 ORTHO05D004323 1.0e-23 114.8 146 45.9
Solyc03g096220.3 Solanum lycopersicum HOM05D003612 ORTHO05D004323 1.1e-22 111.3 85 60.0
Nn2g10440 Nelumbo nucifera HOM05D003612 ORTHO05D004323 1.3e-21 107.8 117 50.4
C08p32770 Brassica napus HOM05D003612 ORTHO05D004323 6.3e-21 105.5 85 57.6
Glyma.19G136600 Glycine max HOM05D003612 ORTHO05D004323 9.0e-20 101.7 258 31.0
Nitab4.5_0001598g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 2.6e-19 100.1 193 37.3
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 6.5e-18 95.5 113 52.2
Glyma.03G134401 Glycine max HOM05D003612 ORTHO05D004323 3.9e-15 86.3 91 42.9
Peaxi162Scf00002g03215 Petunia axillaris HOM05D003612 ORTHO05D004323 6.3e-13 79.0 144 35.4
CAN.G125.23 Capsicum annuum HOM05D000107 ORTHO05D000062 6.9e-12 75.5 134 36.6
Duzib093G1009 Durio zibethinus HOM05D003612 ORTHO05D004323 9.1e-12 75.1 73 50.7
Lj1A1128T58 Lonicera japonica HOM05D003612 ORTHO05D004323 1.5e-11 74.3 46 67.4
Cfa015703 Carpinus fangiana HOM05D003612 ORTHO05D004323 3.4e-11 73.2 66 56.1
GSVIVG01033244001 Vitis vinifera HOM05D003612 ORTHO05D004323 1.4e-09 67.8 60 55.0
CBR_g2822 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-07 61.2 181 26.5
PGSC0003DMG400013536 Solanum tuberosum HOM05D003612 ORTHO05D004323 8.8e-07 58.5 90 43.3
SEGI_36865 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 7.4e-06 55.5 83 41.0


User provided reference genes

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