Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G053000 Prunus persica HOM05D005650 ORTHO05D007020 7.8e-294 1013.1 517 100.0
MD16G1016000 Malus domestica HOM05D005650 ORTHO05D007020 2.8e-267 924.9 517 91.3
MD13G1018100 Malus domestica HOM05D005650 ORTHO05D007020 1.4e-263 912.5 517 90.9
RcHm_v2.0_Chr4g0442431 Rosa chinensis HOM05D005650 ORTHO05D007020 1.5e-252 875.9 517 86.8
FvH4_4g33280 Fragaria vesca HOM05D005650 ORTHO05D007020 1.3e-248 862.8 517 85.3
Cfa015047 Carpinus fangiana HOM05D005650 ORTHO05D007020 3.1e-234 815.1 518 81.1
Gohir.D02G136500 Gossypium hirsutum HOM05D005650 ORTHO05D007020 5.5e-231 804.3 531 78.0
QL03p037983 Quercus lobata HOM05D005650 ORTHO05D007020 5.5e-231 804.3 518 79.3
Gorai.005G152600 Gossypium raimondii HOM05D005650 ORTHO05D007020 9.4e-231 803.5 531 78.2
CSS0031782 Camellia sinensis var. sinensis HOM05D005650 ORTHO05D007020 4.7e-230 801.2 518 79.0
Thecc.02G307700 Theobroma cacao HOM05D005650 ORTHO05D007020 4.7e-230 801.2 531 78.2
TAR622G0850 Trochodendron aralioides HOM05D005650 ORTHO05D007020 8.0e-230 800.4 519 79.6
Gohir.A03G112000 Gossypium hirsutum HOM05D005650 ORTHO05D007020 1.4e-229 799.7 518 78.6
GSVIVG01011626001 Vitis vinifera HOM05D005650 ORTHO05D007020 1.8e-229 799.3 531 76.3
Haze_10848 Corylus avellana HOM05D005650 ORTHO05D007020 5.2e-229 797.7 531 78.3
Dinv26372 Davidia involucrata HOM05D005650 ORTHO05D007020 1.2e-228 796.6 518 78.2
Atru.chr11.825 Acer truncatum HOM05D005650 ORTHO05D007020 4.8e-227 791.2 531 77.4
Ciclev10014948m.g Citrus clementina HOM05D005650 ORTHO05D007020 1.1e-226 790.0 518 78.6
Duzib248G0273 Durio zibethinus HOM05D005650 ORTHO05D007020 1.2e-225 786.6 518 77.6
CANSAT78G2020 Cannabis sativa HOM05D005650 ORTHO05D007020 5.9e-225 784.3 532 75.8
Psat4g004560 Pisum sativum HOM05D005650 ORTHO05D007020 5.9e-225 784.3 518 77.0
Duzib251G0272 Durio zibethinus HOM05D005650 ORTHO05D007020 2.2e-224 782.3 532 75.8
Glyma.05G240900 Glycine max HOM05D005650 ORTHO05D007020 3.8e-224 781.6 511 76.5
Manes.15G123300 Manihot esculenta HOM05D005650 ORTHO05D007020 8.5e-224 780.4 518 76.8
arahy.Tifrunner.gnm1.ann1.L5UDEC Arachis hypogaea HOM05D005650 ORTHO05D007020 1.9e-223 779.2 531 75.0
Medtr8g105900 Medicago truncatula HOM05D005650 ORTHO05D007020 2.5e-223 778.9 531 75.1
CiPaw.06G055300 Carya illinoinensis HOM05D005650 ORTHO05D007020 1.2e-222 776.5 518 77.0
Hma1.2p1_0192F.1_g083470 Hydrangea macrophylla HOM05D005650 ORTHO05D007020 3.6e-222 775.0 517 75.6
Potri.008G137000 Populus trichocarpa HOM05D005650 ORTHO05D007020 4.7e-222 774.6 518 76.4
Lj4g0026003 Lotus japonicus HOM05D005650 ORTHO05D007020 8.0e-222 773.9 518 76.3
Nn8g41275 Nelumbo nucifera HOM05D005650 ORTHO05D007020 5.2e-221 771.2 520 76.2
Phvul.011G008500 Phaseolus vulgaris HOM05D005650 ORTHO05D007020 8.8e-221 770.4 504 76.4
arahy.Tifrunner.gnm1.ann1.NIUA4E Arachis hypogaea HOM05D005650 ORTHO05D007020 1.5e-220 769.6 561 70.9
FAN07G2273 Fragaria x ananassa HOM05D005650 ORTHO05D007020 1.5e-220 769.6 506 79.4
Glyma.08G047900 Glycine max HOM05D005650 ORTHO05D007020 1.8e-218 762.7 529 74.3
FAN17G2396 Fragaria x ananassa HOM05D005650 ORTHO05D007020 4.1e-218 761.5 506 78.7
Eucgr.B02693 Eucalyptus grandis HOM05D005650 ORTHO05D007020 3.5e-217 758.4 531 73.6
Actinidia12402 Actinidia chinensis HOM05D005650 ORTHO05D007020 1.0e-216 756.9 531 73.4
Sabra08G0104500 Salix brachista HOM05D005650 ORTHO05D007020 1.6e-214 749.6 570 69.5
ECA234G4226 Erigeron canadensis HOM05D005650 ORTHO05D007020 2.8e-214 748.8 519 72.8
Nitab4.5_0002337g0070 Nicotiana tabacum HOM05D005650 ORTHO05D007020 3.6e-214 748.4 528 72.3
TWI74G1652 Tripterygium wilfordii HOM05D005650 ORTHO05D007020 4.7e-214 748.0 533 73.2
Aqoxy2G00265 Aquilegia oxysepala HOM05D005650 ORTHO05D007020 8.0e-214 747.3 520 74.2
Sopen02g013060 Solanum pennellii HOM05D005650 ORTHO05D007020 1.8e-213 746.1 515 73.4
Sc14g0006580 Simmondsia chinensis HOM05D005650 ORTHO05D007020 3.0e-213 745.3 518 73.6
VMungo1127G0110 Vigna mungo HOM05D005650 ORTHO05D007020 6.8e-213 744.2 494 75.7
Rhsim09G0087900 Rhododendron simsii HOM05D005650 ORTHO05D007020 8.8e-213 743.8 508 76.0
MSTRG.23341 Avicennia marina HOM05D005650 ORTHO05D007020 1.2e-212 743.4 518 72.2
Solyc02g062110.4 Solanum lycopersicum HOM05D005650 ORTHO05D007020 1.5e-212 743.0 515 73.2
CAN.G1206.2 Capsicum annuum HOM05D005650 ORTHO05D007020 5.7e-212 741.1 515 72.6
DCAR_023564 Daucus carota HOM05D005650 ORTHO05D007020 9.8e-212 740.3 519 72.6
SGA_v2.0_scaffold111G31522 Striga asiatica HOM05D005650 ORTHO05D007020 1.1e-210 736.9 537 69.8
Cc11_g06590 Coffea canephora HOM05D005650 ORTHO05D007020 1.4e-210 736.5 532 70.9
HanXRQChr17g0565991 Helianthus annuus HOM05D005650 ORTHO05D007020 2.4e-210 735.7 517 71.8
VMungo0251G0664 Vigna mungo HOM05D005650 ORTHO05D007020 4.1e-210 734.9 494 75.5
CsaV3_5G014540 Cucumis sativus L. HOM05D005650 ORTHO05D007020 7.0e-210 734.2 517 72.0
Sed0001111 Sechium edule HOM05D005650 ORTHO05D007020 2.9e-208 728.8 518 71.2
Lsat_1_v5_gn_4_23420 Lactuca sativa HOM05D005650 ORTHO05D007020 1.2e-206 723.4 531 70.4
PSO782G4204 Papaver somniferum HOM05D005650 ORTHO05D007020 1.2e-206 723.4 519 71.1
PSO063G5777 Papaver somniferum HOM05D005650 ORTHO05D007020 2.1e-206 722.6 519 71.3
Lalb_Chr14g0362121 Lupinus albus HOM05D005650 ORTHO05D007020 1.8e-205 719.5 517 69.2
Cpa.g.sc362.1 Carica papaya HOM05D005650 ORTHO05D007020 9.8e-204 713.8 466 77.3
Dinv01894 Davidia involucrata HOM05D005650 ORTHO05D007020 9.8e-204 713.8 486 75.5
AUR62036082 Chenopodium quinoa HOM05D005650 ORTHO05D007020 1.8e-202 709.5 515 68.7
AUR62035393 Chenopodium quinoa HOM05D005650 ORTHO05D007020 9.2e-202 707.2 515 68.9
Hund07852 Selenicereus undatus HOM05D005650 ORTHO05D007020 1.3e-200 703.4 518 68.7
Carub.0002s2663 Capsella rubella HOM05D005650 ORTHO05D007020 7.3e-199 697.6 519 69.4
AT1G80910 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 2.8e-198 695.7 517 69.1
SalBow3G3602 Salvia bowleyana HOM05D005650 ORTHO05D007020 4.7e-198 694.9 535 66.2
BcaB02g07240 Brassica carinata HOM05D005650 ORTHO05D007020 4.4e-196 688.3 519 69.4
AL2G40470 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 5.8e-196 688.0 518 69.1
TPR.G19250 Trifolium pratense HOM05D005650 ORTHO05D007020 1.3e-195 686.8 519 70.3
Thhalv10018445m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 1.4e-194 683.3 520 68.1
Lj6C735G0 Lonicera japonica HOM05D005650 ORTHO05D007020 3.2e-194 682.2 550 65.8
Sp5g34830 Schrenkiella parvula HOM05D005650 ORTHO05D007020 3.2e-194 682.2 520 68.8
Thhalv10007433m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 5.4e-194 681.4 509 69.2
AT1G16020 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 7.0e-194 681.0 522 67.2
C06p29600 Brassica napus HOM05D005650 ORTHO05D007020 9.2e-194 680.6 518 67.8
CARHR073550 Cardamine hirsuta HOM05D005650 ORTHO05D007020 1.6e-193 679.9 517 68.3
Aa31LG4G1220 Aethionema arabicum HOM05D005650 ORTHO05D007020 2.7e-193 679.1 519 68.2
BcaC08g45346 Brassica carinata HOM05D005650 ORTHO05D007020 2.7e-193 679.1 518 67.6
Aa31LG7G600 Aethionema arabicum HOM05D005650 ORTHO05D007020 3.9e-192 675.2 508 67.7
AL1G28180 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 8.6e-192 674.1 522 67.0
Nitab4.5_0000188g0130 Nicotiana tabacum HOM05D005650 ORTHO05D007020 8.6e-192 674.1 520 67.5
BraA07t30337Z Brassica rapa HOM05D005650 ORTHO05D007020 1.5e-191 673.3 538 65.8
A07p26920 Brassica napus HOM05D005650 ORTHO05D007020 1.6e-190 669.8 509 68.0
CARHR016520 Cardamine hirsuta HOM05D005650 ORTHO05D007020 1.1e-189 667.2 509 66.6
BolC6t38125H Brassica oleracea HOM05D005650 ORTHO05D007020 3.1e-189 665.6 538 65.1
Carub.0001s1582 Capsella rubella HOM05D005650 ORTHO05D007020 1.3e-187 660.2 511 65.8
CiPaw.05G158000 Carya illinoinensis HOM05D005650 ORTHO05D007020 6.4e-187 657.9 435 77.5
ATR0021G018 Amborella trichopoda HOM05D005650 ORTHO05D007020 8.3e-187 657.5 513 67.3
Sp1g14330 Schrenkiella parvula HOM05D005650 ORTHO05D007020 1.9e-186 656.4 522 65.7
unitig_21.g20969 Utricularia gibba HOM05D005650 ORTHO05D007020 1.7e-184 649.8 519 64.5
THA.LOC104814015 Tarenaya hassleriana HOM05D005650 ORTHO05D007020 3.0e-184 649.0 538 63.0
BraA09t41479Z Brassica rapa HOM05D005650 ORTHO05D007020 5.2e-181 638.3 523 65.2
C08p44650 Brassica napus HOM05D005650 ORTHO05D007020 1.2e-180 637.1 523 65.0
A09p61060 Brassica napus HOM05D005650 ORTHO05D007020 4.4e-180 635.2 523 65.0
BolC8t52011H Brassica oleracea HOM05D005650 ORTHO05D007020 4.4e-180 635.2 523 65.2
Migut.H02363 Erythranthe guttata HOM05D005650 ORTHO05D007020 3.5e-177 625.5 518 65.6
Os08g0427300 Oryza sativa ssp. japonica HOM05D005650 ORTHO05D007020 1.7e-176 623.2 517 61.5
Ah.01g015510 Amaranthus hybridus HOM05D005650 ORTHO05D007020 6.6e-176 621.3 528 62.9
BcaB03g14509 Brassica carinata HOM05D005650 ORTHO05D007020 1.8e-173 613.2 509 63.7
Peaxi162Scf00439g00528 Petunia axillaris HOM05D005650 ORTHO05D007020 3.1e-173 612.5 515 62.7
PGR004G1106 Punica granatum HOM05D005650 ORTHO05D007020 1.2e-172 610.5 444 71.4
SEGI_01999 Sequoiadendron giganteum HOM05D005650 ORTHO05D007020 1.9e-170 603.2 518 60.0
Zm00001eb179310 Zea mays HOM05D005650 ORTHO05D007020 7.1e-170 601.3 517 60.5
CDE05G1068 Ceratophyllum demersum HOM05D005650 ORTHO05D007020 1.8e-165 586.6 448 68.5
MELO3C026414.2 Cucumis melo HOM05D005650 ORTHO05D007020 5.3e-165 585.1 445 67.4
SHI04292 Sapria himalayana HOM05D005650 ORTHO05D007020 8.4e-163 577.8 497 62.6
COL.COLO4_27613 Corchorus olitorius HOM05D005650 ORTHO05D007020 2.4e-149 533.1 355 76.9
Sed0000862 Sechium edule HOM05D005650 ORTHO05D007020 1.2e-137 494.2 452 60.0
Mapoly0059s0063 Marchantia polymorpha HOM05D005650 ORTHO05D007020 3.4e-124 449.5 523 47.6
HPP92_009689 Vanilla planifolia HOM05D005650 ORTHO05D007020 2.2e-123 446.8 391 60.6
Pp3c16_7940 Physcomitrium patens HOM05D005650 ORTHO05D007020 1.4e-122 444.1 514 47.7
EL10Ac9g20842 Beta vulgaris HOM05D005650 ORTHO05D007020 7.2e-122 441.8 391 59.3
SMO146G0258 Selaginella moellendorffii HOM05D005650 ORTHO05D007020 1.9e-114 417.2 498 43.8
Oeu059514.1 Olea europaea HOM05D005650 ORTHO05D007020 6.1e-105 385.6 472 48.9
AagrBONN_evm.TU.Sc2ySwM_117.2271 Anthoceros agrestis HOM05D005650 ORTHO05D007020 3.8e-99 366.3 485 43.5
Dinv00920 Davidia involucrata HOM05D005650 ORTHO05D007020 5.1e-59 233.0 138 84.1
DCAR_023531 Daucus carota HOM05D005650 ORTHO05D007020 1.8e-56 224.6 453 39.3
Oeu036123.1 Olea europaea HOM05D005650 ORTHO05D007020 1.2e-44 185.3 123 73.2
C06p32880 Brassica napus HOM05D005650 ORTHO05D007020 1.4e-40 171.8 137 68.6
CiPaw.05G157900 Carya illinoinensis HOM05D005650 ORTHO05D007020 1.0e-27 129.0 79 81.0
C05p23900 Brassica napus HOM05D005650 ORTHO05D007020 4.3e-26 123.6 272 35.7
MELO3C019077.2 Cucumis melo HOM05D005650 ORTHO05D007020 6.9e-24 116.3 72 80.6
Lsat_1_v5_gn_2_121941 Lactuca sativa HOM05D005650 ORTHO05D007020 1.2e-23 115.5 78 67.9
Lsat_1_v5_gn_7_69840 Lactuca sativa HOM05D005650 ORTHO05D007020 4.5e-23 113.6 72 72.2
CBR_g31091 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-21 109.0 143 39.9
C06p32890 Brassica napus HOM05D005650 ORTHO05D007020 7.2e-21 106.3 104 57.7
Lsat_1_v5_gn_1_123601 Lactuca sativa HOM05D005650 ORTHO05D007020 3.6e-20 104.0 65 72.3
Cre07.g327000 Chlamydomonas reinhardtii HOM05D005650 ORTHO05D007020 6.9e-16 89.7 250 29.2
BolC6t38409H Brassica oleracea HOM05D005650 ORTHO05D007020 5.1e-11 73.6 117 41.9
CBR_g31097 Chara braunii HOM05D000019 ORTHO05D000048 6.7e-11 73.2 53 56.6
C06p53600 Brassica napus HOM05D005650 ORTHO05D040396 2.9e-06 57.8 40 75.0
Actinidia18430 Actinidia chinensis HOM05D020173 ORTHO05D007020 5.0e-06 57.0 60 50.0


User provided reference genes

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