Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G020500 Prunus persica HOM05D006616 ORTHO05D008435 1.5e-306 1055.4 570 100.0
MD00G1150000 Malus domestica HOM05D006616 ORTHO05D008435 6.8e-190 667.9 511 75.3
RcHm_v2.0_Chr3g0494671 Rosa chinensis HOM05D006616 ORTHO05D008435 5.4e-171 605.1 483 73.3
Dinv27270 Davidia involucrata HOM05D006616 ORTHO05D008435 2.4e-158 563.1 501 66.7
FAN26G1972 Fragaria x ananassa HOM05D006616 ORTHO05D008435 6.7e-153 545.0 468 71.4
CANSAT78G0100 Cannabis sativa HOM05D006616 ORTHO05D008435 8.1e-151 538.1 521 62.4
FAN28G1824 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.9e-147 526.9 469 70.1
FAN19G2668 Fragaria x ananassa HOM05D006616 ORTHO05D008435 5.5e-147 525.4 469 69.1
Hma1.2p1_2178F.1_g316210 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 4.3e-144 515.8 477 65.0
GSVIVG01025818001 Vitis vinifera HOM05D006616 ORTHO05D008435 1.2e-141 507.7 478 65.7
Cfa019948 Carpinus fangiana HOM05D006616 ORTHO05D008435 1.0e-140 504.6 589 56.4
TAR622G0026 Trochodendron aralioides HOM05D006616 ORTHO05D008435 1.3e-140 504.2 511 62.8
CSS0027023 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 1.7e-140 503.8 478 64.6
Atru.chr1.1509 Acer truncatum HOM05D006616 ORTHO05D008435 1.9e-139 500.4 476 63.2
Actinidia03423 Actinidia chinensis HOM05D006616 ORTHO05D008435 4.6e-138 495.7 478 62.6
Lj5g0015037 Lotus japonicus HOM05D006616 ORTHO05D008435 5.7e-136 488.8 582 54.8
CiPaw.10G044000 Carya illinoinensis HOM05D006616 ORTHO05D008435 2.1e-135 486.9 613 54.6
QL07p014063 Quercus lobata HOM05D006616 ORTHO05D008435 3.4e-133 479.6 592 53.4
Ca_02795_v3 Cicer arietinum L. HOM05D006616 ORTHO05D008435 1.7e-132 477.2 575 56.2
Rhsim11G0071400 Rhododendron simsii HOM05D006616 ORTHO05D008435 1.7e-132 477.2 530 57.0
TWI74G0800 Tripterygium wilfordii HOM05D006616 ORTHO05D008435 2.2e-132 476.9 495 60.2
Potri.006G032200 Populus trichocarpa HOM05D006616 ORTHO05D008435 2.9e-132 476.5 483 60.7
Lalb_Chr21g0316821 Lupinus albus HOM05D006616 ORTHO05D008435 1.9e-131 473.8 477 62.9
Cc10_g12770 Coffea canephora HOM05D006616 ORTHO05D008435 1.2e-130 471.1 484 61.8
Manes.09G002500 Manihot esculenta HOM05D006616 ORTHO05D008435 1.2e-130 471.1 468 61.8
Duzib128G1745 Durio zibethinus HOM05D006616 ORTHO05D008435 2.1e-130 470.3 479 61.4
Peaxi162Scf00066g00130 Petunia axillaris HOM05D006616 ORTHO05D008435 7.9e-130 468.4 572 54.4
Thecc.05G123900 Theobroma cacao HOM05D006616 ORTHO05D008435 6.7e-129 465.3 491 60.1
VMungo0720G0485 Vigna mungo HOM05D006616 ORTHO05D008435 8.7e-129 464.9 573 55.8
MBI16_g32949_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 1.9e-128 463.8 534 54.9
Eucgr.A02183 Eucalyptus grandis HOM05D006616 ORTHO05D008435 1.3e-127 461.1 474 61.2
CSS0040058 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 1.6e-127 460.7 571 54.8
Ciclev10011646m.g Citrus clementina HOM05D006616 ORTHO05D008435 2.8e-127 459.9 473 62.2
arahy.Tifrunner.gnm1.ann1.QA0LD5 Arachis hypogaea HOM05D006616 ORTHO05D008435 6.3e-127 458.8 615 53.3
Sabra06G0021500 Salix brachista HOM05D006616 ORTHO05D008435 6.3e-127 458.8 474 61.0
CAN.G526.15 Capsicum annuum HOM05D006616 ORTHO05D008435 4.1e-126 456.1 587 53.2
arahy.Tifrunner.gnm1.ann1.958W0C Arachis hypogaea HOM05D006616 ORTHO05D008435 6.9e-126 455.3 615 52.7
Glyma.02G162000 Glycine max HOM05D006616 ORTHO05D008435 6.9e-126 455.3 574 55.9
PGR042G1816 Punica granatum HOM05D006616 ORTHO05D008435 9.1e-126 454.9 527 56.2
Gorai.007G351400 Gossypium raimondii HOM05D006616 ORTHO05D008435 5.9e-125 452.2 471 60.5
Phvul.007G243700 Phaseolus vulgaris HOM05D006616 ORTHO05D008435 7.7e-125 451.8 579 55.1
Gohir.A11G305800 Gossypium hirsutum HOM05D006616 ORTHO05D008435 1.3e-124 451.1 472 60.4
TPR.G13802 Trifolium pratense HOM05D006616 ORTHO05D008435 1.7e-124 450.7 487 60.0
MSTRG.24176 Avicennia marina HOM05D006616 ORTHO05D008435 2.2e-124 450.3 593 52.1
FvH4_1g29230 Fragaria vesca HOM05D006616 ORTHO05D008435 3.8e-124 449.5 467 64.2
SalBow2G2978 Salvia bowleyana HOM05D006616 ORTHO05D008435 5.0e-124 449.1 586 48.0
Oeu038315.2 Olea europaea HOM05D006616 ORTHO05D008435 6.5e-124 448.7 497 56.9
Nn3g18184 Nelumbo nucifera HOM05D006616 ORTHO05D008435 1.9e-123 447.2 514 58.0
Hund19065 Selenicereus undatus HOM05D006616 ORTHO05D008435 2.5e-123 446.8 528 56.6
CsaV3_3G040470 Cucumis sativus L. HOM05D006616 ORTHO05D008435 4.6e-122 442.6 525 57.7
Ah.13g077310 Amaranthus hybridus HOM05D006616 ORTHO05D008435 6.7e-121 438.7 510 56.5
ECA246G4188 Erigeron canadensis HOM05D006616 ORTHO05D008435 1.5e-120 437.6 588 50.9
Sed0024074 Sechium edule HOM05D006616 ORTHO05D008435 4.4e-120 436.0 584 52.1
Aqoxy3G00148 Aquilegia oxysepala HOM05D006616 ORTHO05D008435 1.3e-119 434.5 517 57.3
HanXRQChr05g0149371 Helianthus annuus HOM05D006616 ORTHO05D008435 1.3e-119 434.5 589 51.4
Gohir.D11G321200 Gossypium hirsutum HOM05D006616 ORTHO05D008435 2.2e-119 433.7 471 59.4
SGA_v2.0_scaffold25G11136 Striga asiatica HOM05D006616 ORTHO05D008435 1.1e-118 431.4 514 56.6
AUR62018417 Chenopodium quinoa HOM05D006616 ORTHO05D008435 2.6e-117 426.8 487 55.2
Medtr1g051155 Medicago truncatula HOM05D006616 ORTHO05D008435 3.4e-117 426.4 496 57.7
AUR62021025 Chenopodium quinoa HOM05D006616 ORTHO05D008435 1.3e-116 424.5 484 55.8
PSO478G1375 Papaver somniferum HOM05D006616 ORTHO05D008435 1.3e-116 424.5 476 58.6
Psat6g087360 Pisum sativum HOM05D006616 ORTHO05D008435 1.4e-115 421.0 466 58.2
ATR0326G030 Amborella trichopoda HOM05D006616 ORTHO05D008435 1.2e-114 417.9 483 57.1
Lj7A350T24 Lonicera japonica HOM05D006616 ORTHO05D008435 2.7e-114 416.8 500 51.0
Migut.N03264 Erythranthe guttata HOM05D006616 ORTHO05D008435 6.1e-114 415.6 586 49.8
Solyc11g005110.3 Solanum lycopersicum HOM05D006616 ORTHO05D008435 6.7e-113 412.1 581 49.7
Sopen11g001110 Solanum pennellii HOM05D006616 ORTHO05D008435 2.0e-112 410.6 581 49.7
CDE04G3611 Ceratophyllum demersum HOM05D006616 ORTHO05D008435 8.2e-111 405.2 483 56.5
EL10Ac3g07308 Beta vulgaris HOM05D006616 ORTHO05D008435 1.1e-110 404.8 524 53.1
THA.LOC104815412 Tarenaya hassleriana HOM05D006616 ORTHO05D008435 1.8e-110 404.1 486 58.2
Aa31LG3G1010 Aethionema arabicum HOM05D006616 ORTHO05D008435 1.4e-105 387.9 501 51.7
Sp4g23340 Schrenkiella parvula HOM05D006616 ORTHO05D008435 6.7e-105 385.6 501 52.1
HPP92_023122 Vanilla planifolia HOM05D006616 ORTHO05D008435 4.4e-104 382.9 471 54.6
Thhalv10002504m.g Eutrema salsugineum HOM05D006616 ORTHO05D008435 1.1e-102 378.3 514 51.6
DCAR_014373 Daucus carota HOM05D006616 ORTHO05D008435 1.4e-102 377.9 633 45.3
Os01g0916300 Oryza sativa ssp. japonica HOM05D006616 ORTHO05D008435 7.0e-102 375.6 581 47.0
BcaC02g12875 Brassica carinata HOM05D006616 ORTHO05D008435 1.6e-101 374.4 485 52.6
Zm00001eb364810 Zea mays HOM05D006616 ORTHO05D008435 3.5e-101 373.2 485 51.5
C04p68740 Brassica napus HOM05D006616 ORTHO05D008435 4.5e-101 372.9 485 49.3
AT2G41020 Arabidopsis thaliana HOM05D006616 ORTHO05D008435 1.0e-100 371.7 485 54.0
AL4G39000 Arabidopsis lyrata HOM05D006616 ORTHO05D008435 2.9e-100 370.2 485 53.8
A04p31340 Brassica napus HOM05D006616 ORTHO05D002641 3.6e-98 363.2 470 51.5
PSO017G2359 Papaver somniferum HOM05D006616 ORTHO05D008435 1.0e-97 361.7 411 58.4
BraA04t18591Z Brassica rapa HOM05D006616 ORTHO05D002641 1.4e-97 361.3 469 53.1
BolC4t28379H Brassica oleracea HOM05D006616 ORTHO05D008435 8.8e-97 358.6 478 48.3
Haze_20291 Corylus avellana HOM05D006616 ORTHO05D008435 1.8e-94 350.9 857 38.4
Carub.0004s2335 Capsella rubella HOM05D006616 ORTHO05D008435 4.5e-93 346.3 501 52.1
ClCG10G015990 Citrullus lanatus HOM05D006616 ORTHO05D008435 5.9e-93 345.9 483 52.0
CARHR136140 Cardamine hirsuta HOM05D006616 ORTHO05D008435 7.7e-93 345.5 441 54.6
Lsat_1_v5_gn_6_110180 Lactuca sativa HOM05D006616 ORTHO05D008435 5.0e-92 342.8 592 46.1
unitig_52.g17546 Utricularia gibba HOM05D006616 ORTHO05D008435 6.5e-92 342.4 483 50.5
MELO3C009780.2 Cucumis melo HOM05D006616 ORTHO05D008435 2.4e-86 323.9 697 41.6
Nitab4.5_0001168g0150 Nicotiana tabacum HOM05D006616 ORTHO05D008435 5.6e-83 312.8 602 38.7
Pp3c10_1890 Physcomitrium patens HOM05D006616 ORTHO05D008435 2.8e-82 310.5 541 45.1
Pp3c10_1896 Physcomitrium patens HOM05D006616 ORTHO05D008435 2.8e-82 310.5 541 45.1
Mapoly0043s0041 Marchantia polymorpha HOM05D006616 ORTHO05D008435 1.0e-81 308.5 558 42.8
Hma1.2p1_2178F.1_g316200 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 2.6e-56 224.2 252 53.2
Nitab4.5_0003863g0020 Nicotiana tabacum HOM05D006616 ORTHO05D008435 3.4e-56 223.8 266 47.4
Sc13g0000840 Simmondsia chinensis HOM05D006616 ORTHO05D008435 3.0e-52 210.7 265 48.3
SEGI_28853 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 1.9e-46 191.4 361 44.0
Cpa.g.sc33.190 Carica papaya HOM05D006616 ORTHO05D008435 3.5e-45 187.2 224 50.9
SEGI_15760 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 3.9e-44 183.7 123 77.2
AagrBONN_evm.TU.Sc2ySwM_228.200 Anthoceros agrestis HOM05D006616 ORTHO05D008435 1.9e-43 181.4 294 41.5
Actinidia25416 Actinidia chinensis HOM05D006616 ORTHO05D008435 9.9e-40 169.1 229 44.5
Nitab4.5_0003863g0030 Nicotiana tabacum HOM05D006616 ORTHO05D008435 9.9e-40 169.1 330 40.0
COL.COLO4_33517 Corchorus olitorius HOM05D006616 ORTHO05D008435 1.1e-35 155.6 154 58.4
vmacro00862 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 3.7e-34 150.6 110 72.7
FAN23G2418 Fragaria x ananassa HOM05D006616 ORTHO05D008435 8.1e-34 149.4 82 95.1
SMO339G0010 Selaginella moellendorffii HOM05D006616 ORTHO05D008435 1.1e-33 149.1 98 76.5
CBR_g8767 Chara braunii HOM05D006616 ORTHO05D008435 5.1e-28 130.2 471 35.0
Psat7g065560 Pisum sativum HOM05D006616 ORTHO05D008435 6.9e-25 119.8 145 51.0
Migut.C01363 Erythranthe guttata HOM05D006616 ORTHO05D008435 2.0e-24 118.2 170 46.5
Psat1g016240 Pisum sativum HOM05D006616 ORTHO05D008435 2.0e-24 118.2 145 51.0
SHI24850 Sapria himalayana HOM05D006616 ORTHO05D008435 6.0e-21 106.7 136 46.3
vmacro00863 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 3.3e-19 100.9 149 45.6
MBI16_g47221_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 1.6e-18 98.6 163 42.3
MCO09G511 Micromonas commoda HOM05D006616 ORTHO05D008435 1.5e-16 92.0 350 30.6
PSO478G1191 Papaver somniferum HOM05D006616 ORTHO05D008435 1.3e-15 89.0 186 46.2
Cre12.g527600 Chlamydomonas reinhardtii HOM05D006616 ORTHO05D008435 1.1e-14 85.9 56 69.6
Actinidia29490 Actinidia chinensis HOM05D006616 ORTHO05D008435 5.1e-12 77.0 87 47.1
BcaC02g07966 Brassica carinata HOM05D001681 ORTHO05D001589 5.7e-11 73.6 50 76.0


User provided reference genes

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