Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 1.6e-151 539.3 256 100.0
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 1.5e-128 463.0 282 77.3
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 4.2e-123 444.9 282 76.6
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 2.9e-116 422.2 282 72.0
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 3.2e-115 418.7 284 71.5
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.2e-114 416.8 290 70.3
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.5e-112 409.8 293 68.9
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 5.7e-112 407.9 280 68.6
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 4.5e-109 398.3 282 66.3
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 1.1e-107 393.7 282 66.0
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 5.7e-104 381.3 274 65.0
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.3e-103 380.2 287 66.2
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 6.3e-103 377.9 289 64.4
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 2.4e-102 375.9 283 64.7
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 1.6e-101 373.2 282 63.8
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 4.5e-101 371.7 274 65.7
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 1.7e-100 369.8 281 63.3
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 6.5e-100 367.9 278 64.4
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 1.5e-99 366.7 280 60.4
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 2.5e-99 365.9 280 64.3
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 5.5e-99 364.8 278 64.0
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 7.2e-99 364.4 276 62.7
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 1.8e-97 359.8 282 61.7
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 5.2e-97 358.2 282 60.3
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 1.5e-96 356.7 278 58.3
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 4.8e-95 351.7 281 59.8
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 1.1e-94 350.5 280 58.2
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 1.4e-94 350.1 284 61.3
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 1.4e-94 350.1 284 61.3
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 5.4e-94 348.2 259 64.5
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 1.2e-93 347.1 280 58.6
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 1.6e-93 346.7 282 59.6
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 2.7e-93 345.9 280 58.6
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 3.5e-93 345.5 288 59.0
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 7.7e-93 344.4 284 59.9
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 1.0e-92 344.0 280 58.2
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 2.9e-92 342.4 280 56.8
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 8.6e-92 340.9 286 58.4
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 1.5e-91 340.1 277 59.6
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 1.9e-91 339.7 284 59.9
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 5.5e-91 338.2 286 57.7
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 2.1e-90 336.3 283 58.3
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 4.7e-90 335.1 270 58.9
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 1.8e-89 333.2 275 58.9
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 1.8e-89 333.2 281 56.9
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 2.3e-89 332.8 277 57.8
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 4.4e-88 328.6 277 57.8
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 7.0e-86 321.2 237 64.1
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 1.6e-85 320.1 256 59.0
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 3.8e-84 315.5 282 56.7
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 6.6e-84 314.7 279 52.7
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 1.5e-83 313.5 245 62.4
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 7.3e-83 311.2 274 55.5
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 3.4e-80 302.4 235 61.3
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 9.8e-80 300.8 276 53.3
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 1.3e-76 290.4 276 50.4
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 2.3e-76 289.7 275 52.4
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 1.5e-75 287.0 252 56.0
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 5.8e-72 275.0 274 47.4
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 3.5e-69 265.8 218 57.8
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 1.1e-67 260.8 192 66.1
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 1.9e-67 260.0 258 51.2
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 2.0e-64 250.0 272 43.4
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 2.2e-63 246.5 334 40.4
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 2.4e-62 243.0 214 56.1
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 1.0e-60 237.7 212 56.1
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 1.7e-60 236.9 223 54.7
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 6.8e-57 224.9 189 55.6
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 1.2e-53 214.2 277 38.3
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 1.6e-53 213.8 131 77.9
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 3.5e-53 212.6 269 38.7
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 3.3e-51 206.1 213 49.8
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 6.2e-50 201.8 272 35.3
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 7.1e-46 188.3 209 47.4
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 2.3e-44 183.3 109 79.8
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 4.8e-42 175.6 228 42.5
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 2.4e-33 146.7 108 61.1
Actinidia36408 Actinidia chinensis HOM05D007847 ORTHO05D009946 1.0e-23 114.8 152 44.7
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 1.0e-23 114.8 72 68.1
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 8.7e-20 101.7 369 24.1
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 6.5e-15 85.5 59 66.1
Zm00001eb340470 Zea mays HOM05D007847 ORTHO05D009946 1.9e-06 57.4 60 46.7
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 2.5e-06 57.0 45 60.0
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 3.2e-06 56.6 94 36.2
MBI01_g18879_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 7.2e-06 55.5 43 53.5


User provided reference genes

Program Settings