Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G200700 Prunus persica HOM05D001601 ORTHO05D002628 1.3e-69 266.2 126 100.0
Prupe.8G166800 Prunus persica HOM05D001601 ORTHO05D002628 3.0e-13 79.0 84 54.8
MD05G1122900 Malus domestica HOM05D001601 ORTHO05D002628 9.6e-12 73.9 84 51.2
Haze_02127 Corylus avellana HOM05D001601 ORTHO05D002628 1.3e-11 73.6 70 61.4
FAN27G2066 Fragaria x ananassa HOM05D001601 ORTHO05D002628 1.8e-10 69.7 106 40.6
RcHm_v2.0_Chr6g0278441 Rosa chinensis HOM05D001601 ORTHO05D002628 3.1e-10 68.9 80 48.8
Cfa005256 Carpinus fangiana HOM05D001601 ORTHO05D002628 5.3e-10 68.2 83 50.6
FvH4_2g15460 Fragaria vesca HOM05D001601 ORTHO05D002628 5.3e-10 68.2 80 48.8
FAN24G0324 Fragaria x ananassa HOM05D001601 ORTHO05D002628 5.3e-10 68.2 80 48.8
FAN20G0314 Fragaria x ananassa HOM05D001601 ORTHO05D002628 6.9e-10 67.8 106 38.7
QL11p050977 Quercus lobata HOM05D001601 ORTHO05D002628 6.9e-10 67.8 83 50.6
Medtr1g112680 Medicago truncatula HOM05D001601 ORTHO05D002628 9.0e-10 67.4 82 50.0
Sabra09G0105900 Salix brachista HOM05D001601 ORTHO05D002628 1.2e-09 67.0 82 50.0
GSVIVG01013720001 Vitis vinifera HOM05D001601 ORTHO05D002628 4.5e-09 65.1 86 45.3
Psat6g232480 Pisum sativum HOM05D001601 ORTHO05D002628 9.9e-09 63.9 79 50.6
Aqoxy2G01591 Aquilegia oxysepala HOM05D001601 ORTHO05D002628 2.2e-08 62.8 82 47.6
GSVIVG01024008001 Vitis vinifera HOM05D001601 ORTHO05D002628 2.9e-08 62.4 89 47.2
Sed0019722 Sechium edule HOM05D001601 ORTHO05D002628 3.8e-08 62.0 85 45.9
Aqoxy4G02705 Aquilegia oxysepala HOM05D001601 ORTHO05D002628 6.4e-08 61.2 82 46.3
Lj5g0000172 Lotus japonicus HOM05D001601 ORTHO05D002628 6.4e-08 61.2 85 45.9
FAN27G2596 Fragaria x ananassa HOM05D001601 ORTHO05D002628 8.4e-08 60.8 83 44.6
MBI08_g34004_MAGBIO Magnolia biondii HOM05D001601 ORTHO05D002628 8.4e-08 60.8 82 45.1
FAN20G1511 Fragaria x ananassa HOM05D001601 ORTHO05D002628 1.1e-07 60.5 89 42.7
Prupe.8G166900 Prunus persica HOM05D001601 ORTHO05D002628 1.1e-07 60.5 82 46.3
Manes.04G072000 Manihot esculenta HOM05D001601 ORTHO05D002628 1.9e-07 59.7 84 44.0
Potri.009G136300 Populus trichocarpa HOM05D001601 ORTHO05D002628 2.4e-07 59.3 83 44.6
TAR381G1205 Trochodendron aralioides HOM05D001601 ORTHO05D002628 2.4e-07 59.3 83 45.8
Peaxi162Scf00070g00045 Petunia axillaris HOM05D001601 ORTHO05D002628 3.2e-07 58.9 83 43.4
Thecc.02G058200 Theobroma cacao HOM05D001601 ORTHO05D002628 3.2e-07 58.9 81 45.7
FvH4_2g15470 Fragaria vesca HOM05D001601 ORTHO05D002628 4.2e-07 58.5 89 41.6
CANSAT25G3111 Cannabis sativa HOM05D001601 ORTHO05D002628 5.5e-07 58.2 88 43.2
FAN15G2735 Fragaria x ananassa HOM05D001601 ORTHO05D002628 5.5e-07 58.2 89 40.4
Gohir.A12G036800 Gossypium hirsutum HOM05D001601 ORTHO05D002628 5.5e-07 58.2 81 45.7
Gohir.D12G035600 Gossypium hirsutum HOM05D001601 ORTHO05D002628 5.5e-07 58.2 81 45.7
Gorai.008G036900 Gossypium raimondii HOM05D001601 ORTHO05D002628 5.5e-07 58.2 81 45.7
ClCG02G004010 Citrullus lanatus HOM05D001601 ORTHO05D002628 7.1e-07 57.8 85 43.5
Glyma.20G107532 Glycine max HOM05D001601 ORTHO05D002628 7.1e-07 57.8 85 43.5
TPR.G2429 Trifolium pratense HOM05D001601 ORTHO05D002628 7.1e-07 57.8 82 45.1
Cc04_g12140 Coffea canephora HOM05D001601 ORTHO05D002628 9.3e-07 57.4 83 42.2
Duzib132G1094 Durio zibethinus HOM05D001601 ORTHO05D002628 9.3e-07 57.4 81 44.4
Atru.chr5.3376 Acer truncatum HOM05D001601 ORTHO05D002628 1.2e-06 57.0 86 40.7
CiPaw.06G121200 Carya illinoinensis HOM05D001601 ORTHO05D002628 1.2e-06 57.0 81 44.4
Ciclev10030105m.g Citrus clementina HOM05D001601 ORTHO05D002628 1.2e-06 57.0 84 40.5
BcaB08g34676 Brassica carinata HOM05D001601 ORTHO05D002628 1.6e-06 56.6 81 42.0
Thhalv10022620m.g Eutrema salsugineum HOM05D001601 ORTHO05D002628 1.6e-06 56.6 81 42.0
A07p04210 Brassica napus HOM05D001601 ORTHO05D002628 2.1e-06 56.2 81 40.7
BraA07t28212Z Brassica rapa HOM05D001601 ORTHO05D002628 2.1e-06 56.2 81 40.7
Glyma.10G281800 Glycine max HOM05D001601 ORTHO05D002628 2.1e-06 56.2 85 42.4
RcHm_v2.0_Chr6g0278471 Rosa chinensis HOM05D001601 ORTHO05D002628 2.1e-06 56.2 88 40.9
Dinv14116 Davidia involucrata HOM05D001601 ORTHO05D002628 2.7e-06 55.8 82 45.1
BcaB03g16426 Brassica carinata HOM05D001601 ORTHO05D002628 3.5e-06 55.5 81 40.7
CSS0000255 Camellia sinensis var. sinensis HOM05D001601 ORTHO05D002628 3.5e-06 55.5 81 42.0
TWI75G1106 Tripterygium wilfordii HOM05D001601 ORTHO05D002628 3.5e-06 55.5 85 43.5
BraA03t13741Z Brassica rapa HOM05D001601 ORTHO05D002628 4.6e-06 55.1 81 39.5
PGR042G3640 Punica granatum HOM05D001601 ORTHO05D002628 4.6e-06 55.1 83 39.8
BcaC01g02972 Brassica carinata HOM05D001601 ORTHO05D002628 6.0e-06 54.7 81 40.7
C03p57610 Brassica napus HOM05D001601 ORTHO05D002628 6.0e-06 54.7 81 40.7
BolC3t18036H Brassica oleracea HOM05D001601 ORTHO05D002628 6.0e-06 54.7 81 40.7
Carub.0003s3072 Capsella rubella HOM05D001601 ORTHO05D002628 6.0e-06 54.7 81 39.5
CARHR107200 Cardamine hirsuta HOM05D001601 ORTHO05D002628 6.0e-06 54.7 81 40.7
arahy.Tifrunner.gnm1.ann1.GJBP3C Arachis hypogaea HOM05D001601 ORTHO05D002628 7.9e-06 54.3 31 80.6


User provided reference genes

Program Settings