Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G147400 Prunus persica HOM05D005168 ORTHO05D006358 2.9e-63 245.0 118 100.0
MD08G1010500 Malus domestica HOM05D005168 ORTHO05D006358 1.2e-53 213.0 118 85.6
Ca_00384_v3 Cicer arietinum L. HOM05D005168 ORTHO05D006358 1.9e-41 172.6 118 68.6
Lalb_Chr11g0067001 Lupinus albus HOM05D005168 ORTHO05D006358 2.4e-41 172.2 116 71.6
Psat5g045240 Pisum sativum HOM05D005168 ORTHO05D006358 9.2e-41 170.2 118 66.9
Medtr3g102420 Medicago truncatula HOM05D005168 ORTHO05D006358 6.0e-40 167.5 116 68.1
CANSAT11G0916 Cannabis sativa HOM05D005168 ORTHO05D006358 3.0e-39 165.2 118 66.9
MELO3C011355.2 Cucumis melo HOM05D005168 ORTHO05D006358 1.5e-38 162.9 118 66.1
Lj1g0018211 Lotus japonicus HOM05D005168 ORTHO05D006358 4.3e-38 161.4 118 64.4
CsaV3_2G024260 Cucumis sativus L. HOM05D005168 ORTHO05D006358 3.6e-37 158.3 118 64.4
CiPaw.07G147200 Carya illinoinensis HOM05D005168 ORTHO05D006358 6.2e-37 157.5 118 65.3
FAN23G3095 Fragaria x ananassa HOM05D005168 ORTHO05D006358 6.2e-37 157.5 118 64.4
Sed0007604 Sechium edule HOM05D005168 ORTHO05D006358 8.1e-37 157.1 118 63.6
arahy.Tifrunner.gnm1.ann1.TKX6L5 Arachis hypogaea HOM05D005168 ORTHO05D006358 1.8e-36 156.0 120 64.2
FvH4_1g24780 Fragaria vesca HOM05D005168 ORTHO05D006358 2.3e-36 155.6 115 65.2
arahy.Tifrunner.gnm1.ann1.GU7A1M Arachis hypogaea HOM05D005168 ORTHO05D006358 3.1e-36 155.2 120 63.3
QL01p031168 Quercus lobata HOM05D005168 ORTHO05D006358 8.9e-36 153.7 117 61.5
Haze_22662 Corylus avellana HOM05D005168 ORTHO05D006358 5.8e-35 151.0 118 61.9
TWI56G1449 Tripterygium wilfordii HOM05D005168 ORTHO05D006358 5.8e-35 151.0 118 65.3
Haze_17776 Corylus avellana HOM05D005168 ORTHO05D006358 1.3e-34 149.8 118 61.0
PGR031G0142 Punica granatum HOM05D005168 ORTHO05D006358 1.7e-34 149.4 118 63.6
Cfa012889 Carpinus fangiana HOM05D005168 ORTHO05D006358 2.2e-34 149.1 118 61.0
Glyma.03G178900 Glycine max HOM05D005168 ORTHO05D006358 1.6e-32 142.9 111 60.4
RcHm_v2.0_Chr2g0124111 Rosa chinensis HOM05D005168 ORTHO05D006358 2.7e-32 142.1 118 58.5
VMungo1080G1160 Vigna mungo HOM05D005168 ORTHO05D006358 3.5e-32 141.7 118 59.3
Eucgr.H00960 Eucalyptus grandis HOM05D005168 ORTHO05D006358 4.6e-32 141.4 118 59.3
Phvul.001G175600 Phaseolus vulgaris HOM05D005168 ORTHO05D006358 4.6e-32 141.4 111 61.3
Thecc.08G047200 Theobroma cacao HOM05D005168 ORTHO05D006358 3.0e-31 138.7 123 60.2
Potri.013G015000 Populus trichocarpa HOM05D005168 ORTHO05D006358 5.1e-31 137.9 119 57.1
Eucgr.C01258 Eucalyptus grandis HOM05D005168 ORTHO05D006358 1.5e-30 136.3 118 57.6
THA.LOC104825468 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 3.3e-30 135.2 113 59.3
Aa31LG4G6030 Aethionema arabicum HOM05D005168 ORTHO05D006358 5.6e-30 134.4 121 57.0
THA.LOC104811420 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 5.6e-30 134.4 121 57.0
TAR622G0958 Trochodendron aralioides HOM05D005168 ORTHO05D006358 5.6e-30 134.4 128 52.3
CARHR146930 Cardamine hirsuta HOM05D005168 ORTHO05D006358 7.3e-30 134.0 121 56.2
AL5G14600 Arabidopsis lyrata HOM05D005168 ORTHO05D006358 1.2e-29 133.3 121 57.0
THA.LOC104825467 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 1.2e-29 133.3 113 58.4
Cpa.g.sc58.102 Carica papaya HOM05D005168 ORTHO05D006358 3.6e-29 131.7 121 55.4
GSVIVG01009945001 Vitis vinifera HOM05D005168 ORTHO05D006358 4.7e-29 131.3 126 53.2
Hma1.2p1_0733F.1_g210170 Hydrangea macrophylla HOM05D005168 ORTHO05D006358 8.1e-29 130.6 119 56.3
AT3G25940 Arabidopsis thaliana HOM05D005168 ORTHO05D006358 1.1e-28 130.2 121 54.5
BcaB03g14336 Brassica carinata HOM05D005168 ORTHO05D006358 1.1e-28 130.2 121 56.2
BcaB03g14344 Brassica carinata HOM05D005168 ORTHO05D006358 1.1e-28 130.2 121 56.2
C07p23400 Brassica napus HOM05D005168 ORTHO05D006358 1.1e-28 130.2 121 56.2
BolC7t42872H Brassica oleracea HOM05D005168 ORTHO05D006358 1.1e-28 130.2 121 56.2
Gohir.A06G002600 Gossypium hirsutum HOM05D005168 ORTHO05D006358 1.1e-28 130.2 120 56.7
Gohir.D06G005600 Gossypium hirsutum HOM05D005168 ORTHO05D006358 1.1e-28 130.2 120 56.7
Gorai.010G002800 Gossypium raimondii HOM05D005168 ORTHO05D006358 1.1e-28 130.2 120 56.7
Nn3g19859 Nelumbo nucifera HOM05D005168 ORTHO05D006358 1.1e-28 130.2 125 51.2
SGA_v2.0_scaffold47G17500 Striga asiatica HOM05D005168 ORTHO05D006358 1.1e-28 130.2 120 54.2
A07p16030 Brassica napus HOM05D005168 ORTHO05D006358 1.4e-28 129.8 121 56.2
BraA07t29331Z Brassica rapa HOM05D005168 ORTHO05D006358 1.4e-28 129.8 121 56.2
CARHR020540 Cardamine hirsuta HOM05D005168 ORTHO05D006358 1.4e-28 129.8 121 56.2
Thhalv10019327m.g Eutrema salsugineum HOM05D005168 ORTHO05D006358 1.8e-28 129.4 121 55.4
Sp1g17830 Schrenkiella parvula HOM05D005168 ORTHO05D006358 3.1e-28 128.6 121 55.4
Duzib093G1099 Durio zibethinus HOM05D005168 ORTHO05D006358 4.0e-28 128.3 121 56.2
Carub.0005s0380 Capsella rubella HOM05D005168 ORTHO05D006358 5.2e-28 127.9 121 54.5
Thhalv10009132m.g Eutrema salsugineum HOM05D005168 ORTHO05D006358 5.2e-28 127.9 121 55.4
SGA_v2.0_scaffold19G08553 Striga asiatica HOM05D005168 ORTHO05D006358 5.2e-28 127.9 120 53.3
Actinidia37940 Actinidia chinensis HOM05D005168 ORTHO05D006358 6.9e-28 127.5 120 53.3
BcaB07g32021 Brassica carinata HOM05D005168 ORTHO05D006358 8.9e-28 127.1 121 53.7
Manes.14G063600 Manihot esculenta HOM05D005168 ORTHO05D006358 8.9e-28 127.1 118 52.5
BcaC05g25900 Brassica carinata HOM05D005168 ORTHO05D006358 2.0e-27 125.9 121 53.7
C05p18550 Brassica napus HOM05D005168 ORTHO05D006358 2.0e-27 125.9 121 53.7
BolC5t30566H Brassica oleracea HOM05D005168 ORTHO05D006358 2.0e-27 125.9 121 53.7
BraA06t24725Z Brassica rapa HOM05D005168 ORTHO05D006358 2.0e-27 125.9 121 53.7
Atru.chr1.3654 Acer truncatum HOM05D005168 ORTHO05D006358 2.6e-27 125.6 122 54.9
A06p16200 Brassica napus HOM05D005168 ORTHO05D006358 2.6e-27 125.6 121 53.7
CAN.G727.4 Capsicum annuum HOM05D005168 ORTHO05D006358 3.4e-27 125.2 120 54.2
Os03g0711700 Oryza sativa ssp. japonica HOM05D005168 ORTHO05D006358 4.4e-27 124.8 125 48.8
CSS0038486 Camellia sinensis var. sinensis HOM05D005168 ORTHO05D006358 5.8e-27 124.4 120 51.7
CSS0004439 Camellia sinensis var. sinensis HOM05D005168 ORTHO05D006358 7.6e-27 124.0 122 50.8
DCAR_015742 Daucus carota HOM05D005168 ORTHO05D006358 1.3e-26 123.2 120 52.5
Peaxi162Scf00553g00216 Petunia axillaris HOM05D005168 ORTHO05D006358 2.2e-26 122.5 120 53.3
Nitab4.5_0000337g0010 Nicotiana tabacum HOM05D005168 ORTHO05D006358 2.9e-26 122.1 120 53.3
Nitab4.5_0003251g0060 Nicotiana tabacum HOM05D005168 ORTHO05D006358 2.9e-26 122.1 120 53.3
MSTRG.22344 Avicennia marina HOM05D005168 ORTHO05D006358 8.4e-26 120.6 118 50.8
CDE11G0347 Ceratophyllum demersum HOM05D005168 ORTHO05D006358 8.4e-26 120.6 123 48.8
PSO541G4324 Papaver somniferum HOM05D005168 ORTHO05D006358 1.1e-25 120.2 124 47.6
PSO675G5410 Papaver somniferum HOM05D005168 ORTHO05D006358 1.1e-25 120.2 124 47.6
Solyc04g054510.4 Solanum lycopersicum HOM05D005168 ORTHO05D006358 1.4e-25 119.8 120 51.7
PGSC0003DMG400022038 Solanum tuberosum HOM05D005168 ORTHO05D006358 1.4e-25 119.8 120 51.7
SalBow8G1113 Salvia bowleyana HOM05D005168 ORTHO05D006358 2.4e-25 119.0 118 50.0
Sc15g0004820 Simmondsia chinensis HOM05D005168 ORTHO05D006358 3.2e-25 118.6 126 49.2
vmacro04368 Vaccinium macrocarpon HOM05D005168 ORTHO05D006358 1.2e-24 116.7 119 50.4
Cc10_g01450 Coffea canephora HOM05D005168 ORTHO05D006358 2.1e-24 115.9 114 51.8
Zm00001eb054840 Zea mays HOM05D005168 ORTHO05D006358 2.1e-24 115.9 118 49.2
EL10Ac1g02165 Beta vulgaris HOM05D005168 ORTHO05D006358 6.0e-24 114.4 126 47.6
ECA238G1857 Erigeron canadensis HOM05D005168 ORTHO05D006358 2.3e-23 112.5 111 47.7
FAN26G0870 Fragaria x ananassa HOM05D005168 ORTHO05D006358 3.9e-23 111.7 68 75.0
Migut.N03173 Erythranthe guttata HOM05D005168 ORTHO05D006358 8.7e-23 110.5 118 46.6
Rhsim07G0250400 Rhododendron simsii HOM05D005168 ORTHO05D006358 1.9e-22 109.4 117 49.6
Lsat_1_v5_gn_2_14120 Lactuca sativa HOM05D005168 ORTHO05D006358 4.3e-22 108.2 111 46.8
Ciclev10003775m.g Citrus clementina HOM05D005168 ORTHO05D006358 5.6e-22 107.8 123 46.3
Hund09202 Selenicereus undatus HOM05D005168 ORTHO05D006358 5.6e-22 107.8 126 46.0
Sabra13G0016900 Salix brachista HOM05D005168 ORTHO05D006358 9.6e-22 107.1 97 54.6
Sabra13G0012900 Salix brachista HOM05D005168 ORTHO05D006358 4.8e-21 104.8 95 54.7
unitig_22.g6797 Utricularia gibba HOM05D005168 ORTHO05D006358 4.8e-21 104.8 118 46.6
Dinv40488 Davidia involucrata HOM05D005168 ORTHO05D006358 1.4e-20 103.2 103 53.4
HanXRQChr04g0101211 Helianthus annuus HOM05D005168 ORTHO05D006358 4.0e-20 101.7 111 44.1
SEGI_04309 Sequoiadendron giganteum HOM05D005168 ORTHO05D006358 1.2e-19 100.1 126 42.1
Sopen04g024330 Solanum pennellii HOM05D005168 ORTHO05D006358 2.0e-19 99.4 107 49.5
Aqoxy2G01931 Aquilegia oxysepala HOM05D005168 ORTHO05D006358 9.9e-19 97.1 122 42.6
Mapoly0043s0107 Marchantia polymorpha HOM05D005168 ORTHO05D006358 3.8e-18 95.1 128 38.3
AagrBONN_evm.TU.Sc2ySwM_368.3393 Anthoceros agrestis HOM05D005168 ORTHO05D006358 1.1e-17 93.6 119 38.7
Eucgr.L01842 Eucalyptus grandis HOM05D005168 ORTHO05D006358 5.4e-17 91.3 79 55.7
TPR.G9182 Trifolium pratense HOM05D005168 ORTHO05D006358 9.3e-17 90.5 81 55.6
Eucgr.F02832 Eucalyptus grandis HOM05D005168 ORTHO05D006358 4.3e-14 81.6 79 50.6
MD15G1010600 Malus domestica HOM05D005168 ORTHO05D006358 1.6e-13 79.7 54 64.8
Glyma.17G201200 Glycine max HOM05D005168 ORTHO05D006358 2.1e-13 79.3 118 43.2
AL1G32870 Arabidopsis lyrata HOM05D005168 ORTHO05D006358 3.7e-13 78.6 67 55.2
Glyma.06G213500 Glycine max HOM05D005168 ORTHO05D006358 6.2e-13 77.8 65 60.0
Glyma.08G301902 Glycine max HOM05D005168 ORTHO05D006358 1.1e-12 77.0 118 42.4
AT1G20065 Arabidopsis thaliana HOM05D005168 ORTHO05D006358 1.8e-12 76.3 62 56.5
Glyma.11G172400 Glycine max HOM05D005168 ORTHO05D006358 2.4e-12 75.9 67 56.7
Pp3c24_7070 Physcomitrium patens HOM05D005168 ORTHO05D006358 3.1e-12 75.5 156 28.2
Ca_15982_v3 Cicer arietinum L. HOM05D005168 ORTHO05D006358 5.3e-12 74.7 53 58.5
Glyma.08G246200 Glycine max HOM05D005168 ORTHO05D006358 5.3e-12 74.7 58 60.3
Cre01.g018000 Chlamydomonas reinhardtii HOM05D005168 ORTHO05D006358 6.9e-12 74.3 122 35.2
HPP92_028162 Vanilla planifolia HOM05D005168 ORTHO05D006358 1.5e-11 73.2 88 42.0
SMO351G0141 Selaginella moellendorffii HOM05D005168 ORTHO05D006358 2.6e-11 72.4 110 36.4
Glyma.19G179600 Glycine max HOM05D005168 ORTHO05D006358 3.4e-11 72.0 62 51.6
ATR0057G015 Amborella trichopoda HOM05D005168 ORTHO05D006358 4.5e-11 71.6 86 43.0
BcaC05g25904 Brassica carinata HOM05D005168 ORTHO05D006358 3.8e-10 68.6 98 41.8
Aqoxy6G02286 Aquilegia oxysepala HOM05D005168 ORTHO05D006358 1.4e-09 66.6 113 35.4
ClCG08G014180 Citrullus lanatus HOM05D005168 ORTHO05D006358 4.2e-09 65.1 87 47.1
ClCG08G014170 Citrullus lanatus HOM05D005168 ORTHO05D006358 7.1e-09 64.3 40 67.5
arahy.Tifrunner.gnm1.ann1.BQ9Q0E Arachis hypogaea HOM05D005168 ORTHO05D006358 9.3e-09 63.9 56 57.1
CDE09G0329 Ceratophyllum demersum HOM05D005168 ORTHO05D006358 1.2e-08 63.5 76 46.1
THA.LOC109116732 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 4.6e-08 61.6 45 60.0
MSTRG.17362 Avicennia marina HOM05D006029 ORTHO05D007439 1.0e-07 60.5 116 33.6
unitig_60.g25801 Utricularia gibba HOM05D006029 ORTHO05D007439 3.3e-06 55.5 53 50.9
SGA_v2.0_scaffold22G09953 Striga asiatica HOM05D006029 ORTHO05D007439 5.6e-06 54.7 113 31.0


User provided reference genes

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