Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G091200 Prunus persica HOM05D000162 ORTHO05D000090 3.1e-48 196.8 232 100.0
Prupe.8G027800 Prunus persica HOM05D000162 ORTHO05D000090 5.4e-24 116.3 85 85.9
Prupe.6G081600 Prunus persica HOM05D000162 ORTHO05D000090 3.5e-23 113.6 86 87.2
Prupe.3G114700 Prunus persica HOM05D000162 ORTHO05D000090 1.0e-22 112.1 86 81.4
Prupe.6G091000 Prunus persica HOM05D000162 ORTHO05D000090 1.3e-22 111.7 86 88.4
Prupe.3G138000 Prunus persica HOM05D000162 ORTHO05D000090 3.3e-21 107.1 84 81.0
Prupe.6G091400 Prunus persica HOM05D000162 ORTHO05D000090 1.2e-20 105.1 83 88.0
Prupe.6G094000 Prunus persica HOM05D000162 ORTHO05D000090 2.1e-20 104.4 86 80.2
FAN16G3207 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.3e-19 100.9 84 75.0
FAN25G0716 Fragaria x ananassa HOM05D000162 ORTHO05D000090 5.2e-19 99.8 84 72.6
RcHm_v2.0_Chr5g0077441 Rosa chinensis HOM05D000162 ORTHO05D000090 5.2e-19 99.8 84 75.0
Prupe.6G093300 Prunus persica HOM05D000162 ORTHO05D000090 8.9e-19 99.0 235 51.9
Prupe.6G106300 Prunus persica HOM05D000162 ORTHO05D000090 2.0e-18 97.8 84 78.6
FAN25G0683 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.6e-18 97.4 84 59.5
FAN21G1717 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.4e-18 96.7 84 75.0
FAN21G3095 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.4e-18 96.7 84 58.3
FAN21G3177 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.4e-18 96.7 84 58.3
FAN16G0746 Fragaria x ananassa HOM05D000162 ORTHO05D000090 7.5e-18 95.9 84 66.7
RcHm_v2.0_Chr5g0073761 Rosa chinensis HOM05D000162 ORTHO05D000090 7.5e-18 95.9 82 61.0
RcHm_v2.0_Chr5g0071481 Rosa chinensis HOM05D000162 ORTHO05D000090 1.7e-17 94.7 84 58.3
RcHm_v2.0_Chr5g0069581 Rosa chinensis HOM05D000162 ORTHO05D000090 2.9e-17 94.0 84 73.8
FvH4_3g35200 Fragaria vesca HOM05D000162 ORTHO05D000090 3.7e-17 93.6 84 73.8
Prupe.6G087600 Prunus persica HOM05D000162 ORTHO05D000090 6.4e-17 92.8 83 57.8
RcHm_v2.0_Chr5g0073691 Rosa chinensis HOM05D000162 ORTHO05D000090 6.4e-17 92.8 84 72.6
FvH4_3g38020 Fragaria vesca HOM05D000162 ORTHO05D000090 8.3e-17 92.4 84 71.4
FvH4_3g38070 Fragaria vesca HOM05D000162 ORTHO05D000090 8.3e-17 92.4 84 71.4
FvH4_3g39940 Fragaria vesca HOM05D000162 ORTHO05D000090 8.3e-17 92.4 84 56.0
FAN07G1221 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.3e-17 92.4 84 70.2
RcHm_v2.0_Chr5g0069321 Rosa chinensis HOM05D000162 ORTHO05D000090 8.3e-17 92.4 84 73.8
MD11G1115600 Malus domestica HOM05D000162 ORTHO05D000090 1.4e-16 91.7 80 57.5
FvH4_3g13950 Fragaria vesca HOM05D000162 ORTHO05D000090 1.9e-16 91.3 84 71.4
FvH4_3g37481 Fragaria vesca HOM05D000162 ORTHO05D000090 1.9e-16 91.3 84 70.2
FAN11G0787 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.9e-16 91.3 84 71.4
RcHm_v2.0_Chr5g0069601 Rosa chinensis HOM05D000162 ORTHO05D000090 1.9e-16 91.3 84 72.6
RcHm_v2.0_Chr5g0074951 Rosa chinensis HOM05D000162 ORTHO05D000090 2.4e-16 90.9 84 66.7
RcHm_v2.0_Chr5g0061091 Rosa chinensis HOM05D000162 ORTHO05D000090 4.1e-16 90.1 82 54.9
FvH4_3g38590 Fragaria vesca HOM05D000162 ORTHO05D000090 7.1e-16 89.4 83 69.9
FvH4_3g39890 Fragaria vesca HOM05D000162 ORTHO05D000090 7.1e-16 89.4 84 54.8
FAN05G1965 Fragaria x ananassa HOM05D000162 ORTHO05D000090 7.1e-16 89.4 83 54.2
FAN05G5487 Fragaria x ananassa HOM05D000162 ORTHO05D000090 7.1e-16 89.4 83 69.9
FvH4_5g09470 Fragaria vesca HOM05D000162 ORTHO05D000090 1.2e-15 88.6 83 72.3
MD11G1126400 Malus domestica HOM05D000162 ORTHO05D000090 1.6e-15 88.2 83 60.2
FvH4_3g44300 Fragaria vesca HOM05D000162 ORTHO05D000090 2.1e-15 87.8 83 69.9
FAN05G5335 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.1e-15 87.8 83 69.9
FAN11G0256 Fragaria x ananassa HOM05D000366 ORTHO05D000090 2.1e-15 87.8 83 69.9
MD03G1113300 Malus domestica HOM05D000162 ORTHO05D000090 2.1e-15 87.8 85 54.1
FvH4_3g38940 Fragaria vesca HOM05D000162 ORTHO05D000090 2.7e-15 87.4 84 67.9
FAN05G2167 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.7e-15 87.4 83 67.5
FAN05G2421 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.7e-15 87.4 83 67.5
FAN05G2783 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.7e-15 87.4 83 68.7
FAN05G5046 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.7e-15 87.4 83 68.7
RcHm_v2.0_Chr5g0071941 Rosa chinensis HOM05D000162 ORTHO05D000090 2.7e-15 87.4 78 57.7
RcHm_v2.0_Chr5g0077521 Rosa chinensis HOM05D000162 ORTHO05D000090 2.7e-15 87.4 81 54.3
FAN11G3989 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.5e-15 87.0 83 56.6
MD03G1103700 Malus domestica HOM05D000162 ORTHO05D000090 4.6e-15 86.7 84 75.0
FAN11G1863 Fragaria x ananassa HOM05D000162 ORTHO05D000090 6.0e-15 86.3 81 70.4
RcHm_v2.0_Chr5g0074141 Rosa chinensis HOM05D000162 ORTHO05D000090 6.0e-15 86.3 84 67.9
FAN11G2810 Fragaria x ananassa HOM05D000162 ORTHO05D000090 7.8e-15 85.9 84 66.7
FAN25G2428 Fragaria x ananassa HOM05D000162 ORTHO05D000090 7.8e-15 85.9 84 66.7
FvH4_3g40130 Fragaria vesca HOM05D000162 ORTHO05D000090 1.0e-14 85.5 84 51.2
FAN05G0618 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.0e-14 85.5 84 66.7
FAN05G1495 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.0e-14 85.5 83 67.5
FAN05G4140 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.0e-14 85.5 83 67.5
RcHm_v2.0_Chr5g0074991 Rosa chinensis HOM05D000162 ORTHO05D000090 1.0e-14 85.5 86 70.9
Prupe.6G090500 Prunus persica HOM05D000162 ORTHO05D000090 1.3e-14 85.1 50 82.0
FvH4_3g42430 Fragaria vesca HOM05D000162 ORTHO05D000090 1.7e-14 84.7 84 51.2
FvH4_4g22280 Fragaria vesca HOM05D000162 ORTHO05D000090 1.7e-14 84.7 84 52.4
FAN25G3795 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.7e-14 84.7 83 53.0
FAN16G0319 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.3e-14 84.3 84 70.2
FAN21G1117 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.0e-14 84.0 83 66.3
FAN05G5463 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.9e-14 83.6 83 66.3
FAN16G3170 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.9e-14 83.6 83 66.3
FAN12G2315 Fragaria x ananassa HOM05D000162 ORTHO05D000090 5.1e-14 83.2 84 61.9
Prupe.6G195600 Prunus persica HOM05D000162 ORTHO05D000090 5.1e-14 83.2 53 79.2
FAN16G2089 Fragaria x ananassa HOM05D000162 ORTHO05D000090 6.6e-14 82.8 84 51.2
FAN11G2213 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.6e-14 82.4 83 50.6
RcHm_v2.0_Chr5g0027731 Rosa chinensis HOM05D000162 ORTHO05D000090 8.6e-14 82.4 52 71.2
FAN11G3383 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.1e-13 82.0 84 69.0
FAN16G1190 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.1e-13 82.0 83 51.8
FAN07G1899 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.5e-13 81.6 83 51.8
FAN21G2825 Fragaria x ananassa HOM05D000162 ORTHO05D003288 1.5e-13 81.6 83 67.5
FAN25G0639 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.5e-13 81.6 84 64.3
FvH4_3g41820 Fragaria vesca HOM05D000162 ORTHO05D000090 1.9e-13 81.3 84 69.0
FAN11G2311 Fragaria x ananassa HOM05D000366 ORTHO05D000437 2.5e-13 80.9 84 64.3
FAN21G2507 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.5e-13 80.9 83 69.9
FAN21G0653 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.3e-13 80.1 79 63.3
RcHm_v2.0_Chr5g0074981 Rosa chinensis HOM05D000162 ORTHO05D000090 5.6e-13 79.7 82 68.3
FvH4_4g22270 Fragaria vesca HOM05D000162 ORTHO05D000090 7.3e-13 79.3 83 50.6
FAN11G1276 Fragaria x ananassa HOM05D000162 ORTHO05D000090 9.5e-13 79.0 83 49.4
RcHm_v2.0_Chr5g0075791 Rosa chinensis HOM05D000162 ORTHO05D003288 1.2e-12 78.6 53 67.9
FAN17G0052 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.6e-12 78.2 84 61.9
RcHm_v2.0_Chr5g0072861 Rosa chinensis HOM05D000162 ORTHO05D000090 1.6e-12 78.2 53 69.8
FAN21G0456 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.1e-12 77.8 84 69.0
RcHm_v2.0_Chr5g0069351 Rosa chinensis HOM05D000162 ORTHO05D000090 2.1e-12 77.8 52 67.3
FvH4_6g52550 Fragaria vesca HOM05D000162 ORTHO05D000090 4.7e-12 76.6 84 67.9
RcHm_v2.0_Chr5g0076241 Rosa chinensis HOM05D000162 ORTHO05D000090 4.7e-12 76.6 53 67.9
FAN16G0671 Fragaria x ananassa HOM05D000162 ORTHO05D000090 6.2e-12 76.3 53 66.0
MD03G1113100 Malus domestica HOM05D000162 ORTHO05D000090 6.2e-12 76.3 80 51.2
FvH4_3g40940 Fragaria vesca HOM05D000162 ORTHO05D000090 8.1e-12 75.9 53 66.0
FAN11G2742 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.1e-12 75.9 53 66.0
FAN21G1710 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.1e-12 75.9 53 66.0
RcHm_v2.0_Chr5g0072921 Rosa chinensis HOM05D001814 ORTHO05D000090 1.1e-11 75.5 53 67.9
RcHm_v2.0_Chr5g0072901 Rosa chinensis HOM05D000162 ORTHO05D000090 1.4e-11 75.1 84 63.1
FAN21G0314 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.8e-11 74.7 53 62.3
FAN25G0672 Fragaria x ananassa HOM05D004391 ORTHO05D000090 1.8e-11 74.7 53 64.2
FAN11G2376 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.1e-11 73.9 53 64.2
FAN25G2369 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.1e-11 73.9 53 62.3
FAN21G1786 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.0e-11 73.6 53 62.3
FAN05G3453 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.9e-11 72.4 51 62.7
FAN16G0884 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.9e-11 72.4 53 60.4
FAN16G0919 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.9e-11 72.4 76 48.7
FAN11G2498 Fragaria x ananassa HOM05D000044 ORTHO05D000090 1.2e-10 72.0 52 63.5
RcHm_v2.0_Chr5g0076231 Rosa chinensis HOM05D000162 ORTHO05D000090 1.5e-10 71.6 84 63.1
MD03G1113600 Malus domestica HOM05D000162 ORTHO05D000090 2.0e-10 71.2 51 68.6
RcHm_v2.0_Chr5g0069231 Rosa chinensis HOM05D000162 ORTHO05D000090 2.6e-10 70.9 47 70.2
RcHm_v2.0_Chr5g0041821 Rosa chinensis HOM05D000162 ORTHO05D000090 3.4e-10 70.5 46 71.7
FvH4_3g37480 Fragaria vesca HOM05D000162 ORTHO05D000090 4.4e-10 70.1 84 46.4
MD11G1128400 Malus domestica HOM05D000162 ORTHO05D000090 7.6e-10 69.3 84 47.6
FAN16G0588 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.3e-09 68.6 84 42.9
FAN16G2035 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.7e-09 68.2 50 62.0
FAN11G0418 Fragaria x ananassa HOM05D003757 ORTHO05D000090 1.1e-08 65.5 80 41.2
FAN11G3239 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.1e-08 65.5 80 41.2
FAN25G3591 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.1e-08 65.5 84 58.3
Migut.F00914 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.9e-08 64.7 79 40.5
Prupe.6G090600 Prunus persica HOM05D000162 ORTHO05D000090 5.4e-08 63.2 53 60.4
Migut.F00916 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.2e-07 62.0 81 39.5
FAN05G4021 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.2e-07 62.0 83 56.6
Actinidia08438 Actinidia chinensis HOM05D000162 ORTHO05D000090 1.6e-07 61.6 82 36.6
FAN11G1758 Fragaria x ananassa HOM05D004321 ORTHO05D004889 1.6e-07 61.6 41 73.2
Prupe.6G087400 Prunus persica HOM05D000162 ORTHO05D010307 2.7e-07 60.8 50 64.0
FAN21G2702 Fragaria x ananassa HOM05D009519 ORTHO05D010307 3.5e-07 60.5 41 73.2
MD11G1126500 Malus domestica HOM05D000162 ORTHO05D000090 3.5e-07 60.5 84 61.9
vmacro13730 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 4.6e-07 60.1 82 34.1
FvH4_3g43150 Fragaria vesca HOM05D000162 ORTHO05D000090 6.0e-07 59.7 84 36.9
FvH4_3g43170 Fragaria vesca HOM05D000162 ORTHO05D000090 6.0e-07 59.7 84 36.9
MD03G1113700 Malus domestica HOM05D010115 ORTHO05D010307 6.0e-07 59.7 39 66.7
Cc06_g18850 Coffea canephora HOM05D000162 ORTHO05D000090 7.8e-07 59.3 85 37.6
Migut.M00051 Erythranthe guttata HOM05D000162 ORTHO05D000090 7.8e-07 59.3 79 35.4
Hma1.2p1_1276F.1_g272140 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 7.8e-07 59.3 84 35.7
MD03G1107100 Malus domestica HOM05D000162 ORTHO05D000090 1.0e-06 58.9 82 45.1
vmacro13800 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 1.0e-06 58.9 82 32.9
Hma1.2p1_1798F.1_g302890 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 1.3e-06 58.5 84 35.7
FAN05G5266 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.7e-06 58.2 83 55.4
SalBow1G7352 Salvia bowleyana HOM05D000162 ORTHO05D000090 1.7e-06 58.2 83 38.6
CSS0041306 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 2.3e-06 57.8 78 39.7
Dinv41259 Davidia involucrata HOM05D000162 ORTHO05D000090 2.3e-06 57.8 84 36.9
vmacro08419 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 2.3e-06 57.8 85 37.6
vmacro13797 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 2.3e-06 57.8 82 35.4
CSS0018187 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 3.0e-06 57.4 84 56.0
CSS0025424 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 3.0e-06 57.4 84 56.0
CSS0032657 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 3.0e-06 57.4 84 54.8
Rhsim04G0181900 Rhododendron simsii HOM05D000162 ORTHO05D000090 3.0e-06 57.4 86 34.9
vmacro13802 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 3.0e-06 57.4 82 32.9
Actinidia04475 Actinidia chinensis HOM05D000162 ORTHO05D000090 3.9e-06 57.0 82 36.6
vmacro08416 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 3.9e-06 57.0 82 51.2
CSS0005197 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 5.1e-06 56.6 84 56.0
CSS0009041 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 5.1e-06 56.6 84 56.0
Rhsim04G0181600 Rhododendron simsii HOM05D000162 ORTHO05D000090 5.1e-06 56.6 86 33.7
vmacro13803 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 5.1e-06 56.6 84 34.5
Actinidia04470 Actinidia chinensis HOM05D000162 ORTHO05D000090 6.6e-06 56.2 83 37.3
CSS0011266 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 6.6e-06 56.2 84 56.0
Cc00_g03850 Coffea canephora HOM05D000162 ORTHO05D000090 6.6e-06 56.2 83 33.7
Prupe.6G086000 Prunus persica HOM05D000162 ORTHO05D000090 6.6e-06 56.2 81 42.0
SGA_v2.0_scaffold19G08834 Striga asiatica HOM05D000162 ORTHO05D000090 6.6e-06 56.2 83 36.1
CSS0038623 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 8.7e-06 55.8 84 40.5
FvH4_3g38931 Fragaria vesca HOM05D000162 ORTHO05D000090 8.7e-06 55.8 84 52.4
FAN04G2497 Fragaria x ananassa HOM05D003302 ORTHO05D003785 8.7e-06 55.8 72 61.1
SalBow1G2657 Salvia bowleyana HOM05D000162 ORTHO05D000090 8.7e-06 55.8 83 37.3
vmacro08418 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 8.7e-06 55.8 80 35.0


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