Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 1.4e-161 573.2 359 100.0
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 2.8e-109 399.4 366 73.0
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 9.1e-108 394.4 356 71.6
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 1.6e-91 340.5 293 66.2
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 2.8e-88 329.7 384 58.6
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 6.8e-87 325.1 293 64.5
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 2.0e-86 323.6 294 64.3
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.3e-82 310.8 279 64.2
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 5.1e-82 308.9 279 63.8
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.2e-80 304.3 308 59.4
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 1.6e-80 303.9 365 57.8
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 6.2e-80 302.0 293 58.4
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 1.1e-79 301.2 371 57.1
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 1.8e-79 300.4 386 48.7
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 5.2e-79 298.9 368 59.5
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 2.6e-78 296.6 307 60.3
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 3.4e-78 296.2 368 53.5
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 9.9e-78 294.7 289 57.8
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 1.1e-76 291.2 296 64.9
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 1.6e-75 287.3 279 58.8
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 3.5e-75 286.2 366 56.0
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 7.8e-75 285.0 368 57.9
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 7.8e-75 285.0 382 53.7
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 3.9e-74 282.7 290 56.6
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 5.1e-74 282.3 290 54.8
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 4.3e-73 279.3 359 49.6
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 1.2e-72 277.7 365 55.9
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 3.6e-72 276.2 383 51.7
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 1.8e-71 273.9 376 48.4
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 4.0e-71 272.7 368 56.8
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 2.0e-70 270.4 363 56.5
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 4.4e-70 269.2 292 54.8
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 4.4e-70 269.2 291 55.7
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 5.8e-70 268.9 498 39.0
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 1.7e-69 267.3 367 51.5
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 2.2e-69 266.9 303 53.1
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 2.2e-69 266.9 291 55.0
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 3.8e-69 266.2 287 54.4
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 8.4e-69 265.0 291 55.7
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 1.9e-68 263.8 289 53.3
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 1.9e-68 263.8 282 53.9
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 1.9e-68 263.8 360 53.1
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 2.4e-68 263.5 297 53.5
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 4.2e-68 262.7 374 52.9
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 5.4e-68 262.3 287 53.0
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 5.4e-68 262.3 303 53.5
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 1.2e-67 261.2 291 52.9
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 2.7e-67 260.0 376 49.7
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 3.5e-67 259.6 377 52.8
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 3.5e-67 259.6 312 51.3
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 4.6e-67 259.2 362 54.1
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 4.6e-67 259.2 293 53.9
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 6.0e-67 258.8 278 56.1
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 7.8e-67 258.5 371 53.9
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 7.8e-67 258.5 305 52.5
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 3.0e-66 256.5 367 53.7
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 3.9e-66 256.1 304 52.3
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 1.1e-65 254.6 292 53.8
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 1.9e-65 253.8 278 55.0
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 3.3e-65 253.1 355 48.2
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 5.6e-65 252.3 291 52.9
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 8.1e-64 248.4 368 54.6
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 1.1e-63 248.1 299 52.2
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 2.4e-63 246.9 289 60.2
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 4.0e-63 246.1 297 50.8
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 5.3e-63 245.7 371 52.3
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 9.0e-63 245.0 291 50.9
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 2.0e-62 243.8 364 52.7
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 4.4e-62 242.7 376 51.1
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 4.4e-62 242.7 275 54.9
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 7.6e-62 241.9 206 65.5
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 1.1e-60 238.0 287 52.3
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 1.4e-60 237.7 291 50.2
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 2.4e-60 236.9 374 48.9
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 2.4e-60 236.9 266 53.4
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 3.2e-60 236.5 359 53.5
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 7.1e-60 235.3 275 53.8
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 1.6e-59 234.2 278 51.4
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 1.6e-59 234.2 372 50.5
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 6.0e-59 232.3 282 51.4
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 1.7e-58 230.7 283 52.7
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 3.9e-58 229.6 366 47.8
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 8.7e-58 228.4 372 50.3
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 1.5e-57 227.6 273 52.4
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 2.1e-56 223.8 333 43.8
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 6.2e-56 222.2 294 49.0
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 1.8e-55 220.7 225 58.2
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 2.4e-55 220.3 359 44.6
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 5.3e-55 219.2 277 51.3
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 2.0e-54 217.2 283 47.3
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 7.6e-54 215.3 254 52.4
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 1.4e-52 211.1 153 72.5
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 2.3e-50 203.8 274 46.0
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 6.7e-50 202.2 280 47.5
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 2.5e-49 200.3 286 48.3
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 5.6e-49 199.1 415 37.6
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 2.1e-48 197.2 290 45.2
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 4.8e-48 196.1 151 66.9
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 2.0e-46 190.7 240 50.4
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 1.3e-45 188.0 295 42.7
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 2.9e-45 186.8 302 43.4
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 4.2e-44 183.0 346 39.9
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 1.2e-43 181.4 361 38.8
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 7.4e-41 172.2 295 43.4
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 2.1e-40 170.6 230 46.1
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 8.2e-40 168.7 262 42.4
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 6.9e-39 165.6 270 44.4
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 1.8e-31 141.0 307 36.5
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 1.2e-30 138.3 259 45.6
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 4.2e-28 129.8 293 35.5
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 5.5e-28 129.4 248 36.3
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 1.8e-26 124.4 252 33.3
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 1.5e-25 121.3 154 46.1
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 1.2e-22 111.7 96 65.6
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 4.5e-22 109.8 214 37.4
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 8.5e-21 105.5 91 63.7
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 2.5e-20 104.0 294 32.3
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 2.3e-18 97.4 293 30.7
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 8.8e-18 95.5 104 54.8
BolC4t27428H Brassica oleracea HOM05D006271 ORTHO05D023853 1.2e-11 75.1 203 36.5
C04p59170 Brassica napus HOM05D006271 ORTHO05D023853 6.1e-11 72.8 203 35.5
PSO017G3993 Papaver somniferum HOM05D006271 ORTHO05D008237 1.8e-07 61.2 212 28.3
QL10p056779 Quercus lobata HOM05D000009 ORTHO05D000008 3.1e-07 60.5 74 55.4
Sp6g37300 Schrenkiella parvula HOM05D006271 ORTHO05D008237 5.3e-07 59.7 106 44.3
PSO170G2099 Papaver somniferum HOM05D006271 ORTHO05D008237 7.0e-07 59.3 208 28.4


User provided reference genes

Program Settings