Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G240100 Prunus persica HOM05D006175 ORTHO05D008081 1.2e-288 995.7 489 100.0
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 6.8e-239 830.5 552 79.9
MD06G1235400 Malus domestica HOM05D006175 ORTHO05D008081 7.6e-182 641.0 552 63.4
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea HOM05D006175 ORTHO05D008081 5.5e-172 608.2 560 59.6
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 1.6e-171 606.7 556 59.0
QL10p033089 Quercus lobata HOM05D006175 ORTHO05D008081 6.1e-171 604.7 559 58.7
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea HOM05D006175 ORTHO05D008081 1.1e-169 600.5 569 58.7
Eucgr.H00594 Eucalyptus grandis HOM05D006175 ORTHO05D008081 5.7e-169 598.2 555 57.5
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 1.3e-168 597.0 553 59.7
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 4.1e-167 592.0 560 58.4
Cfa020669 Carpinus fangiana HOM05D006175 ORTHO05D008081 1.7e-165 586.6 552 58.7
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 2.2e-165 586.3 557 57.8
GSVIVG01008158001 Vitis vinifera HOM05D006175 ORTHO05D008081 4.7e-163 578.6 556 56.7
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 1.0e-162 577.4 555 56.4
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 1.8e-162 576.6 557 57.3
VMungo0464G1920 Vigna mungo HOM05D006175 ORTHO05D008081 1.1e-161 573.9 551 55.7
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 2.6e-161 572.8 550 56.7
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 4.4e-161 572.0 560 55.5
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 7.4e-161 571.2 552 57.2
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 3.7e-160 568.9 552 55.6
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 4.8e-160 568.5 556 56.5
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 6.3e-160 568.2 554 56.1
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 6.3e-160 568.2 554 55.6
Migut.O00238 Erythranthe guttata HOM05D006175 ORTHO05D008081 2.4e-159 566.2 556 55.9
ClCG04G012690 Citrullus lanatus HOM05D006175 ORTHO05D008081 3.1e-159 565.8 552 55.6
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 3.1e-159 565.8 554 55.2
Cc04_g09090 Coffea canephora HOM05D006175 ORTHO05D008081 7.0e-159 564.7 560 55.9
TWI60G0630 Tripterygium wilfordii HOM05D006175 ORTHO05D008081 7.0e-159 564.7 553 55.3
Phvul.004G144700 Phaseolus vulgaris HOM05D006175 ORTHO05D008081 1.6e-158 563.5 556 56.1
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 1.7e-157 560.1 549 55.4
Oeu019145.1 Olea europaea HOM05D006175 ORTHO05D008081 5.0e-157 558.5 558 55.0
Sed0010232 Sechium edule HOM05D006175 ORTHO05D008081 5.0e-157 558.5 551 55.4
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 7.2e-156 554.7 556 54.1
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 9.4e-156 554.3 550 55.6
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 9.4e-156 554.3 583 52.8
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 9.4e-156 554.3 552 55.1
CAN.G637.8 Capsicum annuum HOM05D006175 ORTHO05D008081 2.7e-155 552.7 553 55.0
CSS0011699 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D008081 6.1e-155 551.6 533 56.1
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 8.0e-155 551.2 556 53.6
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 3.0e-154 549.3 556 53.6
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 4.8e-152 542.0 556 53.8
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 1.4e-151 540.4 543 55.6
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 2.4e-151 539.7 578 52.4
DCAR_023267 Daucus carota HOM05D006175 ORTHO05D008081 1.2e-150 537.3 587 51.8
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 3.2e-148 529.3 554 54.0
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 6.1e-147 525.0 560 51.8
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 2.0e-145 520.0 553 53.2
Aa31LG1G13320 Aethionema arabicum HOM05D006175 ORTHO05D008081 2.6e-145 519.6 555 52.4
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 2.6e-145 519.6 553 51.9
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 1.3e-144 517.3 554 52.7
BcaC01g04929 Brassica carinata HOM05D006175 ORTHO05D008081 1.4e-143 513.8 553 51.5
SalBow5G1258 Salvia bowleyana HOM05D006175 ORTHO05D008081 1.4e-143 513.8 570 51.8
SGA_v2.0_scaffold90G27775 Striga asiatica HOM05D006175 ORTHO05D008081 1.4e-143 513.8 554 52.3
BolC3t15542H Brassica oleracea HOM05D006175 ORTHO05D008081 2.4e-143 513.1 553 51.5
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 3.1e-143 512.7 553 51.4
Lsat_1_v5_gn_2_15241 Lactuca sativa HOM05D006175 ORTHO05D008081 4.1e-143 512.3 556 51.1
C03p31990 Brassica napus HOM05D006175 ORTHO05D008081 5.4e-143 511.9 553 51.4
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 1.6e-142 510.4 561 51.7
THA.LOC104810934 Tarenaya hassleriana HOM05D006175 ORTHO05D008081 2.0e-142 510.0 556 51.3
Dinv02367 Davidia involucrata HOM05D006175 ORTHO05D008081 5.9e-142 508.4 538 53.0
BcaB01g03058 Brassica carinata HOM05D006175 ORTHO05D008081 7.7e-142 508.1 553 51.7
ECA238G0751 Erigeron canadensis HOM05D006175 ORTHO05D008081 1.3e-141 507.3 552 52.2
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 3.8e-141 505.8 515 54.2
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 1.1e-140 504.2 508 56.5
BraA03t11882Z Brassica rapa HOM05D006175 ORTHO05D008081 1.9e-140 503.4 555 51.0
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 3.2e-140 502.7 553 50.1
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 5.5e-140 501.9 551 51.2
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 7.2e-140 501.5 553 49.9
SEGI_25528 Sequoiadendron giganteum HOM05D006175 ORTHO05D008081 1.2e-139 500.7 554 50.2
Zm00001eb037700 Zea mays HOM05D006175 ORTHO05D008081 6.1e-139 498.4 554 49.6
Sc10g0008900 Simmondsia chinensis HOM05D006175 ORTHO05D008081 2.3e-138 496.5 554 50.0
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 3.0e-138 496.1 557 49.9
Aqoxy2G03817 Aquilegia oxysepala HOM05D006175 ORTHO05D008081 3.4e-137 492.7 558 50.0
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 4.1e-135 485.7 603 48.4
Hund09784 Selenicereus undatus HOM05D006175 ORTHO05D008081 8.6e-133 478.0 529 50.3
Nitab4.5_0001180g0190 Nicotiana tabacum HOM05D006175 ORTHO05D008081 3.3e-132 476.1 527 52.6
Cpa.g.sc103.12 Carica papaya HOM05D006175 ORTHO05D008081 5.2e-130 468.8 549 49.2
Os05g0160800 Oryza sativa ssp. japonica HOM05D006175 ORTHO05D008081 9.8e-129 464.5 516 50.0
Lj5A165T85 Lonicera japonica HOM05D006175 ORTHO05D008081 4.1e-127 459.1 499 51.7
Haze_18963 Corylus avellana HOM05D006175 ORTHO05D008081 1.0e-117 427.9 506 49.8
MD14G1242400 Malus domestica HOM05D006175 ORTHO05D008081 2.3e-117 426.8 467 54.2
Pp3c16_3220 Physcomitrium patens HOM05D006175 ORTHO05D008081 2.5e-116 423.3 552 42.8
Ah.04g156800 Amaranthus hybridus HOM05D006175 ORTHO05D008081 1.8e-114 417.2 556 44.1
AUR62002056 Chenopodium quinoa HOM05D006175 ORTHO05D008081 9.2e-111 404.8 608 42.8
COL.COLO4_27108 Corchorus olitorius HOM05D006175 ORTHO05D008081 7.8e-110 401.7 535 44.7
vmacro01251 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 1.3e-109 401.0 623 41.6
Mapoly0003s0120 Marchantia polymorpha HOM05D006175 ORTHO05D008081 4.3e-108 396.0 544 40.8
SMO089G0008 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 3.6e-107 392.9 544 41.7
AUR62028170 Chenopodium quinoa HOM05D006175 ORTHO05D008081 8.9e-98 361.7 560 40.7
ATR0598G269 Amborella trichopoda HOM05D006175 ORTHO05D008081 4.4e-97 359.4 563 39.8
Lalb_Chr22g0353691 Lupinus albus HOM05D006175 ORTHO05D008081 8.4e-96 355.1 301 61.1
SMO200G0091 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 1.0e-93 348.2 548 38.1
HPP92_019162 Vanilla planifolia HOM05D006175 ORTHO05D008081 6.6e-93 345.5 550 39.8
HanXRQChr05g0129731 Helianthus annuus HOM05D006175 ORTHO05D008081 2.6e-89 333.6 316 55.7
Rhsim06G0000100 Rhododendron simsii HOM05D006175 ORTHO05D008081 8.1e-83 312.0 300 53.3
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis HOM05D006175 ORTHO05D008081 2.2e-80 303.9 547 35.5
HanXRQChr11g0338981 Helianthus annuus HOM05D006175 ORTHO05D008081 8.4e-80 302.0 301 54.2
Psat6g072600 Pisum sativum HOM05D006175 ORTHO05D008081 2.5e-76 290.4 576 37.0
unitig_0.g1094 Utricularia gibba HOM05D006175 ORTHO05D008081 3.9e-69 266.5 539 36.2
Glyma.09G169100 Glycine max HOM05D006175 ORTHO05D008081 5.3e-66 256.1 273 50.9
FAN18G1603 Fragaria x ananassa HOM05D006175 ORTHO05D008081 7.6e-65 252.3 231 57.6
Lalb_Chr22g0353701 Lupinus albus HOM05D006175 ORTHO05D008081 1.6e-54 218.0 206 57.3
MCO14G014 Micromonas commoda HOM05D006175 ORTHO05D008081 1.5e-52 211.5 648 26.2
FAN08G2730 Fragaria x ananassa HOM05D006175 ORTHO05D008081 9.7e-52 208.8 205 57.1
FAN04G2119 Fragaria x ananassa HOM05D006175 ORTHO05D008081 1.7e-51 208.0 205 57.1
AL4G26880 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 1.8e-50 204.5 373 39.1
FAN13G0892 Fragaria x ananassa HOM05D006175 ORTHO05D008081 5.3e-50 203.0 205 55.6
HanXRQChr05g0129721 Helianthus annuus HOM05D006175 ORTHO05D008081 2.0e-44 184.5 205 50.7
HanXRQChr11g0338971 Helianthus annuus HOM05D006175 ORTHO05D008081 2.2e-43 181.0 205 48.8
Cre10.g424200 Chlamydomonas reinhardtii HOM05D006175 ORTHO05D008081 4.4e-36 156.8 505 27.1
AUR62043421 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.7e-32 144.8 173 46.2
PRCOL_00003367 Prasinoderma coloniale HOM05D006175 ORTHO05D008081 1.4e-29 135.2 599 24.7
VMungo1215G0683 Vigna mungo HOM05D006175 ORTHO05D008081 5.2e-29 133.3 177 44.1
Ca_23674_v3 Cicer arietinum L. HOM05D006175 ORTHO05D008081 4.1e-26 123.6 203 39.4
CDE04G1443 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 7.2e-23 112.8 104 56.7
Thecc.10G092900 Theobroma cacao HOM05D006175 ORTHO05D008952 9.2e-18 95.9 122 45.1
CDE04G2185 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.7e-16 91.7 85 55.3
Thecc.04G242900 Theobroma cacao HOM05D006175 ORTHO05D008081 2.0e-12 78.2 48 75.0
CSS0024377 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D043346 4.1e-10 70.5 46 71.7
CDE04G3312 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.2e-09 68.9 78 42.3


User provided reference genes

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