Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G200400 Prunus persica HOM05D001674 ORTHO05D008599 0.0e+00 3058.1 1688 100.0
RcHm_v2.0_Chr7g0182421 Rosa chinensis HOM05D001674 ORTHO05D008599 0.0e+00 2240.7 1695 76.9
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 2199.5 1695 75.6
FvH4_5g14340 Fragaria vesca HOM05D001674 ORTHO05D008599 0.0e+00 2195.2 1695 75.6
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 2190.6 1695 75.6
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 2190.2 1695 75.5
QL10p018629 Quercus lobata HOM05D001674 ORTHO05D008599 0.0e+00 2046.2 1721 70.5
Atru.chr9.280 Acer truncatum HOM05D001674 ORTHO05D008599 0.0e+00 1820.1 1720 64.9
Thecc.03G096700 Theobroma cacao HOM05D001674 ORTHO05D008599 0.0e+00 1819.7 1717 64.2
Duzib068G0733 Durio zibethinus HOM05D001674 ORTHO05D008599 0.0e+00 1816.6 1718 64.8
Ciclev10018469m.g Citrus clementina HOM05D001674 ORTHO05D008599 0.0e+00 1799.3 1721 64.4
TAR629G0913 Trochodendron aralioides HOM05D001674 ORTHO05D008599 0.0e+00 1793.5 1749 62.0
CANSAT80G0851 Cannabis sativa HOM05D001674 ORTHO05D008599 0.0e+00 1777.3 1730 63.3
Haze_07676 Corylus avellana HOM05D001674 ORTHO05D008599 0.0e+00 1764.2 1508 70.0
MD14G1208500 Malus domestica HOM05D001674 ORTHO05D008599 0.0e+00 1759.2 1227 82.9
Gorai.007G039000 Gossypium raimondii HOM05D001674 ORTHO05D008599 0.0e+00 1734.5 1722 62.3
COL.COLO4_36885 Corchorus olitorius HOM05D001674 ORTHO05D008599 0.0e+00 1722.2 1719 61.6
Gohir.A11G032900 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1701.4 1722 61.8
GSVIVG01007917001 Vitis vinifera HOM05D001674 ORTHO05D008599 0.0e+00 1699.9 1664 60.5
Glyma.17G076400 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1666.4 1712 60.9
VMungo1215G3312 Vigna mungo HOM05D001674 ORTHO05D008599 0.0e+00 1655.2 1711 60.4
Lj4g0011824 Lotus japonicus HOM05D001674 ORTHO05D008599 0.0e+00 1651.0 1727 60.0
TWI15G1152 Tripterygium wilfordii HOM05D001674 ORTHO05D008599 0.0e+00 1650.6 1718 60.9
Glyma.05G023300 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1649.0 1710 60.6
Phvul.003G186700 Phaseolus vulgaris HOM05D001674 ORTHO05D008599 0.0e+00 1643.2 1709 60.6
Manes.06G087600 Manihot esculenta HOM05D001674 ORTHO05D008599 0.0e+00 1622.8 1825 57.7
Lalb_Chr13g0302981 Lupinus albus HOM05D001674 ORTHO05D008599 0.0e+00 1614.7 1717 58.6
TPR.G2046 Trifolium pratense HOM05D001674 ORTHO05D008599 0.0e+00 1605.1 1711 59.3
Medtr4g109230 Medicago truncatula HOM05D001674 ORTHO05D008599 0.0e+00 1590.9 1703 59.0
vmacro17586 Vaccinium macrocarpon HOM05D001674 ORTHO05D008599 0.0e+00 1589.3 1715 57.1
arahy.Tifrunner.gnm1.ann1.MMN4BF Arachis hypogaea HOM05D001674 ORTHO05D008599 0.0e+00 1581.2 1717 58.0
Sed0027646 Sechium edule HOM05D001674 ORTHO05D008599 0.0e+00 1575.5 1729 58.4
Sabra12G0048200 Salix brachista HOM05D001674 ORTHO05D008599 0.0e+00 1574.3 1920 53.6
Nn4g23353 Nelumbo nucifera HOM05D001674 ORTHO05D008599 0.0e+00 1568.5 1752 56.0
PGR083G0537 Punica granatum HOM05D001674 ORTHO05D008599 0.0e+00 1566.2 1725 56.1
Psat4g048680 Pisum sativum HOM05D001674 ORTHO05D008599 0.0e+00 1565.8 1711 58.1
MELO3C017205.2 Cucumis melo HOM05D001674 ORTHO05D008599 0.0e+00 1562.7 1726 58.2
Ca_21793_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008599 0.0e+00 1562.0 1687 58.3
CsaV3_1G002700 Cucumis sativus L. HOM05D001674 ORTHO05D008599 0.0e+00 1552.7 1727 57.6
Hma1.2p1_0060F.1_g033350 Hydrangea macrophylla HOM05D001674 ORTHO05D008599 0.0e+00 1543.9 1697 58.5
ClCG06G015860 Citrullus lanatus HOM05D001674 ORTHO05D008599 0.0e+00 1531.5 1724 57.3
Potri.012G066900 Populus trichocarpa HOM05D001674 ORTHO05D008599 0.0e+00 1481.8 1612 58.8
Actinidia04849 Actinidia chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1464.5 1435 62.9
Aqoxy3G00452 Aquilegia oxysepala HOM05D001674 ORTHO05D008599 0.0e+00 1455.7 1733 54.1
Cc00_g02250 Coffea canephora HOM05D001674 ORTHO05D008599 0.0e+00 1447.6 1783 52.2
Eucgr.B00566 Eucalyptus grandis HOM05D001674 ORTHO05D008599 0.0e+00 1428.7 1507 60.1
Oeu032213.1 Olea europaea HOM05D001674 ORTHO05D008599 0.0e+00 1396.3 1763 52.8
PSO017G4474 Papaver somniferum HOM05D001674 ORTHO05D008599 0.0e+00 1384.8 1813 53.9
CiPaw.11G049600 Carya illinoinensis HOM05D001674 ORTHO05D008599 0.0e+00 1384.4 1309 67.2
PSO478G4640 Papaver somniferum HOM05D001674 ORTHO05D008599 0.0e+00 1378.2 1822 51.9
DCAR_031671 Daucus carota HOM05D001674 ORTHO05D008599 0.0e+00 1370.5 1722 52.3
Nitab4.5_0004511g0020 Nicotiana tabacum HOM05D001674 ORTHO05D008599 0.0e+00 1365.9 1710 53.9
Gohir.D11G036200 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1354.7 1204 67.6
CAN.G479.33 Capsicum annuum HOM05D001674 ORTHO05D008599 0.0e+00 1354.0 1721 53.1
Rhsim08G0149500 Rhododendron simsii HOM05D001674 ORTHO05D008599 0.0e+00 1350.9 1497 55.9
Hund02613 Selenicereus undatus HOM05D001674 ORTHO05D008599 0.0e+00 1339.7 1735 51.7
AUR62021608 Chenopodium quinoa HOM05D001674 ORTHO05D008599 0.0e+00 1330.5 1732 51.3
Migut.D01672 Erythranthe guttata HOM05D001674 ORTHO05D008599 0.0e+00 1330.1 1711 49.5
Sopen03g034510 Solanum pennellii HOM05D001674 ORTHO05D008599 0.0e+00 1328.5 1719 52.7
AUR62008489 Chenopodium quinoa HOM05D001674 ORTHO05D008599 0.0e+00 1326.2 1783 51.5
MSTRG.9602 Avicennia marina HOM05D001674 ORTHO05D008599 0.0e+00 1312.4 1719 51.9
HanXRQChr04g0107361 Helianthus annuus HOM05D001674 ORTHO05D008599 0.0e+00 1279.6 1703 49.0
SalBow7G3498 Salvia bowleyana HOM05D001674 ORTHO05D008599 0.0e+00 1279.6 1739 49.6
Cpa.g.sc94.3 Carica papaya HOM05D001674 ORTHO05D008599 0.0e+00 1264.6 1252 63.1
ECA247G0462 Erigeron canadensis HOM05D001674 ORTHO05D008599 0.0e+00 1239.9 1706 48.9
Lsat_1_v5_gn_1_13760 Lactuca sativa HOM05D001674 ORTHO05D008599 0.0e+00 1220.3 1705 48.8
ATR0064G082 Amborella trichopoda HOM05D001674 ORTHO05D008599 0.0e+00 1208.0 1387 56.4
SGA_v2.0_scaffold3G01735 Striga asiatica HOM05D001674 ORTHO05D008599 0.0e+00 1194.5 1733 47.0
Dinv10682 Davidia involucrata HOM05D001674 ORTHO05D008599 0.0e+00 1189.9 954 69.9
Peaxi162Scf00201g00021 Petunia axillaris HOM05D001674 ORTHO05D008599 0.0e+00 1155.2 1252 59.5
PGSC0003DMG400024553 Solanum tuberosum HOM05D001674 ORTHO05D008599 0.0e+00 1139.4 1496 53.0
Sc12g0006570 Simmondsia chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1134.4 1344 56.8
Lj5A106T70 Lonicera japonica HOM05D001674 ORTHO05D008599 0.0e+00 1105.9 1235 57.2
Solyc03g115510.3 Solanum lycopersicum HOM05D001674 ORTHO05D008599 0.0e+00 1102.0 1252 57.8
Actinidia09243 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.0e-302 1044.3 947 64.7
Dinv38777 Davidia involucrata HOM05D001674 ORTHO05D008599 1.5e-290 1003.8 824 68.4
SEGI_10628 Sequoiadendron giganteum HOM05D001674 ORTHO05D008599 2.2e-289 1000.0 1744 42.7
Zm00001eb108430 Zea mays HOM05D001674 ORTHO05D008599 6.7e-286 988.4 1511 46.8
Nitab4.5_0020510g0010 Nicotiana tabacum HOM05D001674 ORTHO05D008599 4.4e-269 932.6 1039 60.3
Ah.02g113890 Amaranthus hybridus HOM05D001674 ORTHO05D008599 1.4e-262 911.0 1476 46.4
unitig_37.g12722 Utricularia gibba HOM05D001674 ORTHO05D008599 1.7e-233 814.3 1118 48.5
Pp3c11_9170 Physcomitrium patens HOM05D001674 ORTHO05D008599 1.2e-229 801.6 1709 39.0
SMO117G0045 Selaginella moellendorffii HOM05D001674 ORTHO05D008599 7.1e-227 792.3 1243 47.4
Dinv10683 Davidia involucrata HOM05D001674 ORTHO05D008599 4.6e-186 656.8 738 53.9
Os06g0235300 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D008599 4.4e-168 597.0 1068 44.9
AagrBONN_evm.TU.Sc2ySwM_228.3354 Anthoceros agrestis HOM05D001674 ORTHO05D008599 2.2e-164 584.7 870 44.1
Actinidia09244 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.2e-152 545.8 731 48.2
CDE07G0117 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 4.1e-142 510.8 553 57.1
CDE07G0766 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 4.7e-130 470.7 864 41.3
Pp3c1_9760 Physcomitrium patens HOM05D001674 ORTHO05D008599 1.2e-117 429.5 1161 32.4
Dinv38778 Davidia involucrata HOM05D001674 ORTHO05D008599 3.1e-113 414.8 735 42.7
MD14G1208300 Malus domestica HOM05D001674 ORTHO05D008599 7.9e-101 373.6 221 85.1
Actinidia09199 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.4e-89 336.3 719 37.8
Lj5A106T69 Lonicera japonica HOM05D001674 ORTHO05D008599 2.0e-88 332.4 496 44.2
Ah.02g113880 Amaranthus hybridus HOM05D001674 ORTHO05D008599 9.7e-75 287.0 257 58.0
Rhsim08G0149700 Rhododendron simsii HOM05D001674 ORTHO05D008599 1.7e-58 233.0 206 63.1
Nitab4.5_0002881g0120 Nicotiana tabacum HOM05D001674 ORTHO05D008599 4.7e-53 214.9 225 54.2
Cpa.g.sc94.4 Carica papaya HOM05D001674 ORTHO05D008599 1.6e-45 189.9 143 69.9
unitig_37.g12721 Utricularia gibba HOM05D001674 ORTHO05D008599 2.4e-41 176.0 186 54.3
Actinidia09209 Actinidia chinensis HOM05D001674 ORTHO05D008599 4.5e-40 171.8 165 59.4
CDE07G0655 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 8.0e-37 161.0 169 50.9
Actinidia09203 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.8e-36 159.8 130 70.8
PRCOL_00000483 Prasinoderma coloniale HOM05D001674 ORTHO05D008599 8.6e-31 141.0 1337 22.4
CBR_g23198 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-30 139.8 283 35.3
Actinidia09211 Actinidia chinensis HOM05D001674 ORTHO05D008599 3.4e-27 129.0 298 35.9
MCO15G104 Micromonas commoda HOM05D001674 ORTHO05D008599 2.2e-26 126.3 243 34.6
TAR376G0971 Trochodendron aralioides HOM05D001674 ORTHO05D008599 4.6e-24 118.6 114 57.0
CBR_g23193 Chara braunii HOM05D000019 ORTHO05D000048 5.0e-23 115.2 98 63.3
Cre16.g679400 Chlamydomonas reinhardtii HOM05D001674 ORTHO05D008599 5.6e-22 111.7 284 28.2
PGSC0003DMG400006818 Solanum tuberosum HOM05D001674 ORTHO05D008599 5.2e-20 105.1 152 43.4
Actinidia09202 Actinidia chinensis HOM05D001674 ORTHO05D008599 3.4e-19 102.4 205 40.0
Psat3g111480 Pisum sativum HOM05D001026 ORTHO05D008599 2.0e-16 93.2 59 76.3
CBR_g23210 Chara braunii HOM05D000019 ORTHO05D000002 3.0e-15 89.4 64 59.4
CBR_g23187 Chara braunii HOM05D001674 ORTHO05D000353 1.2e-13 84.0 71 60.6
Nn1g01396 Nelumbo nucifera HOM05D001674 ORTHO05D008599 1.1e-06 60.8 53 66.0
Migut.C00071 Erythranthe guttata HOM05D001674 ORTHO05D008599 9.5e-06 57.8 71 53.5


User provided reference genes

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