Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G142300 Prunus persica HOM05D007048 ORTHO05D008811 6.1e-62 240.7 129 100.0
MD06G1131300 Malus domestica HOM05D007048 ORTHO05D008811 1.7e-56 222.6 129 90.7
RcHm_v2.0_Chr7g0188741 Rosa chinensis HOM05D007048 ORTHO05D008811 9.1e-50 200.3 127 80.3
Haze_07101 Corylus avellana HOM05D007048 ORTHO05D008811 2.0e-49 199.1 130 80.8
Cfa018710 Carpinus fangiana HOM05D007048 ORTHO05D008811 3.5e-49 198.4 123 82.9
Manes.14G045100 Manihot esculenta HOM05D007048 ORTHO05D008811 4.5e-49 198.0 126 81.0
Dinv23221 Davidia involucrata HOM05D007048 ORTHO05D008811 5.9e-49 197.6 127 78.0
Actinidia18303 Actinidia chinensis HOM05D007048 ORTHO05D008811 3.8e-48 194.9 127 76.4
FAN18G3224 Fragaria x ananassa HOM05D007048 ORTHO05D008811 1.9e-47 192.6 129 78.3
Thecc.03G140000 Theobroma cacao HOM05D007048 ORTHO05D008811 7.2e-47 190.7 128 78.1
Sabra15G0126100 Salix brachista HOM05D007048 ORTHO05D008811 1.6e-46 189.5 129 74.4
CiPaw.11G000300 Carya illinoinensis HOM05D007048 ORTHO05D008811 2.7e-46 188.7 129 79.1
GSVIVG01008645001 Vitis vinifera HOM05D007048 ORTHO05D008811 4.7e-46 188.0 128 75.8
SalBow1G8421 Salvia bowleyana HOM05D007048 ORTHO05D008811 8.0e-46 187.2 128 75.8
Migut.D01184 Erythranthe guttata HOM05D007048 ORTHO05D008811 1.8e-45 186.0 127 73.2
Hma1.2p1_0664F.1_g199000 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 1.8e-45 186.0 123 74.8
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 2.3e-45 185.7 122 77.9
Cpa.g.sc13.165 Carica papaya HOM05D007048 ORTHO05D008811 3.0e-45 185.3 124 76.6
TAR475G0007 Trochodendron aralioides HOM05D007048 ORTHO05D008811 4.0e-45 184.9 123 77.2
TAR629G1913 Trochodendron aralioides HOM05D007048 ORTHO05D008811 4.0e-45 184.9 123 77.2
Ciclev10033023m.g Citrus clementina HOM05D007048 ORTHO05D008811 2.6e-44 182.2 126 74.6
Peaxi162Scf01168g00014 Petunia axillaris HOM05D007048 ORTHO05D008811 2.6e-44 182.2 129 72.9
FAN04G3007 Fragaria x ananassa HOM05D007048 ORTHO05D008811 3.3e-44 181.8 123 78.0
Potri.015G105900 Populus trichocarpa HOM05D007048 ORTHO05D008811 5.7e-44 181.0 123 75.6
Duzib068G0404 Durio zibethinus HOM05D007048 ORTHO05D008811 9.7e-44 180.3 126 75.4
TWI14G0368 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 1.3e-43 179.9 127 73.2
TWI39G0039 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 1.7e-43 179.5 130 73.8
CAN.G521.6 Capsicum annuum HOM05D007048 ORTHO05D008811 3.7e-43 178.3 129 71.3
Cc04_g05890 Coffea canephora HOM05D007048 ORTHO05D008811 3.7e-43 178.3 129 69.0
MELO3C035737.2 Cucumis melo HOM05D007048 ORTHO05D008811 3.7e-43 178.3 126 75.4
QL10p000556 Quercus lobata HOM05D007048 ORTHO05D008811 3.7e-43 178.3 121 76.9
Rhsim08G0196900 Rhododendron simsii HOM05D007048 ORTHO05D008811 4.8e-43 177.9 117 77.8
CANSAT56G3230 Cannabis sativa HOM05D007048 ORTHO05D008811 8.2e-43 177.2 129 72.1
Atru.chr6.1912 Acer truncatum HOM05D007048 ORTHO05D008811 1.8e-42 176.0 124 70.2
CsaV3_1G009910 Cucumis sativus L. HOM05D007048 ORTHO05D008811 2.4e-42 175.6 126 73.8
CANSAT56G3502 Cannabis sativa HOM05D007048 ORTHO05D008811 3.1e-42 175.3 129 71.3
Gohir.D07G051200 Gossypium hirsutum HOM05D007048 ORTHO05D008811 9.1e-42 173.7 126 71.4
Gorai.001G054300 Gossypium raimondii HOM05D007048 ORTHO05D008811 9.1e-42 173.7 126 71.4
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 9.1e-42 173.7 129 69.0
ClCG03G004020 Citrullus lanatus HOM05D007048 ORTHO05D008811 1.6e-41 172.9 135 71.9
Nitab4.5_0002584g0070 Nicotiana tabacum HOM05D007048 ORTHO05D008811 1.6e-41 172.9 134 67.9
Gohir.A07G046900 Gossypium hirsutum HOM05D007048 ORTHO05D008811 2.0e-41 172.6 126 70.6
Nitab4.5_0003119g0030 Nicotiana tabacum HOM05D007048 ORTHO05D008811 2.0e-41 172.6 134 67.2
vmacro19180 Vaccinium macrocarpon HOM05D007048 ORTHO05D008811 3.5e-41 171.8 123 74.0
Solyc07g054400.3 Solanum lycopersicum HOM05D007048 ORTHO05D008811 4.5e-41 171.4 129 69.0
MD14G1147700 Malus domestica HOM05D007048 ORTHO05D008811 7.7e-41 170.6 96 91.7
PGSC0003DMG400018389 Solanum tuberosum HOM05D007048 ORTHO05D008811 1.0e-40 170.2 129 67.4
Sc22g0003410 Simmondsia chinensis HOM05D007048 ORTHO05D008811 2.2e-40 169.1 118 72.9
Aqoxy3G01543 Aquilegia oxysepala HOM05D007048 ORTHO05D008811 6.5e-40 167.5 116 71.6
PSO339G2722 Papaver somniferum HOM05D007048 ORTHO05D008811 8.5e-40 167.2 122 68.9
Sed0017197 Sechium edule HOM05D007048 ORTHO05D008811 1.9e-39 166.0 126 72.2
PSO384G0987 Papaver somniferum HOM05D007048 ORTHO05D008811 2.5e-39 165.6 125 68.8
SGA_v2.0_scaffold40G15679 Striga asiatica HOM05D007048 ORTHO05D008811 4.2e-39 164.9 148 60.1
AL8G25120 Arabidopsis lyrata HOM05D007048 ORTHO05D008811 9.4e-39 163.7 118 71.2
arahy.Tifrunner.gnm1.ann1.QNIR3T Arachis hypogaea HOM05D007048 ORTHO05D008811 3.6e-38 161.8 118 70.3
Carub.0008s1094 Capsella rubella HOM05D007048 ORTHO05D008811 3.6e-38 161.8 125 69.6
Hund10045 Selenicereus undatus HOM05D007048 ORTHO05D008811 3.6e-38 161.8 126 64.3
AT5G50930 Arabidopsis thaliana HOM05D007048 ORTHO05D008811 4.7e-38 161.4 118 71.2
A03p16450 Brassica napus HOM05D007048 ORTHO05D008811 6.1e-38 161.0 118 69.5
BraA03t10934Z Brassica rapa HOM05D007048 ORTHO05D008811 6.1e-38 161.0 118 69.5
MBI07_g41901_MAGBIO Magnolia biondii HOM05D007048 ORTHO05D008811 6.1e-38 161.0 124 66.1
Sp6g13100 Schrenkiella parvula HOM05D007048 ORTHO05D008811 6.1e-38 161.0 125 67.2
BcaNung07188 Brassica carinata HOM05D007048 ORTHO05D008811 8.0e-38 160.6 118 69.5
C03p19340 Brassica napus HOM05D007048 ORTHO05D008811 8.0e-38 160.6 118 69.5
BolC3t14320H Brassica oleracea HOM05D007048 ORTHO05D008811 8.0e-38 160.6 118 69.5
CARHR257290 Cardamine hirsuta HOM05D007048 ORTHO05D008811 1.4e-37 159.8 126 67.5
EL10Ac5g11295 Beta vulgaris HOM05D007048 ORTHO05D008811 1.8e-37 159.5 120 67.5
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 3.0e-37 158.7 122 67.2
HanXRQChr10g0316061 Helianthus annuus HOM05D007048 ORTHO05D008811 5.2e-37 157.9 124 66.1
Lalb_Chr08g0237541 Lupinus albus HOM05D007048 ORTHO05D008811 6.8e-37 157.5 127 66.1
Thhalv10014960m.g Eutrema salsugineum HOM05D007048 ORTHO05D008811 1.5e-36 156.4 125 65.6
Glyma.04G201000 Glycine max HOM05D007048 ORTHO05D008811 4.4e-36 154.8 115 67.0
PGR031G3844 Punica granatum HOM05D007048 ORTHO05D008811 4.4e-36 154.8 125 64.8
arahy.Tifrunner.gnm1.ann1.8FCI62 Arachis hypogaea HOM05D007048 ORTHO05D008811 5.7e-36 154.5 113 70.8
PGR031G3072 Punica granatum HOM05D007048 ORTHO05D008811 5.7e-36 154.5 125 64.0
Phvul.009G161500 Phaseolus vulgaris HOM05D007048 ORTHO05D008811 1.3e-35 153.3 113 68.1
Lsat_1_v5_gn_5_10141 Lactuca sativa HOM05D007048 ORTHO05D008811 1.7e-35 152.9 131 62.6
Ah.02g114610 Amaranthus hybridus HOM05D007048 ORTHO05D008811 2.8e-35 152.1 124 62.1
VMungo1309G1627 Vigna mungo HOM05D007048 ORTHO05D008811 2.8e-35 152.1 113 68.1
PGR031G2395 Punica granatum HOM05D007048 ORTHO05D008811 3.7e-35 151.8 125 63.2
Aa31LG3G7430 Aethionema arabicum HOM05D007048 ORTHO05D008811 8.3e-35 150.6 121 63.6
Medtr3g098660 Medicago truncatula HOM05D007048 ORTHO05D008811 2.4e-34 149.1 115 66.1
arahy.Tifrunner.gnm1.ann1.CS080T Arachis hypogaea HOM05D007048 ORTHO05D008811 7.0e-34 147.5 116 68.1
FvH4_5g09450 Fragaria vesca HOM05D007048 ORTHO05D008811 7.0e-34 147.5 96 78.1
Glyma.06G164400 Glycine max HOM05D007048 ORTHO05D008811 7.0e-34 147.5 115 65.2
Lj1g0016164 Lotus japonicus HOM05D007048 ORTHO05D008811 9.1e-34 147.1 115 65.2
Psat5g055240 Pisum sativum HOM05D007048 ORTHO05D008811 1.6e-33 146.4 109 67.9
CSS0012628 Camellia sinensis var. sinensis HOM05D007048 ORTHO05D008811 5.9e-33 144.4 127 63.8
TPR.G21584 Trifolium pratense HOM05D007048 ORTHO05D008811 1.0e-32 143.7 115 65.2
arahy.Tifrunner.gnm1.ann1.DD5QTF Arachis hypogaea HOM05D007048 ORTHO05D008811 1.3e-32 143.3 116 65.5
Eucgr.K02194 Eucalyptus grandis HOM05D007048 ORTHO05D008811 2.3e-32 142.5 145 56.6
unitig_747.g21321 Utricularia gibba HOM05D007048 ORTHO05D008811 2.9e-32 142.1 155 51.6
Os04g0397700 Oryza sativa ssp. japonica HOM05D007048 ORTHO05D008811 7.2e-31 137.5 120 59.2
Hma1.2p1_0664F.1_g198980 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 6.8e-29 131.0 85 75.3
Hma1.2p1_0664F.1_g198990 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 8.8e-29 130.6 84 76.2
PGR044G0448 Punica granatum HOM05D007048 ORTHO05D008811 1.2e-28 130.2 121 60.3
Nn3g16280 Nelumbo nucifera HOM05D007048 ORTHO05D008811 1.4e-26 123.2 77 80.5
HPP92_008245 Vanilla planifolia HOM05D007048 ORTHO05D008811 3.1e-26 122.1 124 56.5
AUR62009534 Chenopodium quinoa HOM05D007048 ORTHO05D008811 4.1e-26 121.7 94 64.9
AUR62041697 Chenopodium quinoa HOM05D007048 ORTHO05D008811 2.7e-25 119.0 90 66.7
AUR62044083 Chenopodium quinoa HOM05D007048 ORTHO05D008811 2.7e-25 119.0 90 66.7
FAN13G1437 Fragaria x ananassa HOM05D007048 ORTHO05D008811 3.5e-25 118.6 78 76.9
SEGI_10153 Sequoiadendron giganteum HOM05D007048 ORTHO05D008811 1.3e-24 116.7 108 56.5
ATR0582G167 Amborella trichopoda HOM05D007048 ORTHO05D008811 8.6e-24 114.0 111 55.9
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 8.6e-24 114.0 76 75.0
Nn1g04900 Nelumbo nucifera HOM05D007048 ORTHO05D008811 1.1e-23 113.6 84 69.0
BcaB01g01606 Brassica carinata HOM05D007048 ORTHO05D008811 3.6e-22 108.6 91 63.7
AagrBONN_evm.TU.Sc2ySwM_362.2725 Anthoceros agrestis HOM05D007048 ORTHO05D008811 2.9e-19 99.0 109 46.8
Zm00001eb084850 Zea mays HOM05D007048 ORTHO05D008811 2.7e-17 92.4 67 67.2
BcaB05g23641 Brassica carinata HOM05D007048 ORTHO05D008811 7.8e-17 90.9 77 63.6
Pp3c2_1780 Physcomitrium patens HOM05D007048 ORTHO05D008811 1.1e-15 87.0 100 49.0
Mapoly0109s0028 Marchantia polymorpha HOM05D007048 ORTHO05D008811 6.8e-13 77.8 117 39.3
RcHm_v2.0_Chr5g0067941 Rosa chinensis HOM05D052544 ORTHO05D008811 2.9e-11 72.4 56 69.6
COL.COLO4_37252 Corchorus olitorius HOM05D007048 ORTHO05D008811 9.2e-10 67.4 78 51.3
Oeu009260.1 Olea europaea HOM05D007048 ORTHO05D008811 3.0e-08 62.4 39 74.4
ECA233G3375 Erigeron canadensis HOM05D007048 ORTHO05D008811 5.0e-08 61.6 88 38.6


User provided reference genes

Program Settings