Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G075900 Prunus persica HOM05D007062 ORTHO05D008941 2.9e-117 425.6 281 100.0
RcHm_v2.0_Chr7g0202221 Rosa chinensis HOM05D007062 ORTHO05D008941 1.3e-88 330.5 282 84.8
MD06G1065500 Malus domestica HOM05D007062 ORTHO05D008941 4.1e-87 325.5 283 84.1
FvH4_5g00330 Fragaria vesca HOM05D007062 ORTHO05D008941 4.5e-86 322.0 282 83.3
FAN08G1089 Fragaria x ananassa HOM05D007062 ORTHO05D008941 2.1e-83 313.2 295 79.7
FAN18G0001 Fragaria x ananassa HOM05D007062 ORTHO05D008941 2.1e-83 313.2 295 79.7
Manes.01G076100 Manihot esculenta HOM05D007062 ORTHO05D008941 1.1e-79 300.8 282 77.0
Potri.003G112900 Populus trichocarpa HOM05D007062 ORTHO05D008941 2.9e-77 292.7 283 77.7
CiPaw.12G106400 Carya illinoinensis HOM05D007062 ORTHO05D008941 3.6e-75 285.8 281 76.5
Atru.chr9.1388 Acer truncatum HOM05D007062 ORTHO05D008941 1.3e-72 277.3 282 75.9
Thecc.03G257500 Theobroma cacao HOM05D007062 ORTHO05D008941 6.3e-72 275.0 290 72.1
TAR375G0275 Trochodendron aralioides HOM05D007062 ORTHO05D008941 8.3e-72 274.6 281 76.9
QL12p014002 Quercus lobata HOM05D007062 ORTHO05D008941 2.4e-71 273.1 317 56.5
ClCG01G003790 Citrullus lanatus HOM05D007062 ORTHO05D008941 3.5e-70 269.2 279 73.8
Duzib205G0297 Durio zibethinus HOM05D007062 ORTHO05D008941 1.0e-69 267.7 284 73.2
Sed0027513 Sechium edule HOM05D007062 ORTHO05D008941 2.9e-69 266.2 279 73.5
MELO3C005562.2 Cucumis melo HOM05D007062 ORTHO05D008941 3.8e-69 265.8 281 71.9
CsaV3_5G003940 Cucumis sativus L. HOM05D007062 ORTHO05D008941 3.8e-69 265.8 279 71.7
Phvul.002G061100 Phaseolus vulgaris HOM05D007062 ORTHO05D008941 3.8e-69 265.8 284 72.9
CSS0025302 Camellia sinensis var. sinensis HOM05D007062 ORTHO05D008941 8.6e-69 264.6 292 71.6
CSS0040813 Camellia sinensis var. sinensis HOM05D007062 ORTHO05D008941 1.5e-68 263.8 292 71.2
Cpa.g.sc29.119 Carica papaya HOM05D007062 ORTHO05D008941 7.2e-68 261.5 282 73.4
THA.LOC104818475 Tarenaya hassleriana HOM05D007062 ORTHO05D008941 7.2e-68 261.5 286 72.0
Ciclev10021545m.g Citrus clementina HOM05D007062 ORTHO05D008941 9.5e-68 261.2 285 73.7
PGR031G1282 Punica granatum HOM05D007062 ORTHO05D008941 9.5e-68 261.2 277 67.9
GSVIVG01001267001 Vitis vinifera HOM05D007062 ORTHO05D008941 9.5e-68 261.2 281 74.0
MSTRG.25539 Avicennia marina HOM05D007062 ORTHO05D008941 2.1e-67 260.0 280 66.4
Gohir.D08G190800 Gossypium hirsutum HOM05D007062 ORTHO05D008941 2.8e-67 259.6 285 70.2
Gorai.004G200900 Gossypium raimondii HOM05D007062 ORTHO05D008941 8.0e-67 258.1 285 66.3
Glyma.11G030700 Glycine max HOM05D007062 ORTHO05D008941 4.0e-66 255.8 282 72.7
Lsat_1_v5_gn_6_2361 Lactuca sativa HOM05D007062 ORTHO05D008941 2.0e-65 253.4 282 74.1
VMungo1215G0274 Vigna mungo HOM05D007062 ORTHO05D008941 2.0e-65 253.4 288 70.5
CAN.G1217.21 Capsicum annuum HOM05D007062 ORTHO05D008941 4.4e-65 252.3 281 69.4
Sabra03G0078200 Salix brachista HOM05D007062 ORTHO05D008941 5.7e-65 251.9 366 52.5
Nitab4.5_0000993g0090 Nicotiana tabacum HOM05D007062 ORTHO05D008941 7.5e-65 251.5 283 71.0
FAN04G1528 Fragaria x ananassa HOM05D007062 ORTHO05D008941 1.3e-64 250.8 270 65.9
Sc06g0007370 Simmondsia chinensis HOM05D007062 ORTHO05D008941 2.2e-64 250.0 281 71.2
CANSAT21G0465 Cannabis sativa HOM05D007062 ORTHO05D008941 2.8e-64 249.6 286 72.7
SalBow6G7097 Salvia bowleyana HOM05D007062 ORTHO05D008941 2.8e-64 249.6 282 71.6
TWI60G0310 Tripterygium wilfordii HOM05D007062 ORTHO05D008941 3.7e-64 249.2 282 71.6
Solyc08g079110.4 Solanum lycopersicum HOM05D007062 ORTHO05D008941 8.3e-64 248.1 281 70.8
Sopen08g027570 Solanum pennellii HOM05D007062 ORTHO05D008941 1.1e-63 247.7 281 70.8
Peaxi162Scf00002g00075 Petunia axillaris HOM05D007062 ORTHO05D008941 1.8e-63 246.9 281 69.0
Nitab4.5_0005649g0010 Nicotiana tabacum HOM05D007062 ORTHO05D008941 3.1e-63 246.1 283 70.3
PGSC0003DMG400004788 Solanum tuberosum HOM05D007062 ORTHO05D008941 4.1e-63 245.7 281 68.7
TPR.G25898 Trifolium pratense HOM05D007062 ORTHO05D008941 4.1e-63 245.7 281 71.5
arahy.Tifrunner.gnm1.ann1.06MV4V Arachis hypogaea HOM05D007062 ORTHO05D008941 1.2e-62 244.2 226 81.9
arahy.Tifrunner.gnm1.ann1.FU46H2 Arachis hypogaea HOM05D007062 ORTHO05D008941 1.2e-62 244.2 226 81.9
Actinidia02105 Actinidia chinensis HOM05D007062 ORTHO05D008941 4.5e-62 242.3 282 71.3
Cc08_g12960 Coffea canephora HOM05D007062 ORTHO05D008941 7.8e-62 241.5 282 70.2
ECA232G1654 Erigeron canadensis HOM05D007062 ORTHO05D008941 7.8e-62 241.5 279 68.8
Migut.A00806 Erythranthe guttata HOM05D007062 ORTHO05D008941 2.3e-61 240.0 282 67.0
Lj2g0026876 Lotus japonicus HOM05D007062 ORTHO05D008941 2.3e-61 240.0 284 71.1
Os02g0643500 Oryza sativa ssp. japonica HOM05D007062 ORTHO05D008941 2.3e-61 240.0 215 77.2
Zm00001eb248670 Zea mays HOM05D007062 ORTHO05D008941 2.3e-61 240.0 267 73.4
Aqoxy5G03933 Aquilegia oxysepala HOM05D007062 ORTHO05D008941 3.8e-61 239.2 286 71.0
BcaC07g42568 Brassica carinata HOM05D007062 ORTHO05D008941 8.6e-61 238.0 283 70.3
Lalb_Chr16g0379721 Lupinus albus HOM05D007062 ORTHO05D008941 1.1e-60 237.7 219 82.2
Aa31LG1G2430 Aethionema arabicum HOM05D007062 ORTHO05D008941 1.9e-60 236.9 300 59.0
Thhalv10008422m.g Eutrema salsugineum HOM05D007062 ORTHO05D008941 2.5e-60 236.5 291 68.7
PSO063G0503 Papaver somniferum HOM05D007062 ORTHO05D008941 2.5e-60 236.5 289 69.9
Carub.0001s1193 Capsella rubella HOM05D007062 ORTHO05D008941 3.3e-60 236.1 283 70.0
Eucgr.D02028 Eucalyptus grandis HOM05D007062 ORTHO05D008941 3.3e-60 236.1 232 64.2
AT1G12250 Arabidopsis thaliana HOM05D007062 ORTHO05D008941 2.8e-59 233.0 283 69.3
HPP92_003260 Vanilla planifolia HOM05D007062 ORTHO05D008941 2.8e-59 233.0 252 75.4
BcaC07g41714 Brassica carinata HOM05D007062 ORTHO05D008941 6.1e-59 231.9 291 68.4
vmacro05405 Vaccinium macrocarpon HOM05D007062 ORTHO05D008941 6.1e-59 231.9 196 89.8
EL10Ac5g13006 Beta vulgaris HOM05D007062 ORTHO05D008941 8.0e-59 231.5 276 59.8
BraA09t41747Z Brassica rapa HOM05D007062 ORTHO05D008941 8.0e-59 231.5 283 69.6
Ah.02g116970 Amaranthus hybridus HOM05D007062 ORTHO05D008941 1.0e-58 231.1 252 71.8
PSO782G2909 Papaver somniferum HOM05D007062 ORTHO05D008941 1.0e-58 231.1 299 65.9
SGA_v2.0_scaffold120G32845 Striga asiatica HOM05D007062 ORTHO05D008941 1.0e-58 231.1 280 69.6
C08p47500 Brassica napus HOM05D007062 ORTHO05D008941 1.4e-58 230.7 281 69.0
Sp1g10870 Schrenkiella parvula HOM05D007062 ORTHO05D008941 1.4e-58 230.7 291 68.4
AL1G23540 Arabidopsis lyrata HOM05D007062 ORTHO05D008941 3.0e-58 229.6 283 68.2
BolC8t52291H Brassica oleracea HOM05D007062 ORTHO05D008941 4.0e-58 229.2 281 69.0
A09p63980 Brassica napus HOM05D007062 ORTHO05D008941 1.2e-57 227.6 281 68.7
Hund11577 Selenicereus undatus HOM05D007062 ORTHO05D008941 1.5e-57 227.3 278 64.4
HanXRQChr02g0049591 Helianthus annuus HOM05D007062 ORTHO05D008941 7.5e-57 224.9 209 86.1
Medtr5g012110 Medicago truncatula HOM05D007062 ORTHO05D008941 9.8e-57 224.6 281 68.3
Gohir.A08G172400 Gossypium hirsutum HOM05D007062 ORTHO05D008941 4.9e-56 222.2 193 81.3
SEGI_22381 Sequoiadendron giganteum HOM05D007062 ORTHO05D008941 2.4e-55 219.9 235 75.7
ATR0568G204 Amborella trichopoda HOM05D007062 ORTHO05D008941 1.3e-53 214.2 196 84.7
Mapoly0083s0077 Marchantia polymorpha HOM05D007062 ORTHO05D008941 3.0e-53 213.0 279 59.5
FAN13G1422 Fragaria x ananassa HOM05D007062 ORTHO05D008941 3.3e-52 209.5 231 58.0
SMO137G0193 Selaginella moellendorffii HOM05D007062 ORTHO05D008941 3.3e-52 209.5 216 69.0
CBR_g19734 Chara braunii HOM05D007062 ORTHO05D008941 4.0e-50 202.6 214 69.6
AUR62007471 Chenopodium quinoa HOM05D007062 ORTHO05D008941 8.9e-50 201.4 181 84.0
Pp3c21_17930 Physcomitrium patens HOM05D007062 ORTHO05D008941 4.7e-43 179.1 211 70.1
Glyma.01G211100 Glycine max HOM05D007062 ORTHO05D008941 4.0e-42 176.0 249 47.0
COL.COLO4_37223 Corchorus olitorius HOM05D007062 ORTHO05D008941 1.4e-39 167.5 87 90.8
Hma1.2p1_1691F.1_g297800 Hydrangea macrophylla HOM05D007062 ORTHO05D008941 5.4e-39 165.6 129 91.5
Hma1.2p1_1691F.1_g297810 Hydrangea macrophylla HOM05D007062 ORTHO05D008941 1.2e-38 164.5 84 90.5
DCAR_004919 Daucus carota HOM05D007062 ORTHO05D008941 1.0e-37 161.4 132 89.4
CDE04G1356 Ceratophyllum demersum HOM05D007062 ORTHO05D008941 3.0e-37 159.8 156 78.8
AUR62039929 Chenopodium quinoa HOM05D007062 ORTHO05D008941 3.3e-36 156.4 132 79.5
AUR62043761 Chenopodium quinoa HOM05D007062 ORTHO05D008941 3.3e-36 156.4 132 79.5
CARHR012560 Cardamine hirsuta HOM05D007062 ORTHO05D008941 4.3e-36 156.0 85 88.2
Cfa012777 Carpinus fangiana HOM05D007062 ORTHO05D008941 3.6e-35 152.9 217 71.9
Dinv39100 Davidia involucrata HOM05D007062 ORTHO05D008941 2.2e-32 143.7 191 53.9
AagrBONN_evm.TU.Sc2ySwM_228.1920 Anthoceros agrestis HOM05D000741 ORTHO05D000506 2.7e-30 136.7 199 66.3
Haze_08582 Corylus avellana HOM05D007062 ORTHO05D008941 6.6e-29 132.1 143 66.4
GSVIVG01001268001 Vitis vinifera HOM05D007062 ORTHO05D008941 5.6e-28 129.0 157 51.0
Nn6g34047 Nelumbo nucifera HOM05D007062 ORTHO05D008941 2.0e-25 120.6 157 58.6
Psat2g178680 Pisum sativum HOM05D007062 ORTHO05D008941 1.3e-24 117.9 176 76.7
CDE04G0607 Ceratophyllum demersum HOM05D007062 ORTHO05D008941 1.1e-20 104.8 68 76.5
CAN.G1293.1 Capsicum annuum HOM05D007062 ORTHO05D008941 3.3e-20 103.2 100 56.0
Cre17.g721700 Chlamydomonas reinhardtii HOM05D007062 ORTHO05D008941 2.6e-17 93.6 184 51.1
COL.COLO4_37221 Corchorus olitorius HOM05D007062 ORTHO05D008941 6.7e-13 79.0 67 59.7
Lj8A257G61 Lonicera japonica HOM05D007062 ORTHO05D008941 3.3e-12 76.6 45 80.0
MCO12G419 Micromonas commoda HOM05D007062 ORTHO05D008941 2.6e-09 67.0 44 70.5
Rhsim10G0100700 Rhododendron simsii HOM05D000726 ORTHO05D007554 2.2e-08 63.9 87 49.4
SEGI_25676 Sequoiadendron giganteum HOM05D007062 ORTHO05D008941 1.4e-07 61.2 54 61.1


User provided reference genes

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