Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G212700 Prunus persica HOM05D006187 ORTHO05D007621 1.5e-118 429.5 208 100.0
MD11G1218600 Malus domestica HOM05D006187 ORTHO05D007621 1.0e-114 416.8 208 96.6
COL.COLO4_09662 Corchorus olitorius HOM05D006187 ORTHO05D007621 9.7e-110 400.2 209 91.4
CiPaw.11G189300 Carya illinoinensis HOM05D006187 ORTHO05D007621 2.8e-109 398.7 208 92.3
Gohir.D01G066500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 3.7e-109 398.3 209 90.9
RcHm_v2.0_Chr5g0039431 Rosa chinensis HOM05D006187 ORTHO05D007621 8.2e-109 397.1 208 91.3
FvH4_3g22670 Fragaria vesca HOM05D006187 ORTHO05D007621 1.4e-108 396.4 208 90.9
Gorai.002G088500 Gossypium raimondii HOM05D006187 ORTHO05D007621 1.4e-108 396.4 209 90.9
Gohir.A01G079500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 2.0e-107 392.5 209 89.5
CiPaw.12G129700 Carya illinoinensis HOM05D006187 ORTHO05D007621 1.0e-106 390.2 208 89.4
Haze_09689 Corylus avellana HOM05D006187 ORTHO05D007621 1.3e-106 389.8 209 89.5
Thecc.07G036900 Theobroma cacao HOM05D006187 ORTHO05D007621 1.3e-106 389.8 209 88.5
TAR626G1058 Trochodendron aralioides HOM05D006187 ORTHO05D007621 2.2e-106 389.0 209 88.5
Duzib170G0579 Durio zibethinus HOM05D006187 ORTHO05D007621 3.8e-106 388.3 209 89.0
Manes.15G071900 Manihot esculenta HOM05D006187 ORTHO05D007621 1.4e-105 386.3 209 89.0
Nn1g03532 Nelumbo nucifera HOM05D006187 ORTHO05D007621 1.4e-105 386.3 209 87.1
FAN16G3112 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.9e-105 386.0 220 85.9
Cc05_g13690 Coffea canephora HOM05D006187 ORTHO05D007621 4.2e-105 384.8 209 88.5
arahy.Tifrunner.gnm1.ann1.KHU2SV Arachis hypogaea HOM05D006187 ORTHO05D007621 5.5e-105 384.4 209 88.5
arahy.Tifrunner.gnm1.ann1.YIAG1Z Arachis hypogaea HOM05D006187 ORTHO05D007621 5.5e-105 384.4 209 88.5
Eucgr.F00764 Eucalyptus grandis HOM05D006187 ORTHO05D007621 5.5e-105 384.4 209 88.0
Potri.001G435500 Populus trichocarpa HOM05D006187 ORTHO05D007621 5.5e-105 384.4 209 87.6
Dinv40753 Davidia involucrata HOM05D006187 ORTHO05D007621 9.4e-105 383.6 208 87.0
Ciclev10009486m.g Citrus clementina HOM05D006187 ORTHO05D007621 1.2e-104 383.3 209 87.6
Cfa020345 Carpinus fangiana HOM05D006187 ORTHO05D007621 2.1e-104 382.5 209 87.6
DCAR_022562 Daucus carota HOM05D006187 ORTHO05D007621 3.6e-104 381.7 209 86.1
Potri.011G139500 Populus trichocarpa HOM05D006187 ORTHO05D007621 4.6e-104 381.3 209 88.0
RhsimUnG0250600 Rhododendron simsii HOM05D006187 ORTHO05D007621 6.1e-104 380.9 209 86.6
Sed0017183 Sechium edule HOM05D006187 ORTHO05D007621 7.9e-104 380.6 209 86.1
CANSAT11G0252 Cannabis sativa HOM05D006187 ORTHO05D007621 1.0e-103 380.2 209 86.1
PGR083G2749 Punica granatum HOM05D006187 ORTHO05D007621 1.0e-103 380.2 209 86.6
FAN11G0395 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.4e-103 379.8 229 82.5
Dinv22262 Davidia involucrata HOM05D006187 ORTHO05D007621 1.8e-103 379.4 209 86.6
THA.LOC104816937 Tarenaya hassleriana HOM05D006187 ORTHO05D007621 2.3e-103 379.0 209 86.6
Lalb_Chr10g0106971 Lupinus albus HOM05D006187 ORTHO05D007621 3.0e-103 378.6 209 86.6
FAN25G1478 Fragaria x ananassa HOM05D006187 ORTHO05D007621 5.1e-103 377.9 229 82.1
TWI39G1048 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 5.1e-103 377.9 209 86.1
AUR62020447 Chenopodium quinoa HOM05D006187 ORTHO05D007621 6.7e-103 377.5 209 86.1
LjContig00272g0005891 Lotus japonicus HOM05D006187 ORTHO05D007621 6.7e-103 377.5 209 85.2
VMungo0647G0583 Vigna mungo HOM05D006187 ORTHO05D007621 1.1e-102 376.7 209 85.6
ECA246G0646 Erigeron canadensis HOM05D006187 ORTHO05D007621 1.5e-102 376.3 209 86.1
Oeu005532.1 Olea europaea HOM05D006187 ORTHO05D007621 1.5e-102 376.3 209 85.2
CsaV3_7G021800 Cucumis sativus L. HOM05D006187 ORTHO05D007621 2.5e-102 375.6 209 84.7
FAN21G2137 Fragaria x ananassa HOM05D006187 ORTHO05D007621 3.3e-102 375.2 239 79.1
Peaxi162Scf00964g00021 Petunia axillaris HOM05D006187 ORTHO05D007621 4.3e-102 374.8 209 85.6
CSS0049447 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 5.7e-102 374.4 208 85.6
CAN.G337.132 Capsicum annuum HOM05D006187 ORTHO05D007621 5.7e-102 374.4 209 84.7
Ah.06g186030 Amaranthus hybridus HOM05D006187 ORTHO05D007621 1.3e-101 373.2 209 82.3
Phvul.008G266900 Phaseolus vulgaris HOM05D006187 ORTHO05D007621 1.7e-101 372.9 209 85.6
MSTRG.26280 Avicennia marina HOM05D006187 ORTHO05D007621 2.8e-101 372.1 209 85.2
AUR62015764 Chenopodium quinoa HOM05D006187 ORTHO05D007621 6.3e-101 370.9 209 84.2
Aa31LG10G3660 Aethionema arabicum HOM05D006187 ORTHO05D007621 1.4e-100 369.8 209 84.2
Ca_06320_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 2.4e-100 369.0 209 85.2
Ca_30809_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 2.4e-100 369.0 209 85.2
A06p02950 Brassica napus HOM05D006187 ORTHO05D007621 4.1e-100 368.2 209 82.8
GSVIVG01037647001 Vitis vinifera HOM05D006187 ORTHO05D007621 4.1e-100 368.2 209 84.2
Aqoxy1G03401 Aquilegia oxysepala HOM05D006187 ORTHO05D007621 6.9e-100 367.5 209 83.7
C06p05930 Brassica napus HOM05D006187 ORTHO05D007621 9.1e-100 367.1 209 83.3
PSO210G0259 Papaver somniferum HOM05D006187 ORTHO05D007621 9.1e-100 367.1 209 82.8
Solyc07g064590.3 Solanum lycopersicum HOM05D006187 ORTHO05D007621 1.2e-99 366.7 209 83.3
Psat2g010920 Pisum sativum HOM05D006187 ORTHO05D007621 1.5e-99 366.3 209 82.8
PGSC0003DMG400022319 Solanum tuberosum HOM05D006187 ORTHO05D007621 1.5e-99 366.3 209 82.8
Carub.0001s3971 Capsella rubella HOM05D006187 ORTHO05D007621 2.0e-99 365.9 209 83.3
TPR.G1184 Trifolium pratense HOM05D006187 ORTHO05D007621 2.6e-99 365.5 209 83.3
CARHR040720 Cardamine hirsuta HOM05D006187 ORTHO05D007621 3.4e-99 365.2 209 82.8
Thhalv10011780m.g Eutrema salsugineum HOM05D006187 ORTHO05D007621 3.4e-99 365.2 209 83.3
BcaB07g33507 Brassica carinata HOM05D006187 ORTHO05D007621 4.5e-99 364.8 209 82.8
PSO832G1277 Papaver somniferum HOM05D006187 ORTHO05D007621 7.7e-99 364.0 209 81.8
SalBow5G2755 Salvia bowleyana HOM05D006187 ORTHO05D007621 7.7e-99 364.0 225 80.0
BcaC08g43245 Brassica carinata HOM05D006187 ORTHO05D007621 1.3e-98 363.2 209 82.8
Sopen07g032780 Solanum pennellii HOM05D006187 ORTHO05D007621 1.3e-98 363.2 209 82.3
Zm00001eb207490 Zea mays HOM05D006187 ORTHO05D007621 1.3e-98 363.2 209 82.8
ATR0794G016 Amborella trichopoda HOM05D006187 ORTHO05D007621 2.2e-98 362.5 208 81.2
AL1G58340 Arabidopsis lyrata HOM05D006187 ORTHO05D007621 2.2e-98 362.5 209 81.8
BraA06t23501Z Brassica rapa HOM05D006187 ORTHO05D007621 2.9e-98 362.1 210 82.4
CSS0042680 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 3.8e-98 361.7 209 82.8
Migut.K00331 Erythranthe guttata HOM05D006187 ORTHO05D007621 5.0e-98 361.3 208 82.2
AT1G50670 Arabidopsis thaliana HOM05D006187 ORTHO05D007621 6.5e-98 360.9 209 81.3
Sp1g37520 Schrenkiella parvula HOM05D006187 ORTHO05D007621 6.5e-98 360.9 209 81.8
EL10Ac4g07806 Beta vulgaris HOM05D006187 ORTHO05D007621 8.5e-98 360.5 209 81.3
HPP92_016292 Vanilla planifolia HOM05D006187 ORTHO05D007621 1.9e-97 359.4 208 82.2
unitig_746.g26546 Utricularia gibba HOM05D006187 ORTHO05D007621 2.5e-97 359.0 209 81.3
Sc16g0006050 Simmondsia chinensis HOM05D006187 ORTHO05D007621 2.7e-96 355.5 209 80.9
SGA_v2.0_scaffold347G49550 Striga asiatica HOM05D006187 ORTHO05D007621 2.0e-94 349.4 208 79.3
Oeu062696.2 Olea europaea HOM05D006187 ORTHO05D007621 4.4e-94 348.2 243 71.2
Lalb_Chr17g0348481 Lupinus albus HOM05D006187 ORTHO05D007621 2.2e-93 345.9 190 87.9
TWI38G1854 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 2.2e-93 345.9 187 88.2
Lsat_1_v5_gn_5_3960 Lactuca sativa HOM05D006187 ORTHO05D007621 1.1e-92 343.6 191 85.3
Actinidia35344 Actinidia chinensis HOM05D006187 ORTHO05D007621 4.1e-92 341.7 209 79.4
CDE05G0514 Ceratophyllum demersum HOM05D006187 ORTHO05D007621 5.3e-92 341.3 208 76.9
MELO3C013167.2 Cucumis melo HOM05D006187 ORTHO05D007621 1.5e-91 339.7 189 84.7
Glyma.02G291000 Glycine max HOM05D006187 ORTHO05D007621 3.4e-91 338.6 193 83.9
ClCG09G010800 Citrullus lanatus HOM05D006187 ORTHO05D007621 5.9e-91 337.8 209 78.5
HanXRQChr05g0159371 Helianthus annuus HOM05D006187 ORTHO05D007621 1.0e-90 337.0 187 86.6
Glyma.14G023700 Glycine max HOM05D006187 ORTHO05D007621 1.3e-90 336.7 185 87.0
HanXRQChr08g0233871 Helianthus annuus HOM05D006187 ORTHO05D007621 2.9e-90 335.5 187 86.1
Medtr5g092720 Medicago truncatula HOM05D006187 ORTHO05D007621 3.8e-90 335.1 190 83.2
Sabra11G0125500 Salix brachista HOM05D006187 ORTHO05D007621 8.5e-90 334.0 288 61.5
Mapoly0105s0022 Marchantia polymorpha HOM05D006187 ORTHO05D007621 2.3e-87 325.9 209 73.7
SEGI_20110 Sequoiadendron giganteum HOM05D006187 ORTHO05D007621 2.3e-87 325.9 206 75.7
SMO201G0052 Selaginella moellendorffii HOM05D006187 ORTHO05D007621 2.0e-86 322.8 208 71.2
QL08p010320 Quercus lobata HOM05D006187 ORTHO05D007621 5.7e-86 321.2 202 78.7
Pp3c26_11120 Physcomitrium patens HOM05D006187 ORTHO05D007621 1.4e-84 316.6 206 73.3
Nitab4.5_0011129g0020 Nicotiana tabacum HOM05D006187 ORTHO05D007621 1.2e-78 297.0 208 71.6
AagrBONN_evm.TU.Sc2ySwM_344.4367 Anthoceros agrestis HOM05D004720 ORTHO05D007621 2.6e-78 295.8 205 67.3
vmacro09715 Vaccinium macrocarpon HOM05D006187 ORTHO05D007621 7.5e-78 294.3 164 85.4
BolC6t35706H Brassica oleracea HOM05D006187 ORTHO05D007621 7.7e-75 284.3 164 82.9
Lj1A872G52 Lonicera japonica HOM05D006187 ORTHO05D007621 1.6e-72 276.6 151 87.4
MCO07G461 Micromonas commoda HOM05D006187 ORTHO05D007621 1.8e-68 263.1 203 61.6
Cre09.g409050 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 3.1e-68 262.3 202 61.4
SHI26611 Sapria himalayana HOM05D006187 ORTHO05D007621 7.0e-68 261.2 184 67.9
Hma1.2p1_0673F.1_g201350 Hydrangea macrophylla HOM05D006187 ORTHO05D007621 2.3e-66 256.1 209 64.1
PSO675G5262 Papaver somniferum HOM05D006187 ORTHO05D007621 1.2e-62 243.8 210 57.6
CBR_g54108 Chara braunii HOM05D006187 ORTHO05D007621 1.1e-60 237.3 168 68.5
HPP92_016312 Vanilla planifolia HOM05D006187 ORTHO05D007621 5.6e-57 224.9 135 79.3
PRCOL_00006206 Prasinoderma coloniale HOM05D006187 ORTHO05D007621 1.0e-55 220.7 206 54.4
Cpa.g.sc97.3 Carica papaya HOM05D006187 ORTHO05D007621 3.5e-51 205.7 152 69.1
PSO541G4439 Papaver somniferum HOM05D006187 ORTHO05D007621 2.2e-45 186.4 206 48.1
MBI18_g14476_MAGBIO Magnolia biondii HOM05D006187 ORTHO05D007621 3.9e-42 175.6 152 64.5
Haze_26155 Corylus avellana HOM05D006187 ORTHO05D007621 3.3e-41 172.6 206 42.2
Prupe.4G233700 Prunus persica HOM05D006187 ORTHO05D007621 1.6e-40 170.2 170 56.5
Cre06.g274700 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 2.7e-35 152.9 136 51.5
Nitab4.5_0001913g0160 Nicotiana tabacum HOM05D006187 ORTHO05D007621 5.6e-33 145.2 84 82.1
Os02g0164800 Oryza sativa ssp. japonica HOM05D006187 ORTHO05D007621 2.1e-32 143.3 84 79.8
PSO675G9324 Papaver somniferum HOM05D006187 ORTHO05D007621 4.0e-31 139.0 137 52.6
Cfa025770 Carpinus fangiana HOM05D006187 ORTHO05D007621 2.0e-30 136.7 226 37.2
HPP92_016311 Vanilla planifolia HOM05D006187 ORTHO05D007621 5.4e-28 128.6 74 81.1
AUR62015776 Chenopodium quinoa HOM05D006187 ORTHO05D007621 7.6e-22 108.2 83 68.7
QL08p010315 Quercus lobata HOM05D006187 ORTHO05D007621 2.1e-16 90.1 43 88.4


User provided reference genes

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