Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G168800 Prunus persica HOM05D001506 ORTHO05D000455 1.4e-130 470.3 392 100.0
Prupe.4G168700 Prunus persica HOM05D001506 ORTHO05D000455 1.7e-35 154.5 490 57.1
Prupe.4G169900 Prunus persica HOM05D001506 ORTHO05D000455 8.9e-32 142.1 172 56.4
Prupe.4G163700 Prunus persica HOM05D001506 ORTHO05D000455 3.0e-27 127.1 168 73.2
Prupe.4G163000 Prunus persica HOM05D001506 ORTHO05D000455 3.9e-27 126.7 208 63.0
Prupe.4G163500 Prunus persica HOM05D001506 ORTHO05D000455 1.5e-26 124.8 169 69.2
Prupe.I002800 Prunus persica HOM05D001506 ORTHO05D000455 1.5e-26 124.8 486 56.0
Prupe.4G169200 Prunus persica HOM05D001506 ORTHO05D000455 7.3e-26 122.5 170 72.9
Prupe.2G104600 Prunus persica HOM05D001506 ORTHO05D000455 1.2e-25 121.7 176 71.0
Prupe.2G098400 Prunus persica HOM05D001506 ORTHO05D000455 3.6e-25 120.2 170 70.6
Prupe.4G169600 Prunus persica HOM05D001506 ORTHO05D000455 1.4e-24 118.2 168 73.8
Prupe.2G076700 Prunus persica HOM05D001506 ORTHO05D000455 4.0e-24 116.7 172 69.8
Prupe.4G169300 Prunus persica HOM05D001506 ORTHO05D000455 5.2e-24 116.3 171 70.2
Prupe.4G162900 Prunus persica HOM05D001506 ORTHO05D000455 9.0e-24 115.5 170 67.6
MD03G1227100 Malus domestica HOM05D001506 ORTHO05D000455 2.6e-23 114.0 203 59.6
Prupe.4G162800 Prunus persica HOM05D001506 ORTHO05D000455 2.6e-23 114.0 170 67.1
Prupe.4G163400 Prunus persica HOM05D001506 ORTHO05D000455 3.4e-23 113.6 173 68.2
Prupe.4G169500 Prunus persica HOM05D001506 ORTHO05D000455 4.4e-23 113.2 177 68.9
MD03G1240600 Malus domestica HOM05D001506 ORTHO05D000455 9.9e-23 112.1 180 63.9
Prupe.2G098500 Prunus persica HOM05D001506 ORTHO05D000455 4.9e-22 109.8 173 67.1
Prupe.2G098300 Prunus persica HOM05D001506 ORTHO05D000455 1.2e-20 105.1 170 67.1
Prupe.4G169700 Prunus persica HOM05D001506 ORTHO05D000455 1.6e-20 104.8 170 65.9
Prupe.4G163200 Prunus persica HOM05D001506 ORTHO05D000029 2.7e-20 104.0 174 60.3
Prupe.4G163800 Prunus persica HOM05D001506 ORTHO05D000455 4.6e-20 103.2 169 68.0
Prupe.4G169800 Prunus persica HOM05D001506 ORTHO05D000455 7.8e-20 102.4 177 66.1
Prupe.4G163100 Prunus persica HOM05D001506 ORTHO05D000455 1.7e-19 101.3 179 67.0
MD11G1249400 Malus domestica HOM05D001506 ORTHO05D000455 8.7e-19 99.0 165 62.4
Prupe.I002900 Prunus persica HOM05D001506 ORTHO05D000455 9.6e-18 95.5 173 67.1
RcHm_v2.0_Chr5g0082121 Rosa chinensis HOM05D001506 ORTHO05D000029 2.1e-17 94.4 410 51.7
Prupe.4G161800 Prunus persica HOM05D001506 ORTHO05D000455 2.4e-16 90.9 165 65.5
Prupe.4G162700 Prunus persica HOM05D001506 ORTHO05D000455 5.3e-16 89.7 171 65.5
FAN21G3398 Fragaria x ananassa HOM05D001506 ORTHO05D000029 2.0e-15 87.8 183 48.6
MD06G1055100 Malus domestica HOM05D001506 ORTHO05D000455 3.4e-15 87.0 172 63.4
Prupe.6G015500 Prunus persica HOM05D001506 ORTHO05D000455 4.5e-15 86.7 172 62.2
MD03G1224400 Malus domestica HOM05D001506 ORTHO05D000455 1.3e-14 85.1 170 61.8
Prupe.4G162000 Prunus persica HOM05D001506 ORTHO05D000455 1.7e-14 84.7 186 57.5
Prupe.4G162500 Prunus persica HOM05D001506 ORTHO05D000029 2.9e-14 84.0 190 33.7
FvH4_3g44871 Fragaria vesca HOM05D001506 ORTHO05D000029 6.4e-14 82.8 179 58.7
RcHm_v2.0_Chr5g0071241 Rosa chinensis HOM05D001506 ORTHO05D000455 1.4e-13 81.6 173 61.3
Prupe.4G162600 Prunus persica HOM05D001506 ORTHO05D000455 1.9e-13 81.3 116 73.3
MD00G1077400 Malus domestica HOM05D001506 ORTHO05D000455 2.4e-13 80.9 171 60.8
MD03G1192900 Malus domestica HOM05D001506 ORTHO05D000455 2.4e-13 80.9 170 64.1
MD00G1077300 Malus domestica HOM05D001506 ORTHO05D000455 3.2e-13 80.5 171 60.2
RcHm_v2.0_Chr4g0401291 Rosa chinensis HOM05D001506 ORTHO05D000455 4.2e-13 80.1 171 60.2
MD03G1017400 Malus domestica HOM05D001506 ORTHO05D000455 5.4e-13 79.7 187 56.7
RcHm_v2.0_Chr5g0083581 Rosa chinensis HOM05D001506 ORTHO05D000455 5.4e-13 79.7 185 56.8
FAN25G0304 Fragaria x ananassa HOM05D001506 ORTHO05D000455 7.1e-13 79.3 182 56.0
FAN21G1104 Fragaria x ananassa HOM05D001506 ORTHO05D000455 2.1e-12 77.8 230 48.3
FAN21G3761 Fragaria x ananassa HOM05D001506 ORTHO05D000455 2.7e-12 77.4 162 60.5
MD00G1082100 Malus domestica HOM05D001506 ORTHO05D000455 7.9e-12 75.9 183 56.3
MD11G1018900 Malus domestica HOM05D001506 ORTHO05D000455 7.9e-12 75.9 183 56.3
RcHm_v2.0_Chr5g0081581 Rosa chinensis HOM05D001506 ORTHO05D000455 7.9e-12 75.9 160 61.9
MD11G1018500 Malus domestica HOM05D001506 ORTHO05D000455 1.0e-11 75.5 183 56.3
RcHm_v2.0_Chr5g0082071 Rosa chinensis HOM05D001506 ORTHO05D000455 1.0e-11 75.5 173 57.8
RcHm_v2.0_Chr6g0254081 Rosa chinensis HOM05D001506 ORTHO05D000455 1.0e-11 75.5 161 62.1
FAN11G2215 Fragaria x ananassa HOM05D001506 ORTHO05D000455 1.8e-11 74.7 161 54.0
FAN25G3207 Fragaria x ananassa HOM05D001506 ORTHO05D000455 1.8e-11 74.7 182 54.9
MD00G1082300 Malus domestica HOM05D001506 ORTHO05D000029 1.8e-11 74.7 173 57.8
FAN25G1095 Fragaria x ananassa HOM05D001506 ORTHO05D000455 2.3e-11 74.3 161 60.2
Dinv36211 Davidia involucrata HOM05D001506 ORTHO05D000455 5.1e-11 73.2 148 53.4
RcHm_v2.0_Chr5g0081941 Rosa chinensis HOM05D001506 ORTHO05D000455 5.1e-11 73.2 171 59.6
MD03G1017700 Malus domestica HOM05D001506 ORTHO05D000455 8.7e-11 72.4 167 58.1
MD04G1167200 Malus domestica HOM05D001506 ORTHO05D000455 1.1e-10 72.0 174 56.9
RcHm_v2.0_Chr5g0073001 Rosa chinensis HOM05D001506 ORTHO05D000455 1.1e-10 72.0 170 59.4
RcHm_v2.0_Chr5g0081881 Rosa chinensis HOM05D001506 ORTHO05D000455 1.5e-10 71.6 185 55.1
FvH4_3g39490 Fragaria vesca HOM05D001506 ORTHO05D000455 1.9e-10 71.2 167 57.5
RcHm_v2.0_Chr5g0081991 Rosa chinensis HOM05D001506 ORTHO05D000455 1.9e-10 71.2 170 60.0
FAN11G0089 Fragaria x ananassa HOM05D001506 ORTHO05D000455 2.5e-10 70.9 182 53.8
MD11G1018800 Malus domestica HOM05D001506 ORTHO05D000455 2.5e-10 70.9 173 57.2
Prupe.4G246600 Prunus persica HOM05D001506 ORTHO05D000455 2.5e-10 70.9 180 56.7
Prupe.6G015600 Prunus persica HOM05D001506 ORTHO05D000455 3.3e-10 70.5 191 52.9
RcHm_v2.0_Chr1g0356371 Rosa chinensis HOM05D001506 ORTHO05D000455 3.3e-10 70.5 164 59.1
FvH4_3g44120 Fragaria vesca HOM05D001506 ORTHO05D000455 4.3e-10 70.1 161 60.2
FAN11G1491 Fragaria x ananassa HOM05D000071 ORTHO05D000029 5.6e-10 69.7 167 56.9
MD10G1317500 Malus domestica HOM05D001506 ORTHO05D000455 5.6e-10 69.7 182 55.5
FAN11G1463 Fragaria x ananassa HOM05D001506 ORTHO05D000455 9.6e-10 68.9 172 58.7
RcHm_v2.0_Chr5g0081721 Rosa chinensis HOM05D001506 ORTHO05D000455 9.6e-10 68.9 164 58.5
MD03G1017100 Malus domestica HOM05D001506 ORTHO05D000455 1.3e-09 68.6 170 57.6
MD11G1018300 Malus domestica HOM05D001506 ORTHO05D000455 1.3e-09 68.6 170 57.1
Prupe.6G009700 Prunus persica HOM05D001506 ORTHO05D000455 1.6e-09 68.2 181 55.8
RcHm_v2.0_Chr5g0082221 Rosa chinensis HOM05D001506 ORTHO05D000455 1.6e-09 68.2 170 58.8
RcHm_v2.0_Chr5g0082311 Rosa chinensis HOM05D001506 ORTHO05D000455 1.6e-09 68.2 170 58.8
RcHm_v2.0_Chr5g0081871 Rosa chinensis HOM05D001506 ORTHO05D000455 2.1e-09 67.8 170 58.8
MD10G1316900 Malus domestica HOM05D001506 ORTHO05D000455 2.8e-09 67.4 186 57.0
FAN21G2324 Fragaria x ananassa HOM05D001506 ORTHO05D000455 3.7e-09 67.0 176 55.7
FAN25G3783 Fragaria x ananassa HOM05D001506 ORTHO05D000455 3.7e-09 67.0 161 59.0
MD03G1243900 Malus domestica HOM05D001506 ORTHO05D000455 8.1e-09 65.9 167 58.1
FAN25G2167 Fragaria x ananassa HOM05D001506 ORTHO05D000455 1.1e-08 65.5 171 58.5
RcHm_v2.0_Chr5g0082401 Rosa chinensis HOM05D001506 ORTHO05D000455 1.1e-08 65.5 169 57.4
FvH4_3g39440 Fragaria vesca HOM05D001506 ORTHO05D000455 1.4e-08 65.1 173 55.5
FAN25G2730 Fragaria x ananassa HOM05D001506 ORTHO05D000455 1.4e-08 65.1 173 55.5
RcHm_v2.0_Chr5g0058421 Rosa chinensis HOM05D000071 ORTHO05D000029 2.4e-08 64.3 43 67.4
RcHm_v2.0_Chr5g0070981 Rosa chinensis HOM05D001506 ORTHO05D000455 2.4e-08 64.3 162 58.6
FvH4_3g38570 Fragaria vesca HOM05D001506 ORTHO05D000455 3.1e-08 63.9 170 55.9
FAN11G0797 Fragaria x ananassa HOM05D001506 ORTHO05D000455 3.1e-08 63.9 187 27.3
FAN11G1337 Fragaria x ananassa HOM05D001506 ORTHO05D000455 3.1e-08 63.9 170 55.9
RcHm_v2.0_Chr5g0082491 Rosa chinensis HOM05D001506 ORTHO05D000455 3.1e-08 63.9 170 57.6
Haze_23095 Corylus avellana HOM05D001506 ORTHO05D000455 4.0e-08 63.5 173 56.6
FAN21G0832 Fragaria x ananassa HOM05D001506 ORTHO05D000455 4.0e-08 63.5 154 59.1
Prupe.8G027500 Prunus persica HOM05D001506 ORTHO05D000455 4.0e-08 63.5 183 49.2
FvH4_3g45260 Fragaria vesca HOM05D001506 ORTHO05D000455 5.3e-08 63.2 170 55.9
FAN11G1318 Fragaria x ananassa HOM05D001506 ORTHO05D000455 5.3e-08 63.2 176 57.4
FAN25G3351 Fragaria x ananassa HOM05D001506 ORTHO05D000455 5.3e-08 63.2 170 55.3
MD00G1077600 Malus domestica HOM05D001506 ORTHO05D000029 6.9e-08 62.8 46 65.2
MD00G1077800 Malus domestica HOM05D001506 ORTHO05D000455 6.9e-08 62.8 169 56.8
RcHm_v2.0_Chr1g0319001 Rosa chinensis HOM05D001506 ORTHO05D000455 6.9e-08 62.8 164 57.3
MD03G1017300 Malus domestica HOM05D001506 ORTHO05D000455 9.0e-08 62.4 179 55.3
MD03G1022100 Malus domestica HOM05D001506 ORTHO05D000455 1.2e-07 62.0 177 54.8
RcHm_v2.0_Chr4g0401581 Rosa chinensis HOM05D001506 ORTHO05D000029 1.2e-07 62.0 41 68.3
RcHm_v2.0_Chr5g0082131 Rosa chinensis HOM05D001506 ORTHO05D000455 1.2e-07 62.0 168 57.1
RcHm_v2.0_Chr3g0460851 Rosa chinensis HOM05D001506 ORTHO05D000455 1.5e-07 61.6 169 56.2
FAN21G3266 Fragaria x ananassa HOM05D001506 ORTHO05D000455 2.0e-07 61.2 170 54.7
RcHm_v2.0_Chr5g0082281 Rosa chinensis HOM05D001506 ORTHO05D000455 2.0e-07 61.2 170 57.1
FAN11G2167 Fragaria x ananassa HOM05D001506 ORTHO05D000455 2.6e-07 60.8 170 55.3
MD11G1019000 Malus domestica HOM05D001506 ORTHO05D000455 2.6e-07 60.8 164 57.3
MD11G1248200 Malus domestica HOM05D001506 ORTHO05D000455 2.6e-07 60.8 46 69.6
MD03G1017800 Malus domestica HOM05D001506 ORTHO05D000455 3.4e-07 60.5 179 53.6
MD05G1342800 Malus domestica HOM05D001506 ORTHO05D000455 3.4e-07 60.5 183 54.6
FvH4_3g44880 Fragaria vesca HOM05D001506 ORTHO05D000455 4.5e-07 60.1 165 57.0
FAN11G1948 Fragaria x ananassa HOM05D001506 ORTHO05D000455 4.5e-07 60.1 167 56.9
FAN11G3464 Fragaria x ananassa HOM05D001506 ORTHO05D000455 4.5e-07 60.1 161 56.5
MD00G1082900 Malus domestica HOM05D001506 ORTHO05D000455 4.5e-07 60.1 167 55.7
RcHm_v2.0_Chr5g0071011 Rosa chinensis HOM05D001506 ORTHO05D000455 4.5e-07 60.1 169 57.4
RcHm_v2.0_Chr6g0264911 Rosa chinensis HOM05D000071 ORTHO05D000029 4.5e-07 60.1 129 66.7
RcHm_v2.0_Chr6g0288561 Rosa chinensis HOM05D000071 ORTHO05D000029 4.5e-07 60.1 150 60.0
Dinv36209 Davidia involucrata HOM05D001506 ORTHO05D000455 5.8e-07 59.7 165 56.4
FvH4_3g44961 Fragaria vesca HOM05D001506 ORTHO05D000455 5.8e-07 59.7 165 57.0
FvH4_3g45010 Fragaria vesca HOM05D001506 ORTHO05D000455 5.8e-07 59.7 170 54.7
FAN11G2219 Fragaria x ananassa HOM05D001506 ORTHO05D000455 5.8e-07 59.7 168 56.5
MD11G1019200 Malus domestica HOM05D000150 ORTHO05D002738 5.8e-07 59.7 44 61.4
RcHm_v2.0_Chr1g0324191 Rosa chinensis HOM05D001506 ORTHO05D000455 7.6e-07 59.3 167 56.9
RcHm_v2.0_Chr5g0082061 Rosa chinensis HOM05D001506 ORTHO05D000455 7.6e-07 59.3 155 61.3
MD11G1018400 Malus domestica HOM05D001506 ORTHO05D000455 9.9e-07 58.9 178 52.8
RcHm_v2.0_Chr5g0080431 Rosa chinensis HOM05D001506 ORTHO05D000455 9.9e-07 58.9 183 54.1
RcHm_v2.0_Chr5g0081651 Rosa chinensis HOM05D001506 ORTHO05D000455 9.9e-07 58.9 170 55.9
FAN08G3688 Fragaria x ananassa HOM05D001490 ORTHO05D000455 1.3e-06 58.5 203 49.3
FvH4_3g44920 Fragaria vesca HOM05D001506 ORTHO05D000455 1.7e-06 58.2 167 56.3
FAN16G3500 Fragaria x ananassa HOM05D001506 ORTHO05D000455 1.7e-06 58.2 160 56.2
MD03G1131400 Malus domestica HOM05D001506 ORTHO05D000455 1.7e-06 58.2 154 59.7
MD11G1017800 Malus domestica HOM05D001506 ORTHO05D000455 1.7e-06 58.2 171 55.0
MD00G1082400 Malus domestica HOM05D001506 ORTHO05D000455 2.2e-06 57.8 171 55.0
RcHm_v2.0_Chr5g0061041 Rosa chinensis HOM05D001506 ORTHO05D000455 2.2e-06 57.8 126 57.9
RcHm_v2.0_Chr5g0082631 Rosa chinensis HOM05D000071 ORTHO05D000029 2.2e-06 57.8 45 60.0
FAN11G0737 Fragaria x ananassa HOM05D001506 ORTHO05D000455 2.9e-06 57.4 170 54.1
RcHm_v2.0_Chr5g0082191 Rosa chinensis HOM05D001506 ORTHO05D000455 2.9e-06 57.4 188 61.2
RcHm_v2.0_Chr5g0082911 Rosa chinensis HOM05D001506 ORTHO05D000455 2.9e-06 57.4 43 62.8
CiPaw.13G168800 Carya illinoinensis HOM05D000071 ORTHO05D000029 3.8e-06 57.0 208 47.1
FAN16G3150 Fragaria x ananassa HOM05D001506 ORTHO05D000455 3.8e-06 57.0 165 57.0
MD03G1018300 Malus domestica HOM05D001506 ORTHO05D000455 3.8e-06 57.0 174 54.6
MD05G1078800 Malus domestica HOM05D001506 ORTHO05D000455 3.8e-06 57.0 166 56.0
RcHm_v2.0_Chr5g0082771 Rosa chinensis HOM05D000071 ORTHO05D000029 3.8e-06 57.0 46 60.9
RcHm_v2.0_Chr6g0254111 Rosa chinensis HOM05D000071 ORTHO05D000029 3.8e-06 57.0 44 59.1
RcHm_v2.0_Chr5g0082341 Rosa chinensis HOM05D001506 ORTHO05D000029 8.4e-06 55.8 170 55.9


User provided reference genes

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