Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G168500 Prunus persica HOM05D001506 ORTHO05D000455 3.7e-82 308.1 155 100.0
FAN25G3207 Fragaria x ananassa HOM05D001506 ORTHO05D000455 1.6e-21 106.7 131 53.4
FAN16G3133 Fragaria x ananassa HOM05D001506 ORTHO05D000455 4.8e-21 105.1 128 53.1
MD11G1249300 Malus domestica HOM05D001506 ORTHO05D000455 4.8e-21 105.1 119 52.9
RcHm_v2.0_Chr4g0401571 Rosa chinensis HOM05D001506 ORTHO05D000455 2.1e-16 89.7 155 38.7
RcHm_v2.0_Chr4g0401451 Rosa chinensis HOM05D001506 ORTHO05D000455 3.5e-16 89.0 102 46.1
FAN21G0398 Fragaria x ananassa HOM05D001506 ORTHO05D000455 2.3e-15 86.3 104 49.0
Prupe.4G162500 Prunus persica HOM05D001506 ORTHO05D000029 2.3e-15 86.3 93 52.7
MD11G1019000 Malus domestica HOM05D001506 ORTHO05D000455 3.9e-15 85.5 64 65.6
MD11G1248700 Malus domestica HOM05D001506 ORTHO05D000455 8.7e-15 84.3 103 52.4
Haze_23091 Corylus avellana HOM05D001506 ORTHO05D000455 1.1e-14 84.0 151 35.8
CiPaw.12G005100 Carya illinoinensis HOM05D001506 ORTHO05D000455 2.5e-14 82.8 108 44.4
RcHm_v2.0_Chr7g0219981 Rosa chinensis HOM05D001506 ORTHO05D000455 2.5e-14 82.8 65 67.7
RcHm_v2.0_Chr6g0288571 Rosa chinensis HOM05D001506 ORTHO05D000455 5.7e-14 81.6 99 47.5
MD03G1017400 Malus domestica HOM05D001506 ORTHO05D000455 7.4e-14 81.3 103 48.5
FAN20G2034 Fragaria x ananassa HOM05D001506 ORTHO05D000455 1.3e-13 80.5 114 42.1
MD00G1077700 Malus domestica HOM05D001506 ORTHO05D000455 1.6e-13 80.1 69 65.2
RcHm_v2.0_Chr5g0061041 Rosa chinensis HOM05D001506 ORTHO05D000455 4.8e-13 78.6 66 57.6
FAN16G1850 Fragaria x ananassa HOM05D001506 ORTHO05D000455 1.1e-12 77.4 99 45.5
RcHm_v2.0_Chr1g0325621 Rosa chinensis HOM05D001506 ORTHO05D000455 1.1e-12 77.4 101 46.5
RcHm_v2.0_Chr5g0081811 Rosa chinensis HOM05D001506 ORTHO05D000455 1.1e-12 77.4 100 50.0
RcHm_v2.0_Chr4g0390631 Rosa chinensis HOM05D001506 ORTHO05D000455 1.4e-12 77.0 110 40.9
RcHm_v2.0_Chr5g0082091 Rosa chinensis HOM05D001506 ORTHO05D000455 4.1e-12 75.5 104 47.1
RcHm_v2.0_Chr5g0082491 Rosa chinensis HOM05D001506 ORTHO05D000455 5.3e-12 75.1 108 46.3
MD03G1018000 Malus domestica HOM05D001506 ORTHO05D000455 1.5e-11 73.6 67 58.2
Haze_23684 Corylus avellana HOM05D001506 ORTHO05D000455 2.6e-11 72.8 107 41.1
FAN11G3464 Fragaria x ananassa HOM05D001506 ORTHO05D000455 5.9e-11 71.6 63 57.1
RcHm_v2.0_Chr5g0082571 Rosa chinensis HOM05D001506 ORTHO05D000455 2.9e-10 69.3 103 44.7
Prupe.6G009600 Prunus persica HOM05D001506 ORTHO05D000455 1.4e-09 67.0 133 40.6
MD03G1017300 Malus domestica HOM05D001506 ORTHO05D000455 7.2e-09 64.7 56 57.1
Prupe.4G162600 Prunus persica HOM05D001506 ORTHO05D000455 9.4e-09 64.3 115 40.0
MD05G1342800 Malus domestica HOM05D001506 ORTHO05D000455 2.1e-08 63.2 95 45.3
THA.LOC104798562 Tarenaya hassleriana HOM05D001506 ORTHO05D000455 2.1e-08 63.2 65 49.2
BcaC03g15368 Brassica carinata HOM05D000094 ORTHO05D000455 2.7e-08 62.8 64 42.2
A02p17930 Brassica napus HOM05D000094 ORTHO05D000455 2.7e-08 62.8 64 42.2
C02p29810 Brassica napus HOM05D000094 ORTHO05D000455 2.7e-08 62.8 64 42.2
BolC2t09027H Brassica oleracea HOM05D000094 ORTHO05D000455 2.7e-08 62.8 64 42.2
BraA02t06840Z Brassica rapa HOM05D000094 ORTHO05D000455 2.7e-08 62.8 64 42.2
Dinv37808 Davidia involucrata HOM05D000094 ORTHO05D000455 4.6e-08 62.0 58 50.0
MD03G1017100 Malus domestica HOM05D001506 ORTHO05D000455 4.6e-08 62.0 49 63.3
CiPaw.14G128100 Carya illinoinensis HOM05D001506 ORTHO05D000455 6.1e-08 61.6 126 34.9
FAN25G2420 Fragaria x ananassa HOM05D001506 ORTHO05D000455 1.8e-07 60.1 53 58.5
Prupe.6G116800 Prunus persica HOM05D001506 ORTHO05D000455 2.3e-07 59.7 92 41.3
Haze_23683 Corylus avellana HOM05D001506 ORTHO05D000455 3.0e-07 59.3 55 52.7
AT1G72300 Arabidopsis thaliana HOM05D000094 ORTHO05D000455 5.1e-07 58.5 64 39.1
Prupe.6G009700 Prunus persica HOM05D001506 ORTHO05D000455 5.1e-07 58.5 35 82.9
CiPaw.12G005300 Carya illinoinensis HOM05D001506 ORTHO05D000455 6.7e-07 58.2 49 51.0
CiPaw.12G005500 Carya illinoinensis HOM05D001506 ORTHO05D000455 6.7e-07 58.2 49 55.1
CiPaw.12G005700 Carya illinoinensis HOM05D001506 ORTHO05D000455 6.7e-07 58.2 49 55.1
Cc04_g00520 Coffea canephora HOM05D000094 ORTHO05D000455 1.5e-06 57.0 72 45.8
Haze_23098 Corylus avellana HOM05D001506 ORTHO05D000455 1.5e-06 57.0 64 43.8
BcaB03g13011 Brassica carinata HOM05D001506 ORTHO05D000455 2.0e-06 56.6 64 40.6
CARHR017820 Cardamine hirsuta HOM05D001506 ORTHO05D000455 3.3e-06 55.8 64 39.1
Zm00001eb424910 Zea mays HOM05D001506 ORTHO05D000455 3.3e-06 55.8 61 47.5
AT1G17240 Arabidopsis thaliana HOM05D001506 ORTHO05D000455 5.7e-06 55.1 64 39.1
Aa31LG7G2050 Aethionema arabicum HOM05D001506 ORTHO05D000455 7.4e-06 54.7 64 42.2
Glyma.03G262500 Glycine max HOM05D000094 ORTHO05D000455 7.4e-06 54.7 62 43.5
CARHR261670 Cardamine hirsuta HOM05D001506 ORTHO05D000455 9.7e-06 54.3 62 41.9
RcHm_v2.0_Chr6g0254101 Rosa chinensis HOM05D001506 ORTHO05D000455 9.7e-06 54.3 47 59.6


User provided reference genes

Program Settings