Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 3.5e-61 240.4 120 100.0
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 2.6e-56 224.2 120 93.3
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 8.6e-52 209.1 120 86.7
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 1.2e-45 188.7 120 78.3
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 1.6e-45 188.3 119 79.0
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.6e-45 188.3 119 79.0
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.7e-45 187.6 119 78.2
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.7e-45 187.6 119 78.2
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.3e-44 184.5 120 75.8
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 4.3e-43 180.3 120 70.8
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 5.6e-43 179.9 120 72.5
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 1.2e-42 178.7 120 75.0
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 1.6e-42 178.3 120 72.5
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 2.1e-42 177.9 120 74.2
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 4.7e-42 176.8 121 72.7
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 8.1e-42 176.0 121 75.2
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 1.1e-41 175.6 119 71.4
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 1.1e-41 175.6 119 70.6
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 1.5e-40 171.8 120 67.5
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 1.5e-40 171.8 120 67.5
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 2.0e-40 171.4 119 68.1
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 7.6e-40 169.5 119 68.1
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 1.3e-39 168.7 119 68.9
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 2.2e-39 167.9 120 66.7
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 2.2e-39 167.9 120 66.7
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 2.9e-39 167.5 120 65.8
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 2.4e-38 164.5 122 67.2
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 3.5e-37 160.6 120 61.7
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 6.0e-37 159.8 120 63.3
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 7.8e-37 159.5 119 64.7
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 7.8e-37 159.5 119 64.7
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 1.0e-36 159.1 120 65.0
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 1.0e-36 159.1 110 67.3
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 2.3e-36 157.9 120 63.3
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 3.0e-36 157.5 120 61.7
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 6.6e-36 156.4 119 64.7
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 5.6e-35 153.3 122 62.3
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 6.2e-34 149.8 120 60.8
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 6.2e-34 149.8 120 59.2
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 8.1e-34 149.4 122 61.5
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 2.4e-33 147.9 122 60.7
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 1.2e-32 145.6 113 62.8
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 4.4e-32 143.7 119 62.2
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 9.9e-32 142.5 122 59.0
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 2.2e-31 141.4 121 61.2
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 2.9e-31 141.0 119 57.1
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 2.9e-31 141.0 128 55.5
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 2.9e-31 141.0 115 60.0
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 4.9e-31 140.2 117 57.3
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 1.1e-30 139.0 117 56.4
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 5.4e-30 136.7 116 61.2
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 7.1e-30 136.3 121 57.9
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 1.2e-29 135.6 121 53.7
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 1.6e-29 135.2 125 56.8
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 2.7e-29 134.4 128 53.9
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 6.0e-29 133.3 121 54.5
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 6.0e-29 133.3 113 59.3
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 6.0e-29 133.3 119 56.3
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 7.9e-29 132.9 127 53.5
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 1.3e-28 132.1 113 57.5
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 2.3e-28 131.3 113 59.3
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 2.3e-28 131.3 128 53.1
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 2.3e-28 131.3 128 53.1
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 1.1e-27 129.0 122 57.4
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 2.5e-27 127.9 116 54.3
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 3.3e-27 127.5 123 54.5
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 5.6e-27 126.7 123 54.5
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 1.3e-26 125.6 126 53.2
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 1.6e-26 125.2 113 54.9
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 4.8e-26 123.6 113 54.0
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 1.1e-25 122.5 122 52.5
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 1.8e-25 121.7 132 53.0
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 3.1e-25 120.9 121 52.9
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 3.1e-25 120.9 124 54.8
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 5.3e-25 120.2 134 50.0
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 6.9e-25 119.8 85 65.9
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 2.0e-24 118.2 124 52.4
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 3.4e-24 117.5 119 50.4
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 4.5e-24 117.1 115 50.4
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 8.4e-23 112.8 126 50.8
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 1.1e-22 112.5 133 50.4
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 1.4e-22 112.1 133 49.6
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 1.4e-22 112.1 118 53.4
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 3.2e-22 110.9 132 50.8
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 3.2e-22 110.9 130 50.0
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 3.2e-22 110.9 70 72.9
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 5.4e-22 110.2 128 50.8
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 9.3e-22 109.4 117 50.4
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 1.2e-21 109.0 135 48.1
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 1.8e-20 105.1 123 48.8
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 1.8e-20 105.1 123 48.8
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 3.0e-20 104.4 127 48.8
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 6.7e-20 103.2 111 52.3
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 8.7e-20 102.8 111 52.3
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 1.9e-19 101.7 71 60.6
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 3.3e-19 100.9 130 46.9
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 2.1e-18 98.2 127 44.1
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 1.8e-17 95.1 100 50.0
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 4.5e-16 90.5 120 41.7
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 7.6e-16 89.7 120 41.7
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 1.4e-14 85.5 121 42.1
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 7.1e-14 83.2 109 44.0
ATR1098G023 Amborella trichopoda HOM05D006918 ORTHO05D008525 1.1e-09 69.3 41 75.6


User provided reference genes

Program Settings