Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G123400 Prunus persica HOM05D006967 ORTHO05D008692 5.5e-256 887.1 437 100.0
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 5.8e-189 664.5 390 83.6
RcHm_v2.0_Chr5g0022471 Rosa chinensis HOM05D006967 ORTHO05D008692 2.7e-170 602.4 392 77.0
FAN11G3906 Fragaria x ananassa HOM05D006967 ORTHO05D008692 6.6e-169 597.8 388 75.5
FvH4_3g13520 Fragaria vesca HOM05D006967 ORTHO05D008692 1.1e-168 597.0 391 75.4
FAN21G4071 Fragaria x ananassa HOM05D006967 ORTHO05D008692 2.4e-166 589.3 400 72.8
FAN25G2282 Fragaria x ananassa HOM05D006967 ORTHO05D008692 3.4e-165 585.5 388 73.7
FAN16G1037 Fragaria x ananassa HOM05D006967 ORTHO05D008692 2.5e-147 526.2 339 74.9
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 6.9e-142 508.1 390 64.9
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 2.9e-140 502.7 391 66.0
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 2.7e-138 496.1 389 64.5
CSS0034338 Camellia sinensis var. sinensis HOM05D006967 ORTHO05D008692 5.7e-136 488.4 392 62.8
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 6.9e-134 481.5 388 63.1
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 9.0e-134 481.1 387 62.5
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 3.6e-130 469.2 392 60.7
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 2.2e-127 459.9 351 64.7
Nn7g38428 Nelumbo nucifera HOM05D006967 ORTHO05D008692 2.4e-126 456.4 388 59.0
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 3.9e-121 439.1 392 57.7
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 1.5e-120 437.2 390 58.7
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 4.4e-120 435.6 387 57.1
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 4.8e-119 432.2 387 56.3
Gohir.D13G112300 Gossypium hirsutum HOM05D006967 ORTHO05D008692 4.8e-119 432.2 387 56.3
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 9.1e-118 427.9 400 57.0
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 2.0e-117 426.8 389 56.8
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 2.0e-117 426.8 431 52.4
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 2.6e-117 426.4 389 57.6
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 4.5e-117 425.6 392 56.4
vmacro03578 Vaccinium macrocarpon HOM05D006967 ORTHO05D008692 1.0e-116 424.5 465 49.5
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 1.5e-115 420.6 388 56.2
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 1.5e-115 420.6 395 55.9
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 1.9e-115 420.2 438 50.9
Rhsim13G0136900 Rhododendron simsii HOM05D006967 ORTHO05D008692 1.9e-115 420.2 364 57.4
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 4.2e-115 419.1 423 52.7
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 4.7e-114 415.6 446 51.6
MBI10_g30431_MAGBIO Magnolia biondii HOM05D006967 ORTHO05D008692 6.1e-114 415.2 391 56.5
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 2.3e-113 413.3 394 54.1
Aa31LG6G2720 Aethionema arabicum HOM05D006967 ORTHO05D008692 2.0e-112 410.2 397 54.2
Peaxi162Scf00715g00310 Petunia axillaris HOM05D006967 ORTHO05D008692 2.6e-109 399.8 387 54.8
Sp7g18650 Schrenkiella parvula HOM05D006967 ORTHO05D008692 5.9e-109 398.7 393 53.4
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 7.7e-109 398.3 394 53.8
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 1.3e-108 397.5 394 52.8
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 3.8e-108 396.0 399 53.6
THA.LOC104806234 Tarenaya hassleriana HOM05D006967 ORTHO05D008692 3.8e-108 396.0 426 52.1
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 1.1e-107 394.4 419 50.4
AT4G20310 Arabidopsis thaliana HOM05D006967 ORTHO05D008692 1.2e-106 391.0 382 54.2
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 2.7e-106 389.8 395 52.7
Carub.0007s2087 Capsella rubella HOM05D006967 ORTHO05D008692 3.6e-106 389.4 391 52.7
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 3.6e-106 389.4 377 53.6
Thhalv10024898m.g Eutrema salsugineum HOM05D006967 ORTHO05D008692 3.6e-106 389.4 419 51.3
Oeu008739.3 Olea europaea HOM05D006967 ORTHO05D008692 6.1e-106 388.7 396 53.5
AL7G33600 Arabidopsis lyrata HOM05D006967 ORTHO05D008692 2.3e-105 386.7 391 52.9
BcaNung03720 Brassica carinata HOM05D006967 ORTHO05D008692 2.3e-105 386.7 412 50.7
Lj2A340G21 Lonicera japonica HOM05D006967 ORTHO05D008692 2.3e-105 386.7 341 57.2
AUR62032339 Chenopodium quinoa HOM05D006967 ORTHO05D008692 3.0e-105 386.3 388 52.6
Sopen01g019010 Solanum pennellii HOM05D006967 ORTHO05D008692 4.0e-105 386.0 396 51.8
Solyc01g049910.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 2.2e-103 380.2 395 51.9
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 2.2e-103 380.2 419 49.2
A01p12010 Brassica napus HOM05D006967 ORTHO05D008692 4.8e-103 379.0 412 49.8
BraA01t01143Z Brassica rapa HOM05D006967 ORTHO05D008692 4.8e-103 379.0 412 49.3
BolC1t01391H Brassica oleracea HOM05D006967 ORTHO05D008692 8.3e-103 378.3 412 49.3
BcaC09g51322 Brassica carinata HOM05D006967 ORTHO05D008692 1.1e-102 377.9 412 49.0
C01p14260 Brassica napus HOM05D006967 ORTHO05D008692 1.4e-102 377.5 412 49.0
BcaNung03721 Brassica carinata HOM05D006967 ORTHO05D008692 1.8e-102 377.1 392 51.5
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 5.9e-101 372.1 395 49.1
Migut.G00899 Erythranthe guttata HOM05D006967 ORTHO05D008692 2.9e-100 369.8 384 52.1
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 2.9e-100 369.8 384 51.6
Solyc01g020520.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 2.9e-100 369.8 401 50.1
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 1.1e-99 367.9 341 55.4
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 5.5e-99 365.5 400 51.0
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 1.2e-98 364.4 384 51.6
arahy.Tifrunner.gnm1.ann1.IV6A0X Arachis hypogaea HOM05D006967 ORTHO05D008692 3.6e-98 362.8 392 50.0
arahy.Tifrunner.gnm1.ann1.S5Z5QJ Arachis hypogaea HOM05D006967 ORTHO05D008692 3.6e-98 362.8 392 50.0
AUR62028614 Chenopodium quinoa HOM05D006967 ORTHO05D008692 1.0e-97 361.3 437 46.9
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 5.7e-96 355.5 417 46.5
CARHR227130 Cardamine hirsuta HOM05D006967 ORTHO05D008692 9.8e-96 354.8 390 50.0
SHI28117 Sapria himalayana HOM05D006967 ORTHO05D008692 1.7e-95 354.0 390 50.5
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 2.0e-93 347.1 396 47.5
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 8.6e-92 341.7 343 51.9
Nitab4.5_0000217g0010 Nicotiana tabacum HOM05D006967 ORTHO05D008692 5.5e-91 339.0 342 52.0
ATR0737G179 Amborella trichopoda HOM05D006967 ORTHO05D008692 2.3e-89 333.6 393 46.6
VMungo0251G0412 Vigna mungo HOM05D006967 ORTHO05D008692 2.0e-88 330.5 345 50.7
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 2.6e-88 330.1 394 47.2
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 6.3e-87 325.5 392 45.4
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 3.2e-86 323.2 301 54.8
Cpa.g.sc30.57 Carica papaya HOM05D006967 ORTHO05D008692 1.5e-83 314.3 345 49.0
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 2.3e-81 307.0 274 55.8
TAR624G1073 Trochodendron aralioides HOM05D006967 ORTHO05D008692 2.3e-81 307.0 278 57.2
Nitab4.5_0001253g0030 Nicotiana tabacum HOM05D006967 ORTHO05D008692 1.7e-79 300.8 309 50.8
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 6.4e-79 298.9 405 41.5
PGSC0003DMG402016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 1.6e-74 284.3 304 49.3
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 1.1e-73 281.6 385 44.9
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 2.5e-67 260.4 230 56.5
Os01g0654200 Oryza sativa ssp. japonica HOM05D006967 ORTHO05D008692 9.5e-67 258.5 336 43.2
Psat4g112640 Pisum sativum HOM05D006967 ORTHO05D008692 5.4e-62 242.7 229 55.0
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 4.4e-56 223.0 229 50.2
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 7.1e-54 215.7 232 48.7
Ca_22538_v3 Cicer arietinum L. HOM05D006967 ORTHO05D008692 9.9e-48 195.3 281 42.7
Zm00001eb158090 Zea mays HOM05D006967 ORTHO05D008692 2.4e-46 190.7 254 41.3
AagrBONN_evm.TU.Sc2ySwM_368.2736 Anthoceros agrestis HOM05D006967 ORTHO05D008692 3.9e-44 183.3 404 31.9
Potri.001G073200 Populus trichocarpa HOM05D006967 ORTHO05D008692 3.1e-41 173.7 229 47.2
CAN.G40.9 Capsicum annuum HOM05D006967 ORTHO05D008692 6.7e-36 156.0 210 43.8
SMO176G0004 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 3.8e-31 140.2 390 28.7
TAR624G0936 Trochodendron aralioides HOM05D006967 ORTHO05D008692 1.5e-24 118.2 116 55.2
HPP92_007230 Vanilla planifolia HOM05D006967 ORTHO05D008692 1.4e-22 111.7 175 42.3
CBR_g19989 Chara braunii HOM05D006967 ORTHO05D008692 2.5e-14 84.3 152 34.9
Aqoxy4G01848 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 3.0e-12 77.4 98 43.9
CBR_g19993 Chara braunii HOM05D006967 ORTHO05D008692 6.7e-12 76.3 150 33.3
HPP92_007178 Vanilla planifolia HOM05D006967 ORTHO05D008692 1.1e-06 58.9 97 37.1


User provided reference genes

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