Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G112600 Prunus persica HOM05D006866 ORTHO05D008689 1.3e-108 397.9 194 100.0
MD10G1231700 Malus domestica HOM05D006866 ORTHO05D008689 3.2e-86 323.6 174 90.8
FvH4_3g12360 Fragaria vesca HOM05D006866 ORTHO05D008689 2.3e-84 317.4 195 79.5
FAN21G0631 Fragaria x ananassa HOM05D006866 ORTHO05D008689 3.0e-84 317.0 195 80.5
RcHm_v2.0_Chr5g0020151 Rosa chinensis HOM05D006866 ORTHO05D008689 3.9e-84 316.6 195 80.0
CANSAT35G0964 Cannabis sativa HOM05D006866 ORTHO05D008689 1.4e-81 308.1 195 79.5
FAN25G0624 Fragaria x ananassa HOM05D006866 ORTHO05D008689 1.7e-79 301.2 196 78.1
CiPaw.10G064300 Carya illinoinensis HOM05D006866 ORTHO05D008689 3.0e-76 290.4 194 71.6
GSVIVG01012065001 Vitis vinifera HOM05D006866 ORTHO05D008689 5.1e-76 289.7 194 72.7
Cfa000706 Carpinus fangiana HOM05D006866 ORTHO05D008689 3.3e-75 287.0 193 72.5
Haze_06061 Corylus avellana HOM05D006866 ORTHO05D008689 5.7e-75 286.2 193 72.5
Actinidia22399 Actinidia chinensis HOM05D006866 ORTHO05D008689 1.4e-73 281.6 194 70.6
TWI38G1826 Tripterygium wilfordii HOM05D006866 ORTHO05D008689 1.8e-73 281.2 195 69.7
CSS0001165 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 1.2e-72 278.5 193 70.5
CsaV3_1G046260 Cucumis sativus L. HOM05D006866 ORTHO05D008689 8.5e-71 272.3 194 65.5
TAR626G0654 Trochodendron aralioides HOM05D006866 ORTHO05D008689 1.9e-70 271.2 175 71.4
CSS0037136 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 4.2e-70 270.0 193 69.9
Duzib160G0228 Durio zibethinus HOM05D006866 ORTHO05D008689 7.2e-70 269.2 195 66.2
Dinv01379 Davidia involucrata HOM05D006866 ORTHO05D008689 9.3e-70 268.9 174 74.1
Potri.012G123600 Populus trichocarpa HOM05D006866 ORTHO05D008689 7.9e-69 265.8 194 65.5
ClCG01G009530 Citrullus lanatus HOM05D006866 ORTHO05D008689 1.8e-68 264.6 193 64.8
MELO3C021744.2 Cucumis melo HOM05D006866 ORTHO05D008689 1.8e-68 264.6 194 64.9
Gorai.011G048600 Gossypium raimondii HOM05D006866 ORTHO05D008689 1.1e-67 261.9 195 64.1
Lalb_Chr02g0143291 Lupinus albus HOM05D006866 ORTHO05D008689 2.5e-67 260.8 189 65.1
Peaxi162Scf00149g00318 Petunia axillaris HOM05D006866 ORTHO05D008689 3.3e-67 260.4 194 65.5
Thecc.06G143300 Theobroma cacao HOM05D006866 ORTHO05D008689 3.3e-67 260.4 194 63.9
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 5.7e-67 259.6 177 67.8
arahy.Tifrunner.gnm1.ann1.X32MFV Arachis hypogaea HOM05D006866 ORTHO05D008689 7.4e-67 259.2 189 65.6
Sabra12G0093800 Salix brachista HOM05D006866 ORTHO05D008689 1.6e-66 258.1 193 63.7
Glyma.20G109800 Glycine max HOM05D006866 ORTHO05D008689 3.7e-66 256.9 194 64.9
CAN.G149.30 Capsicum annuum HOM05D006866 ORTHO05D008689 4.8e-66 256.5 194 64.9
Nn7g38175 Nelumbo nucifera HOM05D006866 ORTHO05D008689 4.8e-66 256.5 197 61.4
Lj5g0008795 Lotus japonicus HOM05D006866 ORTHO05D008689 8.2e-66 255.8 187 66.3
VMungo0720G0148 Vigna mungo HOM05D006866 ORTHO05D008689 2.4e-65 254.2 189 63.5
Sopen02g017930 Solanum pennellii HOM05D006866 ORTHO05D008689 4.1e-65 253.4 195 64.1
Nitab4.5_0001288g0160 Nicotiana tabacum HOM05D006866 ORTHO05D008689 5.3e-65 253.1 201 63.2
PGSC0003DMG400010422 Solanum tuberosum HOM05D006866 ORTHO05D008689 6.9e-65 252.7 194 63.4
Solyc02g068760.4 Solanum lycopersicum HOM05D006866 ORTHO05D008689 9.1e-65 252.3 193 62.7
AUR62006933 Chenopodium quinoa HOM05D006866 ORTHO05D008689 1.5e-64 251.5 170 65.9
Oeu060351.1 Olea europaea HOM05D006866 ORTHO05D008689 1.5e-64 251.5 184 65.8
Gohir.A10G044500 Gossypium hirsutum HOM05D006866 ORTHO05D008689 2.6e-64 250.8 166 70.5
Ca_25672_v3 Cicer arietinum L. HOM05D006866 ORTHO05D008689 4.5e-64 250.0 194 61.3
QL11p016582 Quercus lobata HOM05D006866 ORTHO05D008689 7.7e-64 249.2 230 55.7
AUR62006935 Chenopodium quinoa HOM05D006866 ORTHO05D008689 1.3e-63 248.4 170 65.3
COL.COLO4_30996 Corchorus olitorius HOM05D006866 ORTHO05D008689 1.3e-63 248.4 186 62.9
TPR.G2424 Trifolium pratense HOM05D006866 ORTHO05D008689 1.3e-63 248.4 189 63.0
Gohir.D10G045700 Gossypium hirsutum HOM05D006866 ORTHO05D008689 1.7e-63 248.1 166 69.3
Aqoxy1G01457 Aquilegia oxysepala HOM05D006866 ORTHO05D008689 2.2e-63 247.7 199 60.3
EL10Ac4g09707 Beta vulgaris HOM05D006866 ORTHO05D008689 2.2e-63 247.7 157 67.5
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 2.9e-63 247.3 193 63.2
Migut.M01983 Erythranthe guttata HOM05D006866 ORTHO05D008689 6.5e-63 246.1 196 61.2
DCAR_001319 Daucus carota HOM05D006866 ORTHO05D008689 1.4e-62 245.0 193 61.7
Cc09_g06040 Coffea canephora HOM05D006866 ORTHO05D008689 1.9e-62 244.6 194 62.4
MBI18_g11481_MAGBIO Magnolia biondii HOM05D006866 ORTHO05D008689 1.9e-62 244.6 195 60.0
Sabra12G0093100 Salix brachista HOM05D006866 ORTHO05D008689 2.5e-62 244.2 157 70.7
Phvul.007G021100 Phaseolus vulgaris HOM05D006866 ORTHO05D008689 9.4e-62 242.3 170 67.6
Aa31LG9G16090 Aethionema arabicum HOM05D006866 ORTHO05D008689 1.2e-61 241.9 162 66.7
BolC4t22960H Brassica oleracea HOM05D006866 ORTHO05D008689 1.6e-61 241.5 163 64.4
BcaB02g09476 Brassica carinata HOM05D006866 ORTHO05D008689 2.1e-61 241.1 163 64.4
THA.LOC104814359 Tarenaya hassleriana HOM05D006866 ORTHO05D008689 2.1e-61 241.1 187 60.4
HanXRQChr09g0258331 Helianthus annuus HOM05D006866 ORTHO05D008689 2.7e-61 240.7 197 59.9
Psat6g231320 Pisum sativum HOM05D006866 ORTHO05D008689 2.7e-61 240.7 194 59.8
C04p13710 Brassica napus HOM05D006866 ORTHO05D008689 3.6e-61 240.4 163 64.4
Thhalv10017758m.g Eutrema salsugineum HOM05D006866 ORTHO05D008689 4.6e-61 240.0 161 65.8
Carub.0004s1681 Capsella rubella HOM05D006866 ORTHO05D008689 6.1e-61 239.6 194 56.7
A05p10610 Brassica napus HOM05D006866 ORTHO05D008689 7.9e-61 239.2 163 63.8
BraA05t20001Z Brassica rapa HOM05D006866 ORTHO05D008689 7.9e-61 239.2 163 63.8
Eucgr.D00981 Eucalyptus grandis HOM05D006866 ORTHO05D008689 7.9e-61 239.2 193 58.5
AL4G31140 Arabidopsis lyrata HOM05D006866 ORTHO05D008689 1.0e-60 238.8 197 57.4
AT2G35130 Arabidopsis thaliana HOM05D006866 ORTHO05D008689 1.0e-60 238.8 166 64.5
Sp4g17360 Schrenkiella parvula HOM05D006866 ORTHO05D008689 1.0e-60 238.8 161 65.2
Medtr1g112240 Medicago truncatula HOM05D006866 ORTHO05D008689 1.8e-60 238.0 170 65.9
ECA232G0121 Erigeron canadensis HOM05D006866 ORTHO05D008689 8.8e-60 235.7 194 58.2
vmacro03523 Vaccinium macrocarpon HOM05D006866 ORTHO05D008689 8.8e-60 235.7 221 56.1
TPR.G2448 Trifolium pratense HOM05D006866 ORTHO05D008689 1.3e-58 231.9 218 53.7
PSO541G3299 Papaver somniferum HOM05D006866 ORTHO05D008689 2.2e-58 231.1 182 61.0
PSO675G2302 Papaver somniferum HOM05D006866 ORTHO05D008689 2.2e-58 231.1 182 60.4
ATR0763G194 Amborella trichopoda HOM05D006866 ORTHO05D008689 1.4e-54 218.4 156 63.5
CDE01G0264 Ceratophyllum demersum HOM05D006866 ORTHO05D008689 5.5e-54 216.5 192 57.8
EL10Ac8g19312 Beta vulgaris HOM05D006866 ORTHO05D008689 1.2e-53 215.3 170 58.2
Zm00001eb233080 Zea mays HOM05D006866 ORTHO05D008689 1.6e-53 214.9 163 62.6
CARHR129270 Cardamine hirsuta HOM05D006866 ORTHO05D008689 2.1e-53 214.5 136 69.1
Nitab4.5_0007533g0010 Nicotiana tabacum HOM05D006866 ORTHO05D008689 6.1e-53 213.0 159 65.4
arahy.Tifrunner.gnm1.ann1.0F554D Arachis hypogaea HOM05D006866 ORTHO05D008689 6.7e-52 209.5 189 56.6
Lsat_1_v5_gn_8_117320 Lactuca sativa HOM05D006866 ORTHO05D008689 4.4e-51 206.8 139 66.9
Sabra12G0093000 Salix brachista HOM05D000009 ORTHO05D000008 3.7e-50 203.8 194 54.1
Cpa.g.sc135.7 Carica papaya HOM05D006866 ORTHO05D008689 1.8e-49 201.4 129 72.9
AUR62000579 Chenopodium quinoa HOM05D006866 ORTHO05D008689 2.1e-45 188.0 158 58.2
Lj2A350T60 Lonicera japonica HOM05D006866 ORTHO05D008689 9.7e-43 179.1 206 49.5
PGR004G0545 Punica granatum HOM05D006866 ORTHO05D008689 2.7e-40 171.0 162 53.7
HanXRQChr10g0279011 Helianthus annuus HOM05D006866 ORTHO05D008689 4.8e-34 150.2 140 54.3
Lsat_1_v5_gn_6_52341 Lactuca sativa HOM05D006866 ORTHO05D008689 4.2e-30 137.1 108 60.2
Os02g0170000 Oryza sativa ssp. japonica HOM05D006866 ORTHO05D008689 5.5e-30 136.7 108 59.3
Manes.13G080558 Manihot esculenta HOM05D006866 ORTHO05D008689 5.2e-28 130.2 75 78.7
Sabra12G0092900 Salix brachista HOM05D000009 ORTHO05D000008 1.3e-26 125.6 130 46.9
SMO165G0132 Selaginella moellendorffii HOM05D006866 ORTHO05D008689 2.8e-21 107.8 130 36.2
AagrBONN_evm.TU.Sc2ySwM_368.1444 Anthoceros agrestis HOM05D006866 ORTHO05D008689 3.6e-21 107.5 128 39.8
Mapoly0002s0014 Marchantia polymorpha HOM05D006866 ORTHO05D008689 2.0e-19 101.7 147 34.0
CSS0019706 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 7.5e-19 99.8 53 81.1
Pp3c16_5890 Physcomitrium patens HOM05D006866 ORTHO05D008689 1.3e-18 99.0 136 36.8
Pp3c6_26210 Physcomitrium patens HOM05D006866 ORTHO05D008689 1.7e-18 98.6 125 37.6
RhsimUnG0235100 Rhododendron simsii HOM05D006866 ORTHO05D008689 3.5e-16 90.9 54 74.1
CAN.G27.8 Capsicum annuum HOM05D006866 ORTHO05D008689 3.3e-14 84.3 70 57.1
Lsat_1_v5_gn_3_50301 Lactuca sativa HOM05D006866 ORTHO05D008689 6.2e-13 80.1 54 61.1
Cfa008015 Carpinus fangiana HOM05D000082 ORTHO05D008689 2.0e-11 75.1 107 46.7
Haze_06053 Corylus avellana HOM05D006866 ORTHO05D008689 1.1e-09 69.3 200 31.5
Lsat_1_v5_gn_8_128381 Lactuca sativa HOM05D006866 ORTHO05D008689 1.1e-09 69.3 46 58.7
CARHR141110 Cardamine hirsuta HOM05D006866 ORTHO05D008689 9.2e-09 66.2 54 51.9
CAN.G1114.2 Capsicum annuum HOM05D006866 ORTHO05D008689 1.2e-08 65.9 41 68.3
Ciclev10015335m.g Citrus clementina HOM05D006866 ORTHO05D008689 2.0e-08 65.1 37 75.7
CARHR180830 Cardamine hirsuta HOM05D006866 ORTHO05D008689 6.6e-07 60.1 50 52.0
Nitab4.5_0000021g0490 Nicotiana tabacum HOM05D006877 ORTHO05D008735 8.6e-07 59.7 66 42.4
Nitab4.5_0011357g0010 Nicotiana tabacum HOM05D006877 ORTHO05D008735 8.6e-07 59.7 66 42.4
MD01G1235800 Malus domestica HOM05D006877 ORTHO05D008735 4.3e-06 57.4 66 40.9
MSTRG.8575 Avicennia marina HOM05D006877 ORTHO05D008735 7.3e-06 56.6 121 29.8
Oeu060385.2 Olea europaea HOM05D006877 ORTHO05D008735 9.5e-06 56.2 66 39.4


User provided reference genes

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