Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 2.3e-75 285.4 140 100.0
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 1.9e-64 249.2 140 80.7
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 5.4e-64 247.7 140 80.7
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 2.3e-62 242.3 140 79.3
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 5.0e-62 241.1 140 79.3
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 6.6e-62 240.7 140 77.9
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 2.3e-59 232.3 148 73.6
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 4.0e-59 231.5 137 76.6
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 3.2e-56 221.9 140 70.7
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 5.4e-56 221.1 153 68.6
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 4.6e-55 218.0 110 81.8
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 1.3e-54 216.5 109 84.4
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 6.6e-54 214.2 140 77.9
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 6.6e-54 214.2 143 69.2
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 8.6e-54 213.8 142 70.4
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 1.5e-53 213.0 110 79.1
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 1.5e-53 213.0 140 72.9
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 3.3e-53 211.8 140 70.7
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 3.3e-53 211.8 110 80.0
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 3.3e-53 211.8 110 79.1
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 4.3e-53 211.5 140 67.9
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 4.3e-53 211.5 144 73.6
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 4.3e-53 211.5 110 78.2
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 1.6e-52 209.5 140 67.1
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 1.6e-52 209.5 140 74.3
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 4.7e-52 208.0 110 78.2
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 6.2e-52 207.6 110 76.4
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 1.1e-51 206.8 140 67.9
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 1.4e-51 206.5 110 76.4
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 2.3e-51 205.7 140 67.9
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 6.8e-51 204.1 140 66.4
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 6.8e-51 204.1 110 76.4
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 1.2e-50 203.4 140 68.6
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 1.5e-50 203.0 105 77.1
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 5.8e-50 201.1 143 67.1
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 5.8e-50 201.1 142 69.0
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 5.8e-50 201.1 140 67.1
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 7.6e-50 200.7 110 76.4
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 9.9e-50 200.3 110 74.5
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 4.9e-49 198.0 140 63.6
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 4.9e-49 198.0 140 63.6
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 4.9e-49 198.0 140 63.6
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 8.4e-49 197.2 103 79.6
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 1.9e-48 196.1 110 73.6
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 2.4e-48 195.7 108 73.1
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 2.4e-48 195.7 108 73.1
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 2.4e-48 195.7 108 73.1
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 2.4e-48 195.7 108 73.1
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 2.4e-48 195.7 108 73.1
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 2.4e-48 195.7 142 62.0
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 3.2e-48 195.3 140 64.3
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 3.2e-48 195.3 140 66.4
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 5.4e-48 194.5 110 72.7
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 5.4e-48 194.5 104 75.0
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 7.1e-48 194.1 108 73.1
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 7.1e-48 194.1 108 73.1
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 9.2e-48 193.7 110 72.7
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 1.2e-47 193.4 110 72.7
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 1.6e-47 193.0 140 63.6
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 1.6e-47 193.0 106 72.6
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 1.6e-47 193.0 106 72.6
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 2.1e-47 192.6 140 62.9
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 6.0e-47 191.0 104 73.1
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 6.0e-47 191.0 104 73.1
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 1.0e-46 190.3 110 70.0
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 1.3e-46 189.9 110 74.5
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 1.7e-46 189.5 139 63.3
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 1.7e-46 189.5 110 70.0
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 1.7e-46 189.5 104 72.1
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 1.7e-46 189.5 102 75.5
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 3.9e-46 188.3 159 61.0
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 5.1e-46 188.0 140 58.6
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 6.6e-46 187.6 91 84.6
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 5.6e-45 184.5 110 72.7
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 4.7e-44 181.4 140 62.1
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 6.2e-44 181.0 131 59.5
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 6.2e-44 181.0 140 62.1
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 6.2e-44 181.0 109 65.1
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 1.1e-43 180.3 152 65.1
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 1.1e-43 180.3 142 57.0
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.4e-43 179.9 110 67.3
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 1.4e-43 179.9 131 61.8
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 1.8e-43 179.5 109 67.9
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 1.8e-43 179.5 109 69.7
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 2.4e-43 179.1 108 65.7
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 5.2e-43 177.9 109 64.2
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 6.9e-43 177.6 140 60.7
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 1.7e-41 172.9 106 70.8
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 2.9e-41 172.2 109 64.2
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 6.4e-41 171.0 175 51.4
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 8.4e-41 170.6 110 67.3
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 1.9e-40 169.5 151 53.0
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 7.1e-40 167.5 150 51.3
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 2.1e-39 166.0 109 59.6
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 2.7e-39 165.6 102 64.7
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 3.9e-38 161.8 78 87.2
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 4.3e-37 158.3 124 58.9
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 9.6e-37 157.1 110 61.8
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 6.2e-36 154.5 78 79.5
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 1.4e-35 153.3 109 52.3
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 1.8e-35 152.9 115 62.6
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 5.3e-35 151.4 110 60.9
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 1.5e-34 149.8 105 71.4
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 9.9e-34 147.1 84 71.4
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 1.3e-33 146.7 90 73.3
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 1.3e-33 146.7 84 75.0
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 4.9e-33 144.8 123 62.6
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 9.3e-32 140.6 149 49.0
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 9.9e-26 120.6 99 59.6
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 6.4e-25 117.9 98 61.2
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 6.4e-25 117.9 98 61.2
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 6.0e-23 111.3 98 57.1
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 3.0e-22 109.0 93 48.4
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 5.1e-22 108.2 68 72.1
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 1.1e-21 107.1 96 54.2
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 9.6e-21 104.0 66 65.2
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 2.8e-20 102.4 66 65.2
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 3.7e-20 102.1 66 65.2
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 3.2e-16 89.0 59 59.3
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 2.0e-10 69.7 38 78.9
arahy.Tifrunner.gnm1.ann1.W44VBU Arachis hypogaea HOM05D043198 ORTHO05D007777 1.8e-06 56.6 32 68.8
Cpa.g.sc27.57 Carica papaya HOM05D006296 ORTHO05D007777 3.0e-06 55.8 35 60.0


User provided reference genes

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