Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G302400 Prunus persica HOM05D004649 ORTHO05D005446 3.5e-239 831.2 424 100.0
MD17G1015500 Malus domestica HOM05D004649 ORTHO05D005446 7.0e-208 727.2 424 87.0
MD09G1015400 Malus domestica HOM05D004649 ORTHO05D005446 1.6e-204 716.1 424 85.4
RcHm_v2.0_Chr2g0174731 Rosa chinensis HOM05D004649 ORTHO05D005446 3.4e-202 708.4 422 85.1
FAN09G0187 Fragaria x ananassa HOM05D004649 ORTHO05D005446 2.1e-196 689.1 422 82.2
FvH4_6g52990 Fragaria vesca HOM05D004649 ORTHO05D005446 1.8e-195 686.0 422 82.0
FAN02G2492 Fragaria x ananassa HOM05D004649 ORTHO05D005446 1.7e-193 679.5 422 81.3
QL02p072453 Quercus lobata HOM05D004649 ORTHO05D005446 2.9e-193 678.7 424 80.9
TWI36G0899 Tripterygium wilfordii HOM05D004649 ORTHO05D005446 2.9e-193 678.7 425 80.5
Dinv33366 Davidia involucrata HOM05D004649 ORTHO05D005446 4.9e-193 677.9 425 80.5
CANSAT64G0679 Cannabis sativa HOM05D004649 ORTHO05D005446 3.5e-191 671.8 425 79.5
CiPaw.04G034500 Carya illinoinensis HOM05D004649 ORTHO05D005446 1.0e-190 670.2 421 81.0
Glyma.05G075400 Glycine max HOM05D004649 ORTHO05D005446 1.3e-190 669.8 425 79.8
Thecc.04G029900 Theobroma cacao HOM05D004649 ORTHO05D005446 2.3e-190 669.1 422 79.1
GSVIVG01001824001 Vitis vinifera HOM05D004649 ORTHO05D005446 1.1e-189 666.8 425 79.1
Gorai.012G088900 Gossypium raimondii HOM05D004649 ORTHO05D005446 1.9e-189 666.0 425 79.1
Gorai.006G040000 Gossypium raimondii HOM05D004649 ORTHO05D005446 9.5e-189 663.7 425 78.4
Gohir.D04G079000 Gossypium hirsutum HOM05D004649 ORTHO05D005446 1.2e-188 663.3 425 78.8
CSS0047966 Camellia sinensis var. sinensis HOM05D004649 ORTHO05D005446 3.6e-188 661.8 425 78.1
Gohir.A05G340700 Gossypium hirsutum HOM05D004649 ORTHO05D005446 6.2e-188 661.0 425 78.4
Dinv25679 Davidia involucrata HOM05D004649 ORTHO05D005446 8.1e-188 660.6 423 79.0
Gohir.A09G034200 Gossypium hirsutum HOM05D004649 ORTHO05D005446 8.1e-188 660.6 425 78.1
CSS0030171 Camellia sinensis var. sinensis HOM05D004649 ORTHO05D005446 1.4e-187 659.8 425 78.1
MELO3C008213.2 Cucumis melo HOM05D004649 ORTHO05D005446 3.1e-187 658.7 425 78.8
Atru.chr6.2512 Acer truncatum HOM05D004649 ORTHO05D005446 4.0e-187 658.3 425 79.1
Duzib264G0046 Durio zibethinus HOM05D004649 ORTHO05D005446 5.2e-187 657.9 425 78.6
Glyma.19G075700 Glycine max HOM05D004649 ORTHO05D005446 6.8e-187 657.5 425 78.6
FAN05G5354 Fragaria x ananassa HOM05D004649 ORTHO05D005446 8.9e-187 657.1 464 74.4
Manes.17G106100 Manihot esculenta HOM05D004649 ORTHO05D005446 5.8e-186 654.4 425 77.4
Ciclev10015345m.g Citrus clementina HOM05D004649 ORTHO05D005446 7.6e-186 654.1 425 78.4
TAR371G0838 Trochodendron aralioides HOM05D004649 ORTHO05D005446 9.9e-186 653.7 425 77.6
arahy.Tifrunner.gnm1.ann1.2RTQ1W Arachis hypogaea HOM05D004649 ORTHO05D005446 3.8e-185 651.7 427 78.5
CsaV3_6G001150 Cucumis sativus L. HOM05D004649 ORTHO05D005446 4.9e-185 651.4 425 77.9
MSTRG.15559 Avicennia marina HOM05D004649 ORTHO05D005446 1.4e-184 649.8 425 76.7
Phvul.004G055700 Phaseolus vulgaris HOM05D004649 ORTHO05D005446 1.4e-184 649.8 425 77.9
CiPaw.03G052200 Carya illinoinensis HOM05D004649 ORTHO05D005446 1.9e-184 649.4 425 78.1
Potri.001G334200 Populus trichocarpa HOM05D004649 ORTHO05D005446 3.0e-182 642.1 425 76.2
VMungo1080G0439 Vigna mungo HOM05D004649 ORTHO05D005446 3.0e-182 642.1 425 77.2
Actinidia05924 Actinidia chinensis HOM05D004649 ORTHO05D005446 3.9e-182 641.7 426 76.3
arahy.Tifrunner.gnm1.ann1.B3K3FC Arachis hypogaea HOM05D004649 ORTHO05D005446 8.7e-182 640.6 434 76.7
Migut.K01446 Erythranthe guttata HOM05D004649 ORTHO05D005446 5.6e-181 637.9 425 75.1
Cc07_g00570 Coffea canephora HOM05D004649 ORTHO05D005446 7.3e-181 637.5 428 75.9
Gohir.D09G035100 Gossypium hirsutum HOM05D004649 ORTHO05D005446 1.2e-180 636.7 425 76.2
Ca_04417_v3 Cicer arietinum L. HOM05D004649 ORTHO05D005446 1.4e-179 633.3 426 75.6
Sopen02g038570 Solanum pennellii HOM05D004649 ORTHO05D005446 1.8e-179 632.9 425 74.1
Nitab4.5_0000559g0250 Nicotiana tabacum HOM05D004649 ORTHO05D005446 2.4e-179 632.5 425 74.1
Solyc02g093920.2 Solanum lycopersicum HOM05D004649 ORTHO05D005446 2.4e-179 632.5 425 74.1
PGR142G2348 Punica granatum HOM05D004649 ORTHO05D005446 5.2e-179 631.3 423 76.4
AUR62033709 Chenopodium quinoa HOM05D004649 ORTHO05D005446 1.2e-178 630.2 425 74.6
AUR62036815 Chenopodium quinoa HOM05D004649 ORTHO05D005446 1.5e-178 629.8 425 75.1
PGSC0003DMG400020222 Solanum tuberosum HOM05D004649 ORTHO05D005446 2.6e-178 629.0 425 73.2
ClCG11G006900 Citrullus lanatus HOM05D004649 ORTHO05D005446 5.8e-178 627.9 459 72.5
Lalb_Chr02g0157841 Lupinus albus HOM05D004649 ORTHO05D005446 5.8e-178 627.9 427 75.6
Nitab4.5_0001031g0020 Nicotiana tabacum HOM05D004649 ORTHO05D005446 7.6e-178 627.5 422 73.5
CAN.G473.77 Capsicum annuum HOM05D004649 ORTHO05D005446 1.7e-177 626.3 425 72.9
COL.COLO4_08766 Corchorus olitorius HOM05D004649 ORTHO05D005446 2.2e-177 625.9 422 77.0
vmacro05936 Vaccinium macrocarpon HOM05D004649 ORTHO05D005446 5.4e-176 621.3 406 75.4
Duzib147G0539 Durio zibethinus HOM05D004649 ORTHO05D005446 7.1e-176 620.9 425 75.5
Rhsim10G0008900 Rhododendron simsii HOM05D004649 ORTHO05D005446 9.3e-176 620.5 426 73.5
Cpa.g.sc130.9 Carica papaya HOM05D004649 ORTHO05D005446 1.6e-175 619.8 426 75.4
TPR.G7524 Trifolium pratense HOM05D004649 ORTHO05D005446 1.6e-175 619.8 427 73.3
Nitab4.5_0006819g0030 Nicotiana tabacum HOM05D004649 ORTHO05D005446 4.6e-175 618.2 432 71.8
Medtr6g023350 Medicago truncatula HOM05D004649 ORTHO05D005446 1.7e-174 616.3 427 72.8
Haze_14832 Corylus avellana HOM05D004649 ORTHO05D005446 3.9e-174 615.1 458 71.6
HanXRQChr14g0450901 Helianthus annuus HOM05D004649 ORTHO05D005446 4.3e-173 611.7 425 71.3
DCAR_011306 Daucus carota HOM05D004649 ORTHO05D005446 2.8e-172 609.0 426 71.1
Lj1g0022023 Lotus japonicus HOM05D004649 ORTHO05D005446 4.8e-172 608.2 427 72.6
Eucgr.I01664 Eucalyptus grandis HOM05D004649 ORTHO05D005446 6.2e-172 607.8 403 76.2
SGA_v2.0_scaffold154G37160 Striga asiatica HOM05D004649 ORTHO05D005446 1.5e-170 603.2 422 71.8
THA.LOC104821114 Tarenaya hassleriana HOM05D004649 ORTHO05D005446 2.6e-170 602.4 423 72.1
Aqoxy5G03494 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 3.4e-170 602.1 429 69.7
Psat1g084880 Pisum sativum HOM05D004649 ORTHO05D005446 3.8e-169 598.6 427 71.4
Sed0002339 Sechium edule HOM05D004649 ORTHO05D005446 3.8e-169 598.6 425 72.5
Lsat_1_v5_gn_2_93941 Lactuca sativa HOM05D004649 ORTHO05D005446 6.4e-169 597.8 424 71.0
CDE09G0552 Ceratophyllum demersum HOM05D004649 ORTHO05D005446 1.6e-164 583.2 422 67.3
ECA238G0199 Erigeron canadensis HOM05D004649 ORTHO05D005446 3.7e-164 582.0 425 69.4
CAN.G1965.13 Capsicum annuum HOM05D004649 ORTHO05D005446 1.4e-163 580.1 423 69.0
HanXRQChr07g0198311 Helianthus annuus HOM05D004649 ORTHO05D005446 9.0e-163 577.4 425 68.2
Nn2g10549 Nelumbo nucifera HOM05D004649 ORTHO05D005446 3.4e-162 575.5 425 69.4
Sp6g29780 Schrenkiella parvula HOM05D004649 ORTHO05D005446 3.8e-161 572.0 426 68.5
Gohir.D10G084700 Gossypium hirsutum HOM05D004649 ORTHO05D005446 6.4e-161 571.2 425 69.6
Aa31LG11G15040 Aethionema arabicum HOM05D004649 ORTHO05D005446 7.1e-160 567.8 426 68.5
BcaNung03172 Brassica carinata HOM05D004649 ORTHO05D005446 9.3e-160 567.4 423 68.1
Thhalv10013615m.g Eutrema salsugineum HOM05D004649 ORTHO05D005446 9.3e-160 567.4 426 67.8
HPP92_017768 Vanilla planifolia HOM05D004649 ORTHO05D005446 7.9e-159 564.3 422 67.3
C02p06640 Brassica napus HOM05D004649 ORTHO05D005446 1.0e-158 563.9 427 67.7
Peaxi162Scf00700g00129 Petunia axillaris HOM05D004649 ORTHO05D005446 1.3e-158 563.5 423 70.2
BcaC03g13505 Brassica carinata HOM05D004649 ORTHO05D005446 3.0e-158 562.4 427 67.7
BolC2t06607H Brassica oleracea HOM05D005656 ORTHO05D005446 3.9e-158 562.0 426 67.6
BraA02t05210Z Brassica rapa HOM05D004649 ORTHO05D005446 5.1e-158 561.6 426 67.1
Lj7C608T4 Lonicera japonica HOM05D004649 ORTHO05D005446 5.1e-158 561.6 425 68.5
A02p02400 Brassica napus HOM05D005656 ORTHO05D007094 6.7e-158 561.2 425 67.1
Gorai.011G092400 Gossypium raimondii HOM05D004649 ORTHO05D005446 8.7e-158 560.8 425 69.4
BcaB08g36970 Brassica carinata HOM05D004649 ORTHO05D005446 5.6e-157 558.1 426 67.6
PSO782G5348 Papaver somniferum HOM05D004649 ORTHO05D005446 2.8e-156 555.8 425 66.6
Peaxi162Scf00420g00411 Petunia axillaris HOM05D004649 ORTHO05D005446 4.8e-156 555.1 433 66.5
Sc07g0004210 Simmondsia chinensis HOM05D004649 ORTHO05D005446 8.2e-156 554.3 383 74.2
A03p06510 Brassica napus HOM05D004649 ORTHO05D005446 5.3e-155 551.6 426 66.9
Nitab4.5_0002887g0140 Nicotiana tabacum HOM05D004649 ORTHO05D005446 6.9e-155 551.2 425 66.8
C09p62910 Brassica napus HOM05D005656 ORTHO05D007094 5.8e-154 548.1 425 65.9
BolC9t59128H Brassica oleracea HOM05D005656 ORTHO05D007094 5.8e-154 548.1 425 65.9
BraA03t09983Z Brassica rapa HOM05D004649 ORTHO05D005446 1.7e-153 546.6 426 66.0
BcaC04g19049 Brassica carinata HOM05D005656 ORTHO05D007094 2.2e-153 546.2 425 65.9
BraA10t44487Z Brassica rapa HOM05D005656 ORTHO05D007094 2.2e-153 546.2 425 65.2
Carub.0006s1245 Capsella rubella HOM05D004649 ORTHO05D005446 6.5e-153 544.7 426 67.1
Hund06757 Selenicereus undatus HOM05D004649 ORTHO05D005446 3.2e-152 542.3 425 68.7
A10p24220 Brassica napus HOM05D005656 ORTHO05D007094 1.2e-151 540.4 425 64.9
AT5G14250 Arabidopsis thaliana HOM05D004649 ORTHO05D005446 6.7e-150 534.6 426 65.5
Os08g0119000 Oryza sativa ssp. japonica HOM05D004649 ORTHO05D005446 1.1e-149 533.9 426 65.3
Sed0000018 Sechium edule HOM05D004649 ORTHO05D005446 1.5e-149 533.5 425 65.9
BcaB01g06336 Brassica carinata HOM05D004649 ORTHO05D005446 2.8e-148 529.3 426 63.8
DCAR_015086 Daucus carota HOM05D004649 ORTHO05D005446 6.3e-148 528.1 422 61.6
AL6G24930 Arabidopsis lyrata HOM05D004649 ORTHO05D005446 1.1e-147 527.3 381 70.6
unitig_52.g17652 Utricularia gibba HOM05D004649 ORTHO05D005446 5.3e-147 525.0 437 64.1
Potri.017G066300 Populus trichocarpa HOM05D004649 ORTHO05D005446 6.9e-147 524.6 324 80.2
Zm00001eb261210 Zea mays HOM05D004649 ORTHO05D005446 6.9e-147 524.6 425 63.8
Manes.15G158000 Manihot esculenta HOM05D004649 ORTHO05D005446 3.4e-146 522.3 312 84.0
ATR0124G048 Amborella trichopoda HOM05D004649 ORTHO05D005446 1.9e-144 516.5 360 70.3
CARHR199090 Cardamine hirsuta HOM05D004649 ORTHO05D005446 3.2e-144 515.8 386 68.4
Aqoxy3G01472 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 1.4e-139 500.4 426 62.2
CDE02G4363 Ceratophyllum demersum HOM05D004649 ORTHO05D005446 2.0e-138 496.5 444 59.5
Pp3c11_20060 Physcomitrium patens HOM05D004649 ORTHO05D005446 2.0e-133 479.9 427 56.9
Mapoly0005s0216 Marchantia polymorpha HOM05D004649 ORTHO05D005446 7.4e-133 478.0 427 57.6
SMO351G0195 Selaginella moellendorffii HOM05D004649 ORTHO05D005446 1.4e-131 473.8 424 56.6
AagrBONN_evm.TU.Sc2ySwM_368.1057 Anthoceros agrestis HOM05D004649 ORTHO05D005446 1.8e-126 456.8 451 53.2
EL10As11g23981 Beta vulgaris HOM05D004649 ORTHO05D005446 3.7e-124 449.1 388 63.1
CBR_g75710 Chara braunii HOM05D004649 ORTHO05D005446 2.6e-117 426.4 430 53.0
PSO017G3153 Papaver somniferum HOM05D004649 ORTHO05D005446 5.7e-117 425.2 395 59.0
Sabra16G0215300 Salix brachista HOM05D004649 ORTHO05D005446 6.1e-111 405.2 241 85.1
Nn3g16527 Nelumbo nucifera HOM05D004649 ORTHO05D005446 3.0e-110 402.9 284 69.7
Hma1.2p1_0571F.1_g180750 Hydrangea macrophylla HOM05D004649 ORTHO05D005446 1.6e-106 390.6 239 82.8
Actinidia36180 Actinidia chinensis HOM05D004649 ORTHO05D005446 1.9e-104 383.6 429 54.3
BcaB01g05123 Brassica carinata HOM05D004649 ORTHO05D005446 3.3e-104 382.9 355 58.9
C03p07530 Brassica napus HOM05D004649 ORTHO05D005446 3.6e-103 379.4 359 58.8
Zm00001eb173540 Zea mays HOM05D004649 ORTHO05D005446 1.2e-101 374.4 324 61.1
Cre16.g671100 Chlamydomonas reinhardtii HOM05D004649 ORTHO05D005446 2.4e-75 287.0 429 38.5
Gohir.A01G185660 Gossypium hirsutum HOM05D004649 ORTHO05D005446 4.6e-74 282.7 214 69.2
C09p61600 Brassica napus HOM05D004649 ORTHO05D005446 7.6e-69 265.4 325 48.0
PRCOL_00002547 Prasinoderma coloniale HOM05D004649 ORTHO05D005446 4.0e-62 243.0 350 39.1
CAN.G473.64 Capsicum annuum HOM05D004649 ORTHO05D005446 1.9e-59 234.2 190 66.3
BcaC04g18970 Brassica carinata HOM05D004649 ORTHO05D005446 5.4e-59 232.6 359 42.3
A03p07400 Brassica napus HOM05D004649 ORTHO05D005446 2.5e-56 223.8 194 61.9
BolC9t59028H Brassica oleracea HOM05D004649 ORTHO05D005446 2.2e-52 210.7 305 43.3
BraA03t10063Z Brassica rapa HOM05D004649 ORTHO05D005446 3.5e-50 203.4 194 56.7
SEGI_26946 Sequoiadendron giganteum HOM05D004649 ORTHO05D005446 2.1e-47 194.1 140 67.1
Sabra07G0059200 Salix brachista HOM05D004649 ORTHO05D005446 9.9e-45 185.3 251 46.2
MCO12G022 Micromonas commoda HOM05D004649 ORTHO05D005446 6.7e-41 172.6 336 32.1
FAN09G3197 Fragaria x ananassa HOM05D004649 ORTHO05D005446 1.0e-33 148.7 122 63.9
Sabra07G0059100 Salix brachista HOM05D005682 ORTHO05D007050 1.8e-33 147.9 188 46.3
BolC3t13254H Brassica oleracea HOM05D004649 ORTHO05D005446 6.3e-31 139.4 105 70.5
Duzib268G1750 Durio zibethinus HOM05D004649 ORTHO05D005446 7.9e-26 122.5 125 52.0
QL12p000006 Quercus lobata HOM05D004649 ORTHO05D005446 1.7e-23 114.8 78 67.9
QL12p000135 Quercus lobata HOM05D004649 ORTHO05D005446 1.7e-23 114.8 78 67.9
BcaB08g36975 Brassica carinata HOM05D005656 ORTHO05D007094 3.7e-23 113.6 76 72.4
Oeu042415.1 Olea europaea HOM05D004649 ORTHO05D005446 3.1e-14 84.0 48 83.3
Aqoxy5G03476 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 9.1e-14 82.4 120 44.2
FvH4_2g01181 Fragaria vesca HOM05D000564 ORTHO05D005446 1.0e-12 79.0 115 47.8
Hma1.2p1_0571F.1_g180740 Hydrangea macrophylla HOM05D004649 ORTHO05D005446 5.5e-11 73.2 62 59.7
ECA232G4246 Erigeron canadensis HOM05D004649 ORTHO05D005446 3.6e-10 70.5 75 52.0
Thhalv10007479m.g Eutrema salsugineum HOM05D002716 ORTHO05D003324 4.7e-10 70.1 202 27.2
AL2G36010 Arabidopsis lyrata HOM05D002716 ORTHO05D003324 8.0e-10 69.3 202 27.7
A07p41500 Brassica napus HOM05D002716 ORTHO05D003324 8.0e-10 69.3 202 27.7
BraA07t31682Z Brassica rapa HOM05D002716 ORTHO05D003324 8.0e-10 69.3 202 27.7
Sp1g17970 Schrenkiella parvula HOM05D002716 ORTHO05D003324 8.0e-10 69.3 202 27.2
BcaC08g47308 Brassica carinata HOM05D002716 ORTHO05D003324 1.0e-09 68.9 202 27.7
C06p49910 Brassica napus HOM05D002716 ORTHO05D003324 1.0e-09 68.9 202 27.7
BolC6t40029H Brassica oleracea HOM05D002716 ORTHO05D003324 1.0e-09 68.9 202 27.7
Carub.0001s1973 Capsella rubella HOM05D002716 ORTHO05D003324 1.0e-09 68.9 202 27.2
CARHR020700 Cardamine hirsuta HOM05D002716 ORTHO05D003324 1.0e-09 68.9 202 27.2
AT1G20200 Arabidopsis thaliana HOM05D002716 ORTHO05D003324 1.4e-09 68.6 202 27.2
BcaB03g12876 Brassica carinata HOM05D002716 ORTHO05D003324 1.4e-09 68.6 202 27.2
Carub.0002s2288 Capsella rubella HOM05D002716 ORTHO05D003324 1.4e-09 68.6 202 27.2
AL1G33040 Arabidopsis lyrata HOM05D002716 ORTHO05D003324 1.8e-09 68.2 202 27.2
AT1G75990 Arabidopsis thaliana HOM05D002716 ORTHO05D003324 1.8e-09 68.2 202 27.2
CARHR069530 Cardamine hirsuta HOM05D002716 ORTHO05D003324 6.7e-09 66.2 202 26.2
Sp5g31110 Schrenkiella parvula HOM05D002716 ORTHO05D003324 6.7e-09 66.2 202 26.2
FAN14G5770 Fragaria x ananassa HOM05D004649 ORTHO05D005446 1.1e-08 65.5 48 60.4
BcaC07g39026 Brassica carinata HOM05D002716 ORTHO05D003324 1.5e-08 65.1 202 26.2
C03p08440 Brassica napus HOM05D002468 ORTHO05D005371 1.5e-08 65.1 49 63.3
C08p20020 Brassica napus HOM05D002716 ORTHO05D003324 1.5e-08 65.1 202 26.2
BolC3t13348H Brassica oleracea HOM05D002468 ORTHO05D005371 1.5e-08 65.1 49 63.3
BolC8t49637H Brassica oleracea HOM05D002716 ORTHO05D003324 1.5e-08 65.1 202 26.2
FvH4_6g52500 Fragaria vesca HOM05D004649 ORTHO05D005446 2.6e-08 64.3 48 58.3
Ah.00g000740 Amaranthus hybridus HOM05D002716 ORTHO05D003324 1.3e-07 62.0 134 26.9
Sabra02G0014100 Salix brachista HOM05D002716 ORTHO05D003324 2.8e-07 60.8 211 25.1


User provided reference genes

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