Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G293800 Prunus persica HOM05D004929 ORTHO05D006492 9.3e-209 729.9 362 100.0
MD09G1023000 Malus domestica HOM05D004929 ORTHO05D006492 2.4e-188 662.1 364 90.4
MD17G1022300 Malus domestica HOM05D004929 ORTHO05D006492 7.9e-184 647.1 364 88.5
RcHm_v2.0_Chr2g0173281 Rosa chinensis HOM05D004929 ORTHO05D006492 1.4e-180 636.3 359 88.9
FvH4_6g51800 Fragaria vesca HOM05D004929 ORTHO05D006492 2.0e-179 632.5 358 87.4
FAN09G2944 Fragaria x ananassa HOM05D004929 ORTHO05D006492 5.9e-179 630.9 358 87.4
FAN14G2766 Fragaria x ananassa HOM05D004929 ORTHO05D006492 1.3e-178 629.8 358 86.9
FAN05G4087 Fragaria x ananassa HOM05D004929 ORTHO05D006492 1.0e-175 620.2 358 86.0
FAN02G0047 Fragaria x ananassa HOM05D004929 ORTHO05D006492 1.1e-174 616.7 370 83.5
Nn8g40033 Nelumbo nucifera HOM05D004929 ORTHO05D006492 1.8e-172 609.4 349 83.7
Thecc.04G019500 Theobroma cacao HOM05D004929 ORTHO05D006492 1.2e-171 606.7 357 83.2
Cfa007339 Carpinus fangiana HOM05D004929 ORTHO05D006492 1.7e-170 602.8 352 83.2
Haze_14758 Corylus avellana HOM05D004929 ORTHO05D006492 1.7e-170 602.8 355 83.1
Manes.15G151900 Manihot esculenta HOM05D004929 ORTHO05D006492 5.0e-170 601.3 353 83.3
TAR633G2310 Trochodendron aralioides HOM05D004929 ORTHO05D006492 9.4e-169 597.0 347 83.0
Dinv25726 Davidia involucrata HOM05D004929 ORTHO05D006492 2.1e-168 595.9 351 82.3
MELO3C021592.2 Cucumis melo HOM05D004929 ORTHO05D006492 1.4e-167 593.2 360 79.7
CsaV3_5G027030 Cucumis sativus L. HOM05D004929 ORTHO05D006492 2.3e-167 592.4 358 80.2
ClCG09G019380 Citrullus lanatus HOM05D004929 ORTHO05D006492 5.1e-167 591.3 357 79.8
Duzib147G0164 Durio zibethinus HOM05D004929 ORTHO05D006492 5.1e-167 591.3 359 80.2
CiPaw.04G029600 Carya illinoinensis HOM05D004929 ORTHO05D006492 6.7e-167 590.9 351 81.5
Potri.001G343400 Populus trichocarpa HOM05D004929 ORTHO05D006492 1.5e-166 589.7 359 78.0
Sabra16G0222700 Salix brachista HOM05D004929 ORTHO05D006492 7.4e-166 587.4 347 79.8
GSVIVG01032385001 Vitis vinifera HOM05D004929 ORTHO05D006492 7.4e-166 587.4 354 80.8
CiPaw.03G045500 Carya illinoinensis HOM05D004929 ORTHO05D006492 1.7e-165 586.3 346 82.1
Sed0027438 Sechium edule HOM05D004929 ORTHO05D006492 2.8e-165 585.5 355 80.0
CANSAT64G1903 Cannabis sativa HOM05D004929 ORTHO05D006492 3.7e-165 585.1 351 80.3
Cc09_g04510 Coffea canephora HOM05D004929 ORTHO05D006492 4.8e-165 584.7 352 80.1
PGR142G3088 Punica granatum HOM05D004929 ORTHO05D006492 4.8e-165 584.7 353 80.5
Ciclev10015593m.g Citrus clementina HOM05D004929 ORTHO05D006492 8.2e-165 583.9 350 78.6
SalBow7G3047 Salvia bowleyana HOM05D004929 ORTHO05D006492 8.2e-165 583.9 349 80.5
PSO384G0906 Papaver somniferum HOM05D004929 ORTHO05D006492 1.1e-164 583.6 349 79.9
PSO699G0033 Papaver somniferum HOM05D004929 ORTHO05D006492 1.4e-164 583.2 348 80.2
QL02p074005 Quercus lobata HOM05D004929 ORTHO05D006492 3.1e-164 582.0 357 80.1
Aqoxy5G00914 Aquilegia oxysepala HOM05D004929 ORTHO05D006492 5.3e-164 581.3 347 80.1
Lju41A43T26 Lonicera japonica HOM05D004929 ORTHO05D006492 6.9e-164 580.9 360 78.3
Peaxi162Scf03028g00012 Petunia axillaris HOM05D004929 ORTHO05D006492 6.9e-164 580.9 347 81.8
Nitab4.5_0001860g0030 Nicotiana tabacum HOM05D004929 ORTHO05D006492 1.2e-163 580.1 353 79.6
Sed0020215 Sechium edule HOM05D004929 ORTHO05D006492 2.0e-163 579.3 358 78.8
Peaxi162Scf00129g01650 Petunia axillaris HOM05D004929 ORTHO05D006492 2.6e-163 578.9 347 81.6
Actinidia05982 Actinidia chinensis HOM05D004929 ORTHO05D006492 3.4e-163 578.6 350 78.3
Solyc02g093440.4 Solanum lycopersicum HOM05D004929 ORTHO05D006492 3.4e-163 578.6 349 81.1
Rhsim10G0014700 Rhododendron simsii HOM05D004929 ORTHO05D006492 5.9e-163 577.8 350 79.7
Gohir.D09G029800 Gossypium hirsutum HOM05D004929 ORTHO05D006492 1.0e-162 577.0 349 79.7
THA.LOC104821096 Tarenaya hassleriana HOM05D004929 ORTHO05D006492 1.3e-162 576.6 350 79.7
CARHR075280 Cardamine hirsuta HOM05D004929 ORTHO05D006492 1.7e-162 576.2 353 77.9
Gorai.006G034800 Gossypium raimondii HOM05D004929 ORTHO05D006492 2.2e-162 575.9 349 79.7
vmacro05876 Vaccinium macrocarpon HOM05D004929 ORTHO05D006492 3.8e-162 575.1 350 78.6
Sopen02g038230 Solanum pennellii HOM05D004929 ORTHO05D006492 8.5e-162 573.9 349 80.8
Gohir.A09G030100 Gossypium hirsutum HOM05D004929 ORTHO05D006492 1.1e-161 573.5 349 78.8
CAN.G473.20 Capsicum annuum HOM05D004929 ORTHO05D006492 1.9e-161 572.8 347 80.1
AT3G01640 Arabidopsis thaliana HOM05D004929 ORTHO05D006492 4.2e-161 571.6 358 76.8
C03p39500 Brassica napus HOM05D004929 ORTHO05D006492 7.2e-161 570.9 357 75.9
BraA03t12414Z Brassica rapa HOM05D004929 ORTHO05D006492 7.2e-161 570.9 358 76.3
Thhalv10020980m.g Eutrema salsugineum HOM05D004929 ORTHO05D006492 7.2e-161 570.9 353 76.8
Aa31LG5G10780 Aethionema arabicum HOM05D004929 ORTHO05D006492 9.4e-161 570.5 352 78.4
Aqoxy4G03095 Aquilegia oxysepala HOM05D004929 ORTHO05D006492 1.2e-160 570.1 352 77.6
Migut.K01411 Erythranthe guttata HOM05D004929 ORTHO05D006492 2.1e-160 569.3 355 77.2
BolC3t16218H Brassica oleracea HOM05D004929 ORTHO05D006492 2.7e-160 568.9 357 75.6
AL3G10510 Arabidopsis lyrata HOM05D004929 ORTHO05D006492 4.7e-160 568.2 353 76.5
BcaC01g04530 Brassica carinata HOM05D004929 ORTHO05D006492 4.7e-160 568.2 357 75.1
PGSC0003DMG400012608 Solanum tuberosum HOM05D004929 ORTHO05D006492 6.1e-160 567.8 352 79.0
A03p32440 Brassica napus HOM05D004929 ORTHO05D006492 7.9e-160 567.4 358 76.0
Cpa.g.sc108.76 Carica papaya HOM05D003450 ORTHO05D004150 2.3e-159 565.8 357 73.9
Peaxi162Scf00080g01316 Petunia axillaris HOM05D004929 ORTHO05D005557 2.3e-159 565.8 350 78.3
MSTRG.3138 Avicennia marina HOM05D004929 ORTHO05D006492 3.0e-159 565.5 349 77.9
Thhalv10013912m.g Eutrema salsugineum HOM05D004929 ORTHO05D006492 3.9e-159 565.1 350 76.3
TWI56G0780 Tripterygium wilfordii HOM05D004929 ORTHO05D006492 8.8e-159 563.9 360 75.3
Sp3g00410 Schrenkiella parvula HOM05D004929 ORTHO05D006492 3.3e-158 562.0 350 76.9
Hund23289 Selenicereus undatus HOM05D004929 ORTHO05D006492 9.7e-158 560.5 347 77.2
AL6G25200 Arabidopsis lyrata HOM05D004929 ORTHO05D006492 3.7e-157 558.5 351 76.1
CARHR198840 Cardamine hirsuta HOM05D004929 ORTHO05D006492 3.7e-157 558.5 354 75.1
arahy.Tifrunner.gnm1.ann1.FEY4ZS Arachis hypogaea HOM05D004929 ORTHO05D006492 6.3e-157 557.8 351 77.8
arahy.Tifrunner.gnm1.ann1.NF5K9F Arachis hypogaea HOM05D004929 ORTHO05D006492 6.3e-157 557.8 351 77.8
TWI12G0632 Tripterygium wilfordii HOM05D004929 ORTHO05D006492 1.1e-156 557.0 358 75.7
Carub.0006s1265 Capsella rubella HOM05D004929 ORTHO05D006492 7.0e-156 554.3 349 76.2
Lsat_1_v5_gn_0_18301 Lactuca sativa HOM05D004929 ORTHO05D006492 7.0e-156 554.3 351 75.2
MBI05_g22077_MAGBIO Magnolia biondii HOM05D004929 ORTHO05D006492 1.2e-155 553.5 349 77.7
Duzib264G0638 Durio zibethinus HOM05D004929 ORTHO05D006492 1.6e-155 553.1 393 72.0
AT5G14470 Arabidopsis thaliana HOM05D004929 ORTHO05D006492 2.0e-155 552.7 350 75.4
BraA10t44472Z Brassica rapa HOM05D004929 ORTHO05D006492 2.6e-155 552.4 347 75.8
EL10Ac6g14097 Beta vulgaris HOM05D004929 ORTHO05D006492 7.7e-155 550.8 348 75.0
HanXRQChr17g0548641 Helianthus annuus HOM05D004929 ORTHO05D006492 2.2e-154 549.3 347 76.9
ECA246G1179 Erigeron canadensis HOM05D004929 ORTHO05D006492 2.9e-154 548.9 362 74.9
Glyma.05G002500 Glycine max HOM05D004929 ORTHO05D006492 3.8e-154 548.5 347 75.8
Carub.0003s0042 Capsella rubella HOM05D004929 ORTHO05D006492 5.0e-154 548.1 351 74.4
HanXRQChr17g0548651 Helianthus annuus HOM05D004929 ORTHO05D006492 6.5e-154 547.7 343 77.3
Phvul.004G004700 Phaseolus vulgaris HOM05D004929 ORTHO05D006492 6.5e-154 547.7 346 76.9
DCAR_021732 Daucus carota HOM05D004929 ORTHO05D006492 8.5e-154 547.4 337 77.4
TPR.G31950 Trifolium pratense HOM05D004929 ORTHO05D006492 2.7e-152 542.3 348 76.4
Lalb_Chr06g0176621 Lupinus albus HOM05D004929 ORTHO05D006492 4.7e-152 541.6 347 74.9
VMungo0464G1388 Vigna mungo HOM05D004929 ORTHO05D006492 6.1e-152 541.2 346 76.6
Ah.03g137000 Amaranthus hybridus HOM05D004929 ORTHO05D006492 3.0e-151 538.9 353 72.2
BcaB08g36997 Brassica carinata HOM05D004929 ORTHO05D006492 6.7e-151 537.7 351 74.1
HPP92_015407 Vanilla planifolia HOM05D004929 ORTHO05D006492 1.2e-150 537.0 351 72.9
Medtr6g004430 Medicago truncatula HOM05D004929 ORTHO05D006492 7.5e-150 534.3 347 75.5
Ca_04143_v3 Cicer arietinum L. HOM05D004929 ORTHO05D006492 4.8e-149 531.6 346 75.4
AUR62008872 Chenopodium quinoa HOM05D004929 ORTHO05D006492 1.1e-148 530.4 348 72.7
Lj2g0024676 Lotus japonicus HOM05D004929 ORTHO05D006492 1.4e-148 530.0 347 74.6
Zm00001eb025800 Zea mays HOM05D004929 ORTHO05D006492 3.1e-148 528.9 354 72.0
Os11g0217300 Oryza sativa ssp. japonica HOM05D004929 ORTHO05D006492 1.7e-146 523.1 340 74.4
AUR62031837 Chenopodium quinoa HOM05D004929 ORTHO05D006492 3.8e-146 521.9 388 65.5
BcaC04g19032 Brassica carinata HOM05D004929 ORTHO05D006492 7.2e-145 517.7 351 72.9
Oeu018151.1 Olea europaea HOM05D004929 ORTHO05D006492 1.6e-144 516.5 348 73.9
ATR0827G043 Amborella trichopoda HOM05D004929 ORTHO05D006492 2.1e-144 516.2 362 70.7
arahy.Tifrunner.gnm1.ann1.BJ3QP1 Arachis hypogaea HOM05D004929 ORTHO05D006492 3.6e-144 515.4 318 79.6
BcaB08g36995 Brassica carinata HOM05D004929 ORTHO05D006492 3.4e-142 508.8 357 71.4
COL.COLO4_29172 Corchorus olitorius HOM05D004929 ORTHO05D006492 6.8e-135 484.6 353 69.1
SHI00354 Sapria himalayana HOM05D004929 ORTHO05D006492 3.4e-134 482.3 341 68.3
Eucgr.I01731 Eucalyptus grandis HOM05D004929 ORTHO05D006492 9.8e-134 480.7 287 81.9
A10p24090 Brassica napus HOM05D004929 ORTHO05D006492 3.5e-131 472.2 350 66.3
Dinv33427 Davidia involucrata HOM05D004929 ORTHO05D006492 6.8e-127 458.0 274 80.3
SMO145G0043 Selaginella moellendorffii HOM05D004929 ORTHO05D006492 3.4e-126 455.7 333 66.1
SGA_v2.0_scaffold30G12409 Striga asiatica HOM05D004929 ORTHO05D006492 5.7e-126 454.9 274 80.7
Nitab4.5_0006683g0060 Nicotiana tabacum HOM05D004929 ORTHO05D006492 3.7e-125 452.2 354 66.4
Sc03g0007290 Simmondsia chinensis HOM05D004929 ORTHO05D006492 3.2e-124 449.1 269 79.2
Psat1g053480 Pisum sativum HOM05D004929 ORTHO05D006492 5.4e-116 421.8 268 76.9
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 4.6e-115 418.7 268 75.4
HPP92_026990 Vanilla planifolia HOM05D004929 ORTHO05D006492 1.3e-114 417.2 269 74.3
Mapoly0023s0058 Marchantia polymorpha HOM05D004929 ORTHO05D006492 8.6e-114 414.5 347 60.2
AagrBONN_evm.TU.Sc2ySwM_228.449 Anthoceros agrestis HOM05D000718 ORTHO05D002712 1.6e-112 410.2 330 61.2
CBR_g3618 Chara braunii HOM05D004929 ORTHO05D006492 8.9e-111 404.4 351 59.0
Atru.chr6.2430 Acer truncatum HOM05D004929 ORTHO05D006492 4.9e-109 398.7 238 79.8
SGA_v2.0_scaffold47G17516 Striga asiatica HOM05D004929 ORTHO05D006492 3.0e-106 389.4 332 62.3
ATR0681G379 Amborella trichopoda HOM05D004929 ORTHO05D006492 3.4e-102 375.9 247 74.9
Pp3c22_9380 Physcomitrium patens HOM05D004929 ORTHO05D006492 7.1e-100 368.2 267 64.8
BolC9t59108H Brassica oleracea HOM05D004929 ORTHO05D006492 1.6e-99 367.1 359 55.4
SHI25478 Sapria himalayana HOM05D004929 ORTHO05D006492 4.6e-99 365.5 283 64.3
C09p62710 Brassica napus HOM05D004929 ORTHO05D006492 1.0e-98 364.4 350 55.4
Cre02.g107600 Chlamydomonas reinhardtii HOM05D004929 ORTHO05D006492 1.7e-93 347.1 356 53.7
Nitab4.5_0000040g0670 Nicotiana tabacum HOM05D004929 ORTHO05D006492 4.2e-92 342.4 355 53.8
CDE07G0337 Ceratophyllum demersum HOM05D004929 ORTHO05D006492 7.8e-91 338.2 209 74.2
MCO09G795 Micromonas commoda HOM05D004929 ORTHO05D006492 1.7e-85 320.5 350 50.0
PRCOL_00005101 Prasinoderma coloniale HOM05D004929 ORTHO05D006492 3.9e-82 309.3 346 50.0
Nitab4.5_0001550g0030 Nicotiana tabacum HOM05D004929 ORTHO05D006492 2.5e-81 306.6 235 68.9
Oeu033729.3 Olea europaea HOM05D004929 ORTHO05D006492 5.3e-71 272.3 209 68.4
BcaB08g36982 Brassica carinata HOM05D004929 ORTHO05D006492 6.7e-66 255.4 167 73.7
MBI05_g01825_MAGBIO Magnolia biondii HOM05D004929 ORTHO05D006492 1.2e-62 244.6 215 59.5
BolC9t59344H Brassica oleracea HOM05D004929 ORTHO05D006492 8.2e-56 221.9 196 59.2
MSTRG.3285 Avicennia marina HOM05D004929 ORTHO05D006492 7.2e-52 208.8 131 77.1
Atru.chr6.2429 Acer truncatum HOM05D004929 ORTHO05D006492 7.9e-51 205.3 123 77.2
CDE07G1161 Ceratophyllum demersum HOM05D004929 ORTHO05D043891 5.0e-37 159.5 114 68.4
A10p26090 Brassica napus HOM05D004929 ORTHO05D006492 3.5e-30 136.7 189 45.0
MD17G1022500 Malus domestica HOM05D004929 ORTHO05D006492 1.6e-27 127.9 85 74.1
BcaNung06761 Brassica carinata HOM05D004929 ORTHO05D006492 2.2e-24 117.5 70 77.1
Sp6g29550 Schrenkiella parvula HOM05D004929 ORTHO05D043891 8.6e-21 105.5 66 75.8
Sopen02g038030 Solanum pennellii HOM05D004929 ORTHO05D006492 8.9e-18 95.5 68 64.7
arahy.Tifrunner.gnm1.ann1.6CI6DX Arachis hypogaea HOM05D004929 ORTHO05D031499 7.5e-09 65.9 44 63.6
Glyma.19G002700 Glycine max HOM05D004929 ORTHO05D215243 1.3e-08 65.1 79 49.4
arahy.Tifrunner.gnm1.ann1.XQCE19 Arachis hypogaea HOM05D004929 ORTHO05D031499 4.9e-08 63.2 43 60.5
CAN.G1057.11 Capsicum annuum HOM05D004929 ORTHO05D115892 1.4e-07 61.6 107 35.5


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