Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G278500 Prunus persica HOM05D005035 ORTHO05D006141 1.8e-81 305.8 147 100.0
MD09G1039900 Malus domestica HOM05D005035 ORTHO05D006141 5.5e-75 284.3 147 93.2
FvH4_6g50060 Fragaria vesca HOM05D005035 ORTHO05D006141 3.9e-73 278.1 147 90.5
MD17G1040500 Malus domestica HOM05D005035 ORTHO05D006141 1.1e-72 276.6 147 91.2
RcHm_v2.0_Chr2g0170331 Rosa chinensis HOM05D005035 ORTHO05D006141 7.4e-72 273.9 147 89.1
Cfa007472 Carpinus fangiana HOM05D005035 ORTHO05D006141 3.7e-71 271.6 148 89.2
FAN05G0554 Fragaria x ananassa HOM05D005035 ORTHO05D006141 1.1e-70 270.0 146 88.4
CiPaw.03G034300 Carya illinoinensis HOM05D005035 ORTHO05D006141 2.9e-68 261.9 148 86.5
CSS0048749 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 5.5e-67 257.7 148 85.1
FAN09G0974 Fragaria x ananassa HOM05D005035 ORTHO05D006141 1.6e-66 256.1 138 87.0
FAN14G3542 Fragaria x ananassa HOM05D005035 ORTHO05D006141 1.6e-66 256.1 138 87.0
GSVIVG01032540001 Vitis vinifera HOM05D005035 ORTHO05D006141 3.5e-66 255.0 147 85.0
Lj2g0024232 Lotus japonicus HOM05D005035 ORTHO05D006141 4.6e-66 254.6 142 83.8
TAR484G0003 Trochodendron aralioides HOM05D005035 ORTHO05D006141 1.3e-65 253.1 145 84.8
TAR629G3150 Trochodendron aralioides HOM05D005035 ORTHO05D006141 1.3e-65 253.1 145 84.8
FAN02G1276 Fragaria x ananassa HOM05D005035 ORTHO05D006141 1.8e-65 252.7 138 86.2
TAR371G0568 Trochodendron aralioides HOM05D005035 ORTHO05D006141 2.3e-65 252.3 145 84.1
CsaV3_5G037480 Cucumis sativus L. HOM05D005035 ORTHO05D006141 3.9e-65 251.5 143 81.8
TWI56G1217 Tripterygium wilfordii HOM05D005035 ORTHO05D006141 1.1e-64 250.0 136 85.3
MELO3C021510.2 Cucumis melo HOM05D005035 ORTHO05D006141 1.5e-64 249.6 143 81.8
Glyma.13G069100 Glycine max HOM05D005035 ORTHO05D006141 1.9e-64 249.2 142 81.7
TWI36G0797 Tripterygium wilfordii HOM05D005035 ORTHO05D006141 2.5e-64 248.8 136 84.6
Actinidia06042 Actinidia chinensis HOM05D005035 ORTHO05D006141 3.3e-64 248.4 148 83.1
TPR.G31460 Trifolium pratense HOM05D005035 ORTHO05D006141 3.3e-64 248.4 142 82.4
Medtr6g008220 Medicago truncatula HOM05D005035 ORTHO05D006141 4.3e-64 248.1 142 83.1
CANSAT21G0423 Cannabis sativa HOM05D005035 ORTHO05D006141 7.4e-64 247.3 147 81.6
Ca_04227_v3 Cicer arietinum L. HOM05D005035 ORTHO05D006141 7.4e-64 247.3 142 82.4
Lalb_Chr21g0319261 Lupinus albus HOM05D005035 ORTHO05D006141 7.4e-64 247.3 146 80.8
Glyma.19G013800 Glycine max HOM05D005035 ORTHO05D006141 9.7e-64 246.9 142 81.0
Nn4g22913 Nelumbo nucifera HOM05D005035 ORTHO05D006141 1.3e-63 246.5 147 82.3
vmacro05790 Vaccinium macrocarpon HOM05D005035 ORTHO05D006141 1.6e-63 246.1 139 83.5
Gohir.A07G217600 Gossypium hirsutum HOM05D005035 ORTHO05D006141 2.2e-63 245.7 147 80.3
Gohir.D07G224700 Gossypium hirsutum HOM05D005035 ORTHO05D006141 6.3e-63 244.2 147 79.6
Aqoxy3G00882 Aquilegia oxysepala HOM05D005035 ORTHO05D006141 8.2e-63 243.8 140 83.6
PGR083G2790 Punica granatum HOM05D005035 ORTHO05D006141 1.1e-62 243.4 146 80.1
Sc06g0002600 Simmondsia chinensis HOM05D005035 ORTHO05D006141 1.1e-62 243.4 139 81.3
MBI14_g12780_MAGBIO Magnolia biondii HOM05D005035 ORTHO05D006141 1.8e-62 242.7 145 80.7
Lalb_Chr02g0159811 Lupinus albus HOM05D005035 ORTHO05D006141 2.4e-62 242.3 146 79.5
Manes.17G120300 Manihot esculenta HOM05D005035 ORTHO05D006141 2.4e-62 242.3 152 80.9
Lalb_Chr06g0176451 Lupinus albus HOM05D005035 ORTHO05D006141 3.1e-62 241.9 146 80.1
Rhsim10G0028700 Rhododendron simsii HOM05D005035 ORTHO05D006141 3.1e-62 241.9 157 77.1
PSO591G0214 Papaver somniferum HOM05D005035 ORTHO05D006141 4.1e-62 241.5 146 78.8
Thecc.04G003200 Theobroma cacao HOM05D005035 ORTHO05D006141 4.1e-62 241.5 147 78.2
PSO832G3976 Papaver somniferum HOM05D005035 ORTHO05D006141 5.3e-62 241.1 146 78.8
Phvul.004G020500 Phaseolus vulgaris HOM05D005035 ORTHO05D006141 5.3e-62 241.1 142 78.2
Cc07_g02630 Coffea canephora HOM05D005035 ORTHO05D006141 6.9e-62 240.7 150 78.7
QL93p0205_0142 Quercus lobata HOM05D005035 ORTHO05D006141 9.0e-62 240.4 158 73.4
Potri.001G350900 Populus trichocarpa HOM05D005035 ORTHO05D006141 1.2e-61 240.0 136 85.3
Actinidia33975 Actinidia chinensis HOM05D005035 ORTHO05D006141 1.5e-61 239.6 139 82.0
Gohir.A09G024500 Gossypium hirsutum HOM05D005035 ORTHO05D006141 1.5e-61 239.6 147 78.9
Manes.15G180500 Manihot esculenta HOM05D005035 ORTHO05D006141 3.4e-61 238.4 151 79.5
Rhsim10G0028000 Rhododendron simsii HOM05D005035 ORTHO05D006141 3.4e-61 238.4 166 72.9
Eucgr.J02172 Eucalyptus grandis HOM05D005035 ORTHO05D006141 5.9e-61 237.7 146 78.1
Duzib147G0557 Durio zibethinus HOM05D005035 ORTHO05D006141 1.0e-60 236.9 146 77.4
Thhalv10027982m.g Eutrema salsugineum HOM05D005035 ORTHO05D006141 1.7e-60 236.1 147 78.9
Sp2g17120 Schrenkiella parvula HOM05D005035 ORTHO05D006141 1.7e-60 236.1 148 77.0
ClCG00G001700 Citrullus lanatus HOM05D005035 ORTHO05D006141 2.9e-60 235.3 171 67.8
ClCG09G018640 Citrullus lanatus HOM05D005035 ORTHO05D006141 2.9e-60 235.3 171 67.8
THA.LOC104805419 Tarenaya hassleriana HOM05D005035 ORTHO05D006141 2.9e-60 235.3 147 78.2
MSTRG.3309 Avicennia marina HOM05D005035 ORTHO05D006141 3.8e-60 235.0 135 83.0
Sp7g01920 Schrenkiella parvula HOM05D005035 ORTHO05D006141 5.0e-60 234.6 147 77.6
Migut.H00159 Erythranthe guttata HOM05D005035 ORTHO05D006141 6.5e-60 234.2 150 77.3
Sabra16G0230300 Salix brachista HOM05D005035 ORTHO05D006141 6.5e-60 234.2 136 83.8
Nitab4.5_0001952g0210 Nicotiana tabacum HOM05D005035 ORTHO05D006141 1.1e-59 233.4 134 82.1
Aa31LG9G1530 Aethionema arabicum HOM05D005035 ORTHO05D006141 1.4e-59 233.0 147 75.5
AL3G42320 Arabidopsis lyrata HOM05D005035 ORTHO05D006141 1.4e-59 233.0 147 76.9
AT2G04700 Arabidopsis thaliana HOM05D005035 ORTHO05D006141 1.4e-59 233.0 147 76.9
DCAR_011194 Daucus carota HOM05D005035 ORTHO05D006141 1.4e-59 233.0 144 77.8
Hma1.2p1_0375F.1_g139040 Hydrangea macrophylla HOM05D005035 ORTHO05D006141 1.4e-59 233.0 139 79.9
Nitab4.5_0007185g0060 Nicotiana tabacum HOM05D005035 ORTHO05D006141 1.4e-59 233.0 149 75.8
Carub.0003s2630 Capsella rubella HOM05D005035 ORTHO05D006141 1.9e-59 232.6 147 76.2
Thhalv10005082m.g Eutrema salsugineum HOM05D005035 ORTHO05D006141 1.9e-59 232.6 151 75.5
CAN.G206.60 Capsicum annuum HOM05D005035 ORTHO05D006141 3.2e-59 231.9 139 79.1
Psat1g079560 Pisum sativum HOM05D005035 ORTHO05D006141 3.2e-59 231.9 129 82.9
CDE04G0448 Ceratophyllum demersum HOM05D005035 ORTHO05D006141 4.2e-59 231.5 140 78.6
Migut.K01356 Erythranthe guttata HOM05D005035 ORTHO05D006141 4.2e-59 231.5 147 77.6
Lsat_1_v5_gn_0_16560 Lactuca sativa HOM05D005035 ORTHO05D006141 4.2e-59 231.5 134 81.3
SGA_v2.0_scaffold30G12503 Striga asiatica HOM05D005035 ORTHO05D006141 5.5e-59 231.1 129 85.3
Solyc02g087230.3 Solanum lycopersicum HOM05D005035 ORTHO05D006141 7.2e-59 230.7 135 81.5
Sopen02g031970 Solanum pennellii HOM05D005035 ORTHO05D006141 7.2e-59 230.7 135 81.5
Peaxi162Scf00129g00821 Petunia axillaris HOM05D005035 ORTHO05D006141 1.6e-58 229.6 143 76.9
BcaB06g27429 Brassica carinata HOM05D005035 ORTHO05D006141 2.1e-58 229.2 147 75.5
BraA04t16958Z Brassica rapa HOM05D005035 ORTHO05D006141 2.1e-58 229.2 147 75.5
ECA246G3539 Erigeron canadensis HOM05D005035 ORTHO05D006141 2.1e-58 229.2 146 78.1
HanXRQChr17g0548081 Helianthus annuus HOM05D005035 ORTHO05D006141 2.1e-58 229.2 136 80.1
A04p12970 Brassica napus HOM05D005035 ORTHO05D006141 2.7e-58 228.8 147 74.8
Duzib264G0892 Durio zibethinus HOM05D005035 ORTHO05D006141 2.7e-58 228.8 136 80.1
BolC4t26254H Brassica oleracea HOM05D005035 ORTHO05D006141 3.6e-58 228.4 123 84.6
Ciclev10013034m.g Citrus clementina HOM05D005035 ORTHO05D006141 3.0e-57 225.3 149 74.5
EL10Ac7g18004 Beta vulgaris HOM05D005035 ORTHO05D006141 3.9e-57 224.9 141 78.0
COL.COLO4_06152 Corchorus olitorius HOM05D005035 ORTHO05D006141 1.1e-56 223.4 142 75.4
Gorai.001G259100 Gossypium raimondii HOM05D005035 ORTHO05D006141 3.3e-56 221.9 132 79.5
MSTRG.23981 Avicennia marina HOM05D005035 ORTHO05D006141 4.3e-56 221.5 121 84.3
AagrBONN_evm.TU.Sc2ySwM_340.374 Anthoceros agrestis HOM05D005035 ORTHO05D006141 7.4e-56 220.7 146 72.6
Hund20034 Selenicereus undatus HOM05D005035 ORTHO05D006141 7.4e-56 220.7 128 80.5
Mapoly0037s0068 Marchantia polymorpha HOM05D005035 ORTHO05D006141 1.3e-55 219.9 124 79.8
Haze_14625 Corylus avellana HOM05D005035 ORTHO05D006141 2.8e-55 218.8 156 75.0
Sed0002098 Sechium edule HOM05D005035 ORTHO05D006141 4.8e-55 218.0 129 79.1
SalBow1G8037 Salvia bowleyana HOM05D005035 ORTHO05D006141 6.3e-55 217.6 147 72.8
Lsat_1_v5_gn_4_180660 Lactuca sativa HOM05D005035 ORTHO05D006141 1.4e-54 216.5 158 71.5
HPP92_003737 Vanilla planifolia HOM05D005035 ORTHO05D006141 1.4e-54 216.5 147 70.7
Pp3c4_19340 Physcomitrium patens HOM05D005035 ORTHO05D006141 7.7e-53 210.7 116 82.8
SMO147G0038 Selaginella moellendorffii HOM05D005035 ORTHO05D006141 1.0e-52 210.3 112 82.1
VMungo0464G2121 Vigna mungo HOM05D005035 ORTHO05D006141 1.0e-52 210.3 149 70.5
ATR1101G065 Amborella trichopoda HOM05D005035 ORTHO05D006141 1.3e-52 209.9 116 83.6
unitig_62.g23432 Utricularia gibba HOM05D005035 ORTHO05D006141 9.4e-51 203.8 122 81.1
Zm00001eb373700 Zea mays HOM05D005035 ORTHO05D006141 3.6e-50 201.8 138 69.6
Os09g0249900 Oryza sativa ssp. japonica HOM05D005035 ORTHO05D006141 4.7e-50 201.4 116 76.7
Pp3c3_28450 Physcomitrium patens HOM05D005035 ORTHO05D006141 4.7e-50 201.4 114 78.9
Cre03.g193950 Chlamydomonas reinhardtii HOM05D005035 ORTHO05D006141 7.9e-50 200.7 120 74.2
unitig_52.g17602 Utricularia gibba HOM05D005035 ORTHO05D006141 1.0e-49 200.3 126 74.6
MCO16G017 Micromonas commoda HOM05D005035 ORTHO05D006141 1.4e-49 199.9 141 65.2
CSS0001095 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 1.5e-48 196.4 145 72.4
THA.LOC104822811 Tarenaya hassleriana HOM05D005035 ORTHO05D006141 2.6e-48 195.7 105 83.8
AUR62041855 Chenopodium quinoa HOM05D005035 ORTHO05D006141 4.4e-48 194.9 144 67.4
AUR62022118 Chenopodium quinoa HOM05D005035 ORTHO05D006141 2.2e-47 192.6 104 81.7
CSS0000898 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 3.7e-47 191.8 149 70.5
AUR62001211 Chenopodium quinoa HOM05D005035 ORTHO05D006141 6.3e-47 191.0 104 80.8
PRCOL_00001533 Prasinoderma coloniale HOM05D005035 ORTHO05D006141 8.2e-47 190.7 128 70.3
arahy.Tifrunner.gnm1.ann1.JZED56 Arachis hypogaea HOM05D005035 ORTHO05D006141 1.2e-45 186.8 141 66.7
Gorai.006G028000 Gossypium raimondii HOM05D005035 ORTHO05D006141 7.7e-45 184.1 112 81.2
CBR_g4436 Chara braunii HOM05D005035 ORTHO05D006141 2.1e-42 176.0 91 81.3
arahy.Tifrunner.gnm1.ann1.IKM8ZR Arachis hypogaea HOM05D005035 ORTHO05D006141 2.7e-42 175.6 105 79.0
CARHR102650 Cardamine hirsuta HOM05D005035 ORTHO05D006141 6.1e-42 174.5 112 75.9
Atru.chr8.2413 Acer truncatum HOM05D005035 ORTHO05D006141 8.2e-39 164.1 152 62.5
QL02p078168 Quercus lobata HOM05D005035 ORTHO05D006141 1.6e-37 159.8 78 87.2
SEGI_15320 Sequoiadendron giganteum HOM05D005035 ORTHO05D006141 5.9e-37 157.9 100 75.0
Nn3g17009 Nelumbo nucifera HOM05D005035 ORTHO05D006141 3.8e-36 155.2 101 76.2
AUR62032082 Chenopodium quinoa HOM05D005035 ORTHO05D006141 9.4e-35 150.6 98 73.5
Gohir.D09G023800 Gossypium hirsutum HOM05D005035 ORTHO05D006141 1.1e-27 127.1 87 77.0
AUR62026990 Chenopodium quinoa HOM05D005035 ORTHO05D006141 2.5e-27 125.9 104 59.6
Rhsim08G0061500 Rhododendron simsii HOM05D005035 ORTHO05D006141 8.0e-26 120.9 134 47.0
C04p46660 Brassica napus HOM05D005035 ORTHO05D006141 4.0e-25 118.6 61 80.3
BcaB02g11482 Brassica carinata HOM05D005035 ORTHO05D006141 6.6e-20 101.3 62 67.7
QL02p078176 Quercus lobata HOM05D005035 ORTHO05D006141 1.5e-19 100.1 63 77.8
BcaC04g21225 Brassica carinata HOM05D005035 ORTHO05D006141 3.3e-19 99.0 52 86.5
Oeu031509.1 Olea europaea HOM05D005035 ORTHO05D006141 5.5e-19 98.2 296 28.0
vmacro18227 Vaccinium macrocarpon HOM05D005035 ORTHO05D006141 4.4e-16 88.6 74 68.9
CSS0035672 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 2.8e-15 85.9 52 71.2
Nn1g06334 Nelumbo nucifera HOM05D005035 ORTHO05D006141 2.5e-11 72.8 37 94.6
Dinv33674 Davidia involucrata HOM05D005035 ORTHO05D006141 7.3e-11 71.2 46 78.3
CSS0020716 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 1.6e-10 70.1 40 72.5
CSS0048463 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 2.1e-10 69.7 49 67.3
CARHR102660 Cardamine hirsuta HOM05D005035 ORTHO05D006141 3.1e-09 65.9 42 69.0
CSS0011814 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 8.3e-07 57.8 30 73.3


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