Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 1.9e-181 639.0 322 100.0
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 6.2e-148 527.7 344 79.1
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 2.0e-146 522.7 339 79.1
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 1.3e-145 520.0 316 83.5
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 2.4e-144 515.8 325 81.2
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 3.2e-144 515.4 333 79.0
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 4.2e-144 515.0 343 77.6
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 4.2e-144 515.0 337 78.3
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 1.2e-143 513.5 326 81.3
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 2.1e-143 512.7 331 78.9
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 1.3e-142 510.0 381 72.2
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 9.6e-141 503.8 326 78.5
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 6.2e-140 501.1 313 80.2
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 8.1e-140 500.7 322 79.2
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 8.1e-140 500.7 335 76.4
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 8.1e-140 500.7 313 79.6
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 2.4e-139 499.2 332 77.7
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 3.1e-139 498.8 328 77.7
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 6.9e-139 497.7 351 75.8
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 9.0e-139 497.3 330 77.0
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 1.5e-138 496.5 307 80.5
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 2.0e-138 496.1 309 80.9
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 2.6e-138 495.7 309 79.9
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 5.8e-138 494.6 326 77.9
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 7.6e-138 494.2 307 80.5
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 2.2e-137 492.7 307 81.1
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 2.9e-137 492.3 344 74.4
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 4.9e-137 491.5 318 78.9
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 4.9e-137 491.5 318 78.9
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 8.4e-137 490.7 344 74.4
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 1.4e-136 490.0 317 78.5
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 1.4e-136 490.0 318 79.2
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 1.9e-136 489.6 318 79.6
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 1.9e-136 489.6 338 74.6
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 1.9e-136 489.6 333 76.3
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 2.4e-136 489.2 324 77.5
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 2.4e-136 489.2 347 74.6
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 4.2e-136 488.4 326 76.1
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 1.2e-135 486.9 307 79.8
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 1.2e-135 486.9 314 78.0
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 3.5e-135 485.3 307 79.2
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 6.0e-135 484.6 307 79.8
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 6.0e-135 484.6 308 79.9
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 6.0e-135 484.6 308 79.9
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 7.9e-135 484.2 331 75.5
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 7.9e-135 484.2 317 77.9
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 1.8e-134 483.0 321 77.9
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 3.0e-134 482.3 319 77.1
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 3.0e-134 482.3 315 77.8
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 3.9e-134 481.9 321 76.9
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 6.7e-134 481.1 327 74.0
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 8.7e-134 480.7 305 79.7
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 2.5e-133 479.2 337 73.6
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 2.5e-133 479.2 307 78.8
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 2.5e-133 479.2 333 73.3
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 5.6e-133 478.0 308 79.2
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 3.7e-132 475.3 305 78.4
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 3.7e-132 475.3 307 77.5
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 6.2e-132 474.6 315 77.1
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 8.1e-132 474.2 314 76.4
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 8.1e-132 474.2 366 69.7
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 2.6e-130 469.2 332 74.4
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 4.5e-130 468.4 308 77.6
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 2.9e-129 465.7 332 73.8
MD12G1075700 Malus domestica HOM05D005540 ORTHO05D006932 2.5e-128 462.6 337 73.9
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 2.5e-128 462.6 305 75.7
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 9.3e-128 460.7 345 71.9
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 2.1e-127 459.5 307 74.3
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 1.8e-126 456.4 310 75.5
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 2.5e-125 452.6 318 75.8
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 5.7e-125 451.4 317 74.4
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 1.5e-122 443.4 296 78.4
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 2.2e-121 439.5 324 72.2
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 6.5e-121 438.0 307 74.9
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 9.3e-120 434.1 305 73.8
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 1.2e-119 433.7 331 70.1
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 6.7e-118 427.9 499 51.7
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 1.1e-117 427.2 286 78.3
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 4.3e-117 425.2 370 61.6
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 2.4e-115 419.5 342 66.4
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 2.6e-114 416.0 358 65.4
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 3.4e-114 415.6 321 69.5
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 5.9e-114 414.8 348 64.4
Peaxi162Scf00803g00528 Petunia axillaris HOM05D005540 ORTHO05D006932 6.5e-113 411.4 311 71.1
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 4.2e-112 408.7 627 43.2
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 1.2e-111 407.1 259 79.5
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 7.9e-111 404.4 305 68.2
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 1.0e-110 404.1 307 68.1
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 5.1e-110 401.7 289 73.7
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 1.2e-106 390.6 281 73.7
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 1.1e-104 384.0 320 61.6
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 2.5e-104 382.9 227 85.5
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 7.2e-104 381.3 306 65.0
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 3.3e-101 372.5 307 66.1
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 1.6e-98 363.6 262 71.8
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 5.9e-98 361.7 306 66.0
SGA_v2.0_scaffold49G18144 Striga asiatica HOM05D005540 ORTHO05D006932 5.9e-98 361.7 252 73.0
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 7.7e-98 361.3 237 75.9
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 1.7e-97 360.1 292 65.1
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 2.1e-95 353.2 294 60.9
SalBow3G0445 Salvia bowleyana HOM05D005540 ORTHO05D006932 2.7e-90 336.3 252 70.2
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 7.7e-90 334.7 262 64.5
MBI16_g05922_MAGBIO Magnolia biondii HOM05D005540 ORTHO05D006932 6.8e-86 321.6 244 68.4
DCAR_025877 Daucus carota HOM05D005540 ORTHO05D006932 2.6e-85 319.7 219 74.0
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 7.0e-83 311.6 228 68.9
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 5.9e-82 308.5 299 54.2
HPP92_024131 Vanilla planifolia HOM05D005540 ORTHO05D006932 7.7e-82 308.1 204 76.0
AUR62023244 Chenopodium quinoa HOM05D005540 ORTHO05D006932 1.6e-79 300.4 298 56.7
Haze_14219 Corylus avellana HOM05D005540 ORTHO05D006932 6.3e-76 288.5 234 68.4
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 2.0e-66 256.9 302 48.3
Hund16203 Selenicereus undatus HOM05D005540 ORTHO05D006932 8.6e-65 251.5 182 72.5
Oeu030810.1 Olea europaea HOM05D005540 ORTHO05D006932 3.1e-62 243.0 157 78.3
CBR_g12736 Chara braunii HOM05D005540 ORTHO05D006932 5.2e-62 242.3 153 75.8
FAN26G0473 Fragaria x ananassa HOM05D005540 ORTHO05D006932 4.4e-61 239.2 490 35.9
SGA_v2.0_scaffold6G03270 Striga asiatica HOM05D005540 ORTHO05D006932 4.9e-60 235.7 175 70.3
Cpa.g.sc116.26 Carica papaya HOM05D005540 ORTHO05D006932 1.7e-57 227.3 120 90.8
Nn3g18203 Nelumbo nucifera HOM05D005540 ORTHO05D006932 1.7e-57 227.3 120 90.8
Migut.H00263 Erythranthe guttata HOM05D005540 ORTHO05D006932 2.2e-52 210.3 158 70.9
SHI09520 Sapria himalayana HOM05D005540 ORTHO05D006932 1.4e-46 191.0 111 82.0
Cpa.g.sc116.24 Carica papaya HOM05D005540 ORTHO05D006932 3.8e-44 183.0 143 67.8
Nn3g18202 Nelumbo nucifera HOM05D005540 ORTHO05D006932 1.2e-39 167.9 100 79.0
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 7.6e-37 158.7 265 33.2
Hund16202 Selenicereus undatus HOM05D005540 ORTHO05D006932 7.6e-37 158.7 228 45.6
Haze_26639 Corylus avellana HOM05D005540 ORTHO05D006932 1.6e-34 151.0 267 34.8
Atru.chr4.2426 Acer truncatum HOM05D005540 ORTHO05D006932 7.6e-29 132.1 66 93.9
Cfa022314 Carpinus fangiana HOM05D005540 ORTHO05D006932 6.7e-25 119.0 324 27.2
MELO3C031731.2 Cucumis melo HOM05D005540 ORTHO05D006932 2.5e-24 117.1 63 87.3
FAN26G3341 Fragaria x ananassa HOM05D005540 ORTHO05D006932 3.3e-24 116.7 58 96.6
AUR62023196 Chenopodium quinoa HOM05D005540 ORTHO05D006932 2.1e-23 114.0 56 96.4
SalBow3G4194 Salvia bowleyana HOM05D005540 ORTHO05D006932 2.1e-23 114.0 83 74.7
MELO3C020384.2 Cucumis melo HOM05D005540 ORTHO05D006932 1.1e-22 111.7 70 74.3
Hma1.2p1_0179F.1_g079120 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 1.4e-22 111.3 64 85.9
SHI09525 Sapria himalayana HOM05D005540 ORTHO05D006932 1.2e-18 98.2 75 72.0
arahy.Tifrunner.gnm1.ann1.XYVL4V Arachis hypogaea HOM05D005540 ORTHO05D023714 4.5e-13 79.7 119 42.0
SEGI_04261 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 2.2e-12 77.4 60 65.0
Hma1.2p1_0179F.1_g079130 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 2.1e-10 70.9 33 93.9
SHI09501 Sapria himalayana HOM05D005540 ORTHO05D006932 1.3e-07 61.6 55 58.2
PGR042G3208 Punica granatum HOM05D005536 ORTHO05D006999 2.4e-06 57.4 97 37.1
Duzib132G1177 Durio zibethinus HOM05D005536 ORTHO05D006999 4.1e-06 56.6 97 34.0
Potri.003G015700 Populus trichocarpa HOM05D005536 ORTHO05D006999 4.1e-06 56.6 97 37.1
Gohir.A13G035900 Gossypium hirsutum HOM05D005536 ORTHO05D006999 6.9e-06 55.8 97 34.0


User provided reference genes

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