Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G102100 Prunus persica HOM05D006521 ORTHO05D008087 3.4e-204 714.9 399 100.0
RcHm_v2.0_Chr2g0115391 Rosa chinensis HOM05D006521 ORTHO05D008087 1.1e-173 613.6 356 86.5
FAN19G2752 Fragaria x ananassa HOM05D006521 ORTHO05D008087 4.5e-164 581.6 355 82.5
FvH4_1g21530 Fragaria vesca HOM05D006521 ORTHO05D008087 1.3e-163 580.1 355 82.3
FAN28G0591 Fragaria x ananassa HOM05D006521 ORTHO05D008087 5.0e-163 578.2 356 82.6
FAN23G2501 Fragaria x ananassa HOM05D006521 ORTHO05D008087 6.5e-163 577.8 355 82.3
MELO3C007776.2 Cucumis melo HOM05D006521 ORTHO05D008087 3.8e-155 552.0 363 76.0
ClCG01G018970 Citrullus lanatus HOM05D006521 ORTHO05D008087 3.2e-154 548.9 363 76.0
CANSAT01G1058 Cannabis sativa HOM05D006521 ORTHO05D008087 7.2e-154 547.7 365 75.6
CsaV3_6G045650 Cucumis sativus L. HOM05D006521 ORTHO05D008087 1.1e-151 540.4 362 75.1
Sed0002886 Sechium edule HOM05D006521 ORTHO05D008087 3.3e-151 538.9 360 75.0
Manes.12G138400 Manihot esculenta HOM05D006521 ORTHO05D008087 1.7e-147 526.6 362 73.8
Lalb_Chr11g0075241 Lupinus albus HOM05D006521 ORTHO05D008087 3.8e-147 525.4 352 74.7
Thecc.01G106200 Theobroma cacao HOM05D006521 ORTHO05D008087 5.5e-146 521.5 359 72.1
Duzib147G0857 Durio zibethinus HOM05D006521 ORTHO05D008087 1.0e-144 517.3 357 72.3
Sed0013283 Sechium edule HOM05D006521 ORTHO05D008087 3.9e-144 515.4 359 71.9
Atru.chr4.229 Acer truncatum HOM05D006521 ORTHO05D008087 1.5e-143 513.5 358 72.1
TWI74G1358 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 1.3e-142 510.4 354 72.0
Gorai.007G061700 Gossypium raimondii HOM05D006521 ORTHO05D008087 2.8e-142 509.2 357 70.3
Ca_16545_v3 Cicer arietinum L. HOM05D006521 ORTHO05D008087 3.7e-142 508.8 350 73.4
arahy.Tifrunner.gnm1.ann1.IK9JFE Arachis hypogaea HOM05D006521 ORTHO05D008087 8.2e-142 507.7 358 70.7
arahy.Tifrunner.gnm1.ann1.2NAN3W Arachis hypogaea HOM05D006521 ORTHO05D008087 1.4e-141 506.9 358 70.4
Eucgr.I00394 Eucalyptus grandis HOM05D006521 ORTHO05D008087 1.8e-141 506.5 361 71.2
Dinv00937 Davidia involucrata HOM05D006521 ORTHO05D008087 5.3e-141 505.0 364 70.9
Hma1.2p1_0011F.1_g007170 Hydrangea macrophylla HOM05D006521 ORTHO05D008087 1.6e-140 503.4 366 70.5
Medtr3g087760 Medicago truncatula HOM05D006521 ORTHO05D008087 2.0e-140 503.1 349 73.1
Dinv16313 Davidia involucrata HOM05D006521 ORTHO05D008087 2.6e-140 502.7 364 70.6
Glyma.18G019200 Glycine max HOM05D006521 ORTHO05D008087 4.5e-140 501.9 341 72.1
TWI77G0511 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 5.9e-140 501.5 356 71.6
Lj6g0010661 Lotus japonicus HOM05D006521 ORTHO05D008087 7.7e-140 501.1 350 71.4
QL06p050323 Quercus lobata HOM05D006521 ORTHO05D008087 1.0e-139 500.7 346 72.0
Glyma.11G238100 Glycine max HOM05D006521 ORTHO05D008087 1.3e-139 500.4 350 71.1
Cpa.g.sc20.228 Carica papaya HOM05D006521 ORTHO05D008087 1.7e-139 500.0 357 69.2
Ciclev10025891m.g Citrus clementina HOM05D006521 ORTHO05D008087 2.2e-139 499.6 357 71.4
TAR376G0467 Trochodendron aralioides HOM05D006521 ORTHO05D008087 5.0e-139 498.4 362 68.2
Duzib264G0874 Durio zibethinus HOM05D006521 ORTHO05D008087 8.5e-139 497.7 359 69.4
Phvul.001G250400 Phaseolus vulgaris HOM05D006521 ORTHO05D008087 8.5e-139 497.7 350 72.3
Psat5g088760 Pisum sativum HOM05D006521 ORTHO05D008087 8.5e-139 497.7 340 73.8
VMungo1383G3636 Vigna mungo HOM05D006521 ORTHO05D008087 2.5e-138 496.1 340 72.6
PGR004G2411 Punica granatum HOM05D006521 ORTHO05D008087 2.7e-137 492.7 352 70.2
THA.LOC104824871 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 1.0e-136 490.7 356 68.3
Potri.005G079300 Populus trichocarpa HOM05D006521 ORTHO05D008087 1.4e-136 490.3 349 69.6
THA.LOC104807700 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 4.0e-136 488.8 348 69.5
Gorai.008G103700 Gossypium raimondii HOM05D006521 ORTHO05D008087 1.2e-135 487.3 356 68.8
Aqoxy5G01962 Aquilegia oxysepala HOM05D006521 ORTHO05D008087 4.8e-134 481.9 364 67.0
PSO447G0171 Papaver somniferum HOM05D006521 ORTHO05D008087 3.1e-133 479.2 353 65.4
Sabra05G0065200 Salix brachista HOM05D006521 ORTHO05D004292 9.1e-133 477.6 344 68.6
TPR.G22881 Trifolium pratense HOM05D006521 ORTHO05D008087 1.6e-132 476.9 377 65.8
ECA234G2647 Erigeron canadensis HOM05D006521 ORTHO05D008087 5.9e-132 474.9 361 67.9
PSO210G2459 Papaver somniferum HOM05D006521 ORTHO05D008087 5.9e-132 474.9 353 64.9
HanXRQChr16g0527921 Helianthus annuus HOM05D006521 ORTHO05D008087 6.5e-131 471.5 353 68.3
Lsat_1_v5_gn_4_21220 Lactuca sativa HOM05D006521 ORTHO05D008087 6.5e-131 471.5 359 66.9
Carub.0007s0173 Capsella rubella HOM05D006521 ORTHO05D008087 5.5e-130 468.4 351 64.7
Thhalv10025314m.g Eutrema salsugineum HOM05D006521 ORTHO05D008087 5.5e-130 468.4 360 63.1
CARHR246880 Cardamine hirsuta HOM05D006521 ORTHO05D008087 7.2e-130 468.0 363 63.6
Sp7g36070 Schrenkiella parvula HOM05D006521 ORTHO05D008087 7.2e-130 468.0 351 65.0
Aa31LG6G15450 Aethionema arabicum HOM05D006521 ORTHO05D008087 1.2e-129 467.2 351 64.4
A08p23330 Brassica napus HOM05D006521 ORTHO05D008087 2.7e-129 466.1 348 64.1
BraA08t34287Z Brassica rapa HOM05D006521 ORTHO05D008087 2.7e-129 466.1 348 64.1
AT4G39820 Arabidopsis thaliana HOM05D006521 ORTHO05D008087 4.7e-129 465.3 351 64.7
AL7G12040 Arabidopsis lyrata HOM05D006521 ORTHO05D008087 1.0e-128 464.2 351 64.1
C03p78340 Brassica napus HOM05D006521 ORTHO05D008087 8.8e-128 461.1 349 63.9
BolC3t20094H Brassica oleracea HOM05D006521 ORTHO05D008087 8.8e-128 461.1 349 63.9
CiPaw.03G138700 Carya illinoinensis HOM05D006521 ORTHO05D008087 2.0e-127 459.9 354 66.9
SGA_v2.0_scaffold2G01323 Striga asiatica HOM05D006521 ORTHO05D008087 2.4e-125 453.0 356 63.8
Haze_24978 Corylus avellana HOM05D006521 ORTHO05D008087 9.1e-125 451.1 352 65.9
Rhsim10G0157900 Rhododendron simsii HOM05D006521 ORTHO05D008087 2.0e-124 449.9 355 63.7
Sc16g0005450 Simmondsia chinensis HOM05D006521 ORTHO05D008087 3.5e-124 449.1 360 64.4
Nitab4.5_0000715g0180 Nicotiana tabacum HOM05D006521 ORTHO05D008087 2.9e-123 446.0 357 63.3
Cc07_g15580 Coffea canephora HOM05D006521 ORTHO05D008087 5.0e-123 445.3 356 64.6
Oeu053565.1 Olea europaea HOM05D006521 ORTHO05D008087 6.6e-123 444.9 366 62.8
Solyc05g051840.1 Solanum lycopersicum HOM05D006521 ORTHO05D008087 6.6e-123 444.9 353 62.6
PGSC0003DMG400021832 Solanum tuberosum HOM05D006521 ORTHO05D008087 1.5e-122 443.7 356 61.8
Sopen05g030360 Solanum pennellii HOM05D006521 ORTHO05D008087 2.5e-122 443.0 353 62.3
SalBow3G0008 Salvia bowleyana HOM05D006521 ORTHO05D008087 2.1e-121 439.9 354 62.4
Lsat_1_v5_gn_2_67800 Lactuca sativa HOM05D006521 ORTHO05D008087 4.7e-121 438.7 339 64.9
HanXRQChr15g0471711 Helianthus annuus HOM05D006521 ORTHO05D008087 4.0e-120 435.6 336 64.0
AUR62002034 Chenopodium quinoa HOM05D006521 ORTHO05D008087 5.2e-120 435.3 355 63.4
AUR62003763 Chenopodium quinoa HOM05D006521 ORTHO05D008087 8.9e-120 434.5 357 62.7
SHI11594 Sapria himalayana HOM05D006521 ORTHO05D008087 1.5e-119 433.7 347 64.3
Migut.H02388 Erythranthe guttata HOM05D006521 ORTHO05D008087 3.7e-118 429.1 358 60.6
Ah.02g122760 Amaranthus hybridus HOM05D006521 ORTHO05D008087 8.3e-118 427.9 338 62.7
CAN.G1494.2 Capsicum annuum HOM05D006521 ORTHO05D008087 4.1e-117 425.6 356 61.0
Ah.02g120360 Amaranthus hybridus HOM05D006521 ORTHO05D008087 2.0e-116 423.3 338 61.8
Hund13498 Selenicereus undatus HOM05D006521 ORTHO05D008087 4.6e-116 422.2 334 62.9
DCAR_011503 Daucus carota HOM05D006521 ORTHO05D008087 1.3e-115 420.6 362 61.0
Cfa002704 Carpinus fangiana HOM05D006521 ORTHO05D008087 2.9e-115 419.5 352 62.8
unitig_32.g11814 Utricularia gibba HOM05D006521 ORTHO05D008087 7.5e-111 404.8 353 59.2
Lj4A881T25 Lonicera japonica HOM05D006521 ORTHO05D008087 1.2e-108 397.5 354 60.2
Lj4A883T21 Lonicera japonica HOM05D006521 ORTHO05D008087 1.4e-104 384.0 346 59.0
HPP92_016137 Vanilla planifolia HOM05D006521 ORTHO05D008087 3.1e-104 382.9 365 55.6
Nitab4.5_0005597g0010 Nicotiana tabacum HOM05D006521 ORTHO05D008087 2.9e-102 376.3 356 56.2
Nn1g05268 Nelumbo nucifera HOM05D006521 ORTHO05D008087 3.2e-101 372.9 308 62.0
Atru.chr1.3715 Acer truncatum HOM05D006521 ORTHO05D008087 1.2e-100 370.9 358 57.0
COL.COLO4_09911 Corchorus olitorius HOM05D006521 ORTHO05D008087 2.1e-100 370.2 354 57.1
CDE10G1235 Ceratophyllum demersum HOM05D006521 ORTHO05D008087 5.1e-99 365.5 365 53.4
ATR0789G153 Amborella trichopoda HOM05D006521 ORTHO05D008087 6.6e-99 365.2 473 43.8
BcaNung05326 Brassica carinata HOM05D006521 ORTHO05D008087 1.5e-98 364.0 298 58.7
Actinidia36602 Actinidia chinensis HOM05D006521 ORTHO05D008087 1.6e-97 360.5 293 64.2
C01p00850 Brassica napus HOM05D006521 ORTHO05D008087 6.0e-84 315.5 351 49.6
SEGI_26188 Sequoiadendron giganteum HOM05D006521 ORTHO05D008087 1.7e-78 297.4 559 34.0
SMO353G0213 Selaginella moellendorffii HOM05D006521 ORTHO05D008087 3.3e-74 283.1 340 44.1
Mapoly0165s0018 Marchantia polymorpha HOM05D006521 ORTHO05D008087 2.1e-73 280.4 430 37.2
AagrBONN_evm.TU.Sc2ySwM_368.767 Anthoceros agrestis HOM05D006521 ORTHO05D008087 3.6e-73 279.6 399 38.6
EL10Ac6g15070 Beta vulgaris HOM05D006521 ORTHO05D008087 9.0e-72 275.0 216 66.2
A01p00740 Brassica napus HOM05D006521 ORTHO05D008087 2.4e-69 266.9 259 54.4
Pp3c22_3810 Physcomitrium patens HOM05D006521 ORTHO05D008087 1.3e-67 261.2 402 37.3
Pp3c19_5060 Physcomitrium patens HOM05D006521 ORTHO05D008087 1.8e-67 260.8 402 36.6
Os02g0550400 Oryza sativa ssp. japonica HOM05D006521 ORTHO05D008087 6.2e-65 252.3 333 45.3
Pp3c10_9400 Physcomitrium patens HOM05D006521 ORTHO05D008087 2.6e-63 246.9 378 35.7
ECA238G1388 Erigeron canadensis HOM05D001700 ORTHO05D002131 1.4e-61 241.1 161 72.7
ECA238G2228 Erigeron canadensis HOM05D006521 ORTHO05D008087 7.1e-61 238.8 156 74.4
Atru.chr1.3697 Acer truncatum HOM05D006521 ORTHO05D008087 1.3e-59 234.6 147 79.6
Pp3c14_5890 Physcomitrium patens HOM05D006521 ORTHO05D008087 1.9e-58 230.7 378 33.9
BcaNung00904 Brassica carinata HOM05D006521 ORTHO05D008087 9.0e-48 195.3 117 79.5
Peaxi162Scf00295g00033 Petunia axillaris HOM05D006521 ORTHO05D008087 2.0e-47 194.1 172 58.1
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 2.0e-39 167.5 107 76.6
HanXRQChr10g0288811 Helianthus annuus HOM05D006521 ORTHO05D008087 1.1e-37 161.8 105 78.1
CBR_g34484 Chara braunii HOM05D006521 ORTHO05D008087 7.0e-32 142.5 245 34.7
TAR636G0192 Trochodendron aralioides HOM05D006521 ORTHO05D008087 3.5e-31 140.2 127 59.8
Atru.chr1.3698 Acer truncatum HOM05D006521 ORTHO05D008087 1.6e-15 88.2 66 66.7
GSVIVG01022164001 Vitis vinifera HOM05D006521 ORTHO05D008087 3.8e-14 83.6 72 62.5
PRCOL_00001846 Prasinoderma coloniale HOM05D006521 ORTHO05D008087 8.3e-09 65.9 276 25.4
CDE10G1372 Ceratophyllum demersum HOM05D006521 ORTHO05D008087 4.1e-08 63.5 58 48.3


User provided reference genes

Program Settings