Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G029100 Prunus persica HOM05D001439 ORTHO05D007599 9.8e-28 125.9 58 100.0
Prupe.3G029400 Prunus persica HOM05D001439 ORTHO05D007599 4.1e-26 120.6 57 96.5
CiPaw.04G180000 Carya illinoinensis HOM05D001439 ORTHO05D007599 5.8e-20 100.1 57 78.9
QL04p042996 Quercus lobata HOM05D001439 ORTHO05D007599 9.8e-20 99.4 56 80.4
MD17G1156400 Malus domestica HOM05D001439 ORTHO05D007599 2.2e-19 98.2 57 84.2
FvH4_6g36260 Fragaria vesca HOM05D001439 ORTHO05D007599 3.7e-19 97.4 57 78.9
GSVIVG01036776001 Vitis vinifera HOM05D001439 ORTHO05D007599 1.1e-18 95.9 57 75.4
Dinv30126 Davidia involucrata HOM05D001439 ORTHO05D007599 1.4e-18 95.5 57 78.9
Actinidia06779 Actinidia chinensis HOM05D001439 ORTHO05D007599 2.4e-18 94.7 57 75.4
Actinidia07830 Actinidia chinensis HOM05D001439 ORTHO05D007599 2.4e-18 94.7 57 75.4
Haze_24510 Corylus avellana HOM05D001439 ORTHO05D007599 2.4e-18 94.7 57 78.9
Duzib138G1511 Durio zibethinus HOM05D001439 ORTHO05D007599 3.2e-18 94.4 57 78.9
Eucgr.K01361 Eucalyptus grandis HOM05D001439 ORTHO05D007599 4.1e-18 94.0 57 71.9
Oeu016030.1 Olea europaea HOM05D001439 ORTHO05D007599 4.1e-18 94.0 55 76.4
TAR375G1143 Trochodendron aralioides HOM05D001439 ORTHO05D007599 5.4e-18 93.6 57 73.7
Hma1.2p1_0345F.1_g131230 Hydrangea macrophylla HOM05D001439 ORTHO05D007599 9.2e-18 92.8 56 75.0
Nn4g24992 Nelumbo nucifera HOM05D001439 ORTHO05D007599 1.2e-17 92.4 55 76.4
MD09G1170800 Malus domestica HOM05D001439 ORTHO05D007599 1.6e-17 92.0 57 80.7
Thecc.01G203900 Theobroma cacao HOM05D001439 ORTHO05D007599 2.0e-17 91.7 57 77.2
MSTRG.9006 Avicennia marina HOM05D001439 ORTHO05D007599 3.5e-17 90.9 54 79.6
FAN14G5546 Fragaria x ananassa HOM05D001439 ORTHO05D007599 3.5e-17 90.9 63 71.4
FAN14G5823 Fragaria x ananassa HOM05D001439 ORTHO05D007599 3.5e-17 90.9 63 71.4
RcHm_v2.0_Chr2g0148261 Rosa chinensis HOM05D001439 ORTHO05D007599 3.5e-17 90.9 55 74.5
Cfa002303 Carpinus fangiana HOM05D001439 ORTHO05D007599 6.0e-17 90.1 57 75.4
ClCG09G010560 Citrullus lanatus HOM05D001439 ORTHO05D007599 6.0e-17 90.1 57 71.9
Duzib133G1111 Durio zibethinus HOM05D001439 ORTHO05D007599 6.0e-17 90.1 57 77.2
Gohir.A11G145900 Gossypium hirsutum HOM05D001439 ORTHO05D007599 6.0e-17 90.1 57 75.4
Gohir.D11G152000 Gossypium hirsutum HOM05D001439 ORTHO05D007599 6.0e-17 90.1 57 75.4
FAN05G2787 Fragaria x ananassa HOM05D001439 ORTHO05D007599 1.3e-16 89.0 63 69.8
Ciclev10014094m.g Citrus clementina HOM05D001439 ORTHO05D007599 1.7e-16 88.6 55 74.5
Gorai.007G162700 Gossypium raimondii HOM05D001439 ORTHO05D007599 1.7e-16 88.6 57 73.7
Sabra14G0132600 Salix brachista HOM05D001439 ORTHO05D007599 2.3e-16 88.2 57 71.9
CsaV3_7G023680 Cucumis sativus L. HOM05D001439 ORTHO05D007599 3.0e-16 87.8 57 70.2
Atru.chr6.3472 Acer truncatum HOM05D001439 ORTHO05D007599 3.9e-16 87.4 55 74.5
MELO3C024106.2 Cucumis melo HOM05D001439 ORTHO05D007599 3.9e-16 87.4 57 70.2
Lj2C38T11 Lonicera japonica HOM05D001439 ORTHO05D007599 3.9e-16 87.4 57 73.7
Potri.014G173300 Populus trichocarpa HOM05D001439 ORTHO05D007599 3.9e-16 87.4 57 70.2
COL.COLO4_19723 Corchorus olitorius HOM05D001439 ORTHO05D007599 5.0e-16 87.0 57 73.7
Manes.12G058700 Manihot esculenta HOM05D001439 ORTHO05D007599 5.0e-16 87.0 55 72.7
Dinv05741 Davidia involucrata HOM05D001439 ORTHO05D007599 6.6e-16 86.7 54 75.9
FAN02G0189 Fragaria x ananassa HOM05D001439 ORTHO05D007599 6.6e-16 86.7 63 68.3
SalBow3G1926 Salvia bowleyana HOM05D001439 ORTHO05D007599 8.6e-16 86.3 53 75.5
SalBow3G2022 Salvia bowleyana HOM05D001439 ORTHO05D007599 8.6e-16 86.3 53 75.5
Migut.F00815 Erythranthe guttata HOM05D001439 ORTHO05D007599 1.1e-15 85.9 54 74.1
CSS0026010 Camellia sinensis var. sinensis HOM05D001439 ORTHO05D007599 1.5e-15 85.5 55 76.4
FAN09G0293 Fragaria x ananassa HOM05D001439 ORTHO05D007599 1.5e-15 85.5 63 68.3
HanXRQChr07g0200581 Helianthus annuus HOM05D001439 ORTHO05D007599 1.5e-15 85.5 57 71.9
MBI18_g11240_MAGBIO Magnolia biondii HOM05D001439 ORTHO05D007599 1.5e-15 85.5 54 72.2
MSTRG.9529 Avicennia marina HOM05D001439 ORTHO05D007599 1.9e-15 85.1 54 72.2
Aqoxy1G03116 Aquilegia oxysepala HOM05D001439 ORTHO05D007599 3.3e-15 84.3 56 69.6
Cpa.g.sc8.11 Carica papaya HOM05D001439 ORTHO05D007599 3.3e-15 84.3 55 67.3
Rhsim09G0138700 Rhododendron simsii HOM05D001439 ORTHO05D007599 4.3e-15 84.0 56 69.6
Cc02_g09100 Coffea canephora HOM05D001439 ORTHO05D007599 5.6e-15 83.6 53 71.7
Sed0014026 Sechium edule HOM05D001439 ORTHO05D007599 9.5e-15 82.8 59 66.1
Actinidia03300 Actinidia chinensis HOM05D001439 ORTHO05D007599 1.6e-14 82.0 57 66.7
Lalb_Chr09g0331921 Lupinus albus HOM05D001439 ORTHO05D007599 2.1e-14 81.6 57 63.2
DCAR_028382 Daucus carota HOM05D001439 ORTHO05D007599 2.8e-14 81.3 57 68.4
HanXRQChr14g0455641 Helianthus annuus HOM05D001439 ORTHO05D007599 3.6e-14 80.9 57 68.4
TWI18G1300 Tripterygium wilfordii HOM05D001439 ORTHO05D007599 4.7e-14 80.5 57 66.7
SGA_v2.0_scaffold90G27703 Striga asiatica HOM05D000200 ORTHO05D000262 6.2e-14 80.1 57 64.9
THA.LOC104826638 Tarenaya hassleriana HOM05D001439 ORTHO05D007599 8.1e-14 79.7 55 65.5
Hund22225 Selenicereus undatus HOM05D001439 ORTHO05D007599 1.1e-13 79.3 56 67.9
Lsat_1_v5_gn_2_107580 Lactuca sativa HOM05D001439 ORTHO05D007599 1.4e-13 79.0 54 68.5
THA.LOC104815378 Tarenaya hassleriana HOM05D001439 ORTHO05D007599 1.4e-13 79.0 57 64.9
Lalb_Chr05g0223731 Lupinus albus HOM05D001439 ORTHO05D007599 1.8e-13 78.6 57 57.9
Aa31sc565G40 Aethionema arabicum HOM05D001439 ORTHO05D007599 3.1e-13 77.8 55 65.5
arahy.Tifrunner.gnm1.ann1.CH5A50 Arachis hypogaea HOM05D001439 ORTHO05D007599 4.0e-13 77.4 57 57.9
Sc09g0004660 Simmondsia chinensis HOM05D001439 ORTHO05D007599 4.0e-13 77.4 57 61.4
Oeu012227.1 Olea europaea HOM05D001439 ORTHO05D007599 5.2e-13 77.0 71 56.3
arahy.Tifrunner.gnm1.ann1.0SQJ2Y Arachis hypogaea HOM05D001439 ORTHO05D007599 6.8e-13 76.6 57 57.9
Zm00001eb061430 Zea mays HOM05D001439 ORTHO05D007599 6.8e-13 76.6 54 66.7
EL10Ac4g08849 Beta vulgaris HOM05D001439 ORTHO05D007599 1.5e-12 75.5 56 62.5
Lj2A362T44 Lonicera japonica HOM05D001439 ORTHO05D007599 1.5e-12 75.5 74 55.4
Ah.04g162790 Amaranthus hybridus HOM05D001439 ORTHO05D007599 2.0e-12 75.1 54 63.0
ATR1098G049 Amborella trichopoda HOM05D001439 ORTHO05D007599 2.0e-12 75.1 53 64.2
AL9U11900 Arabidopsis lyrata HOM05D001439 ORTHO05D007599 3.4e-12 74.3 55 61.8
ECA238G3650 Erigeron canadensis HOM05D001439 ORTHO05D007599 3.4e-12 74.3 57 61.4
CARHR218110 Cardamine hirsuta HOM05D001439 ORTHO05D007599 5.8e-12 73.6 55 60.0
PGR044G2616 Punica granatum HOM05D001439 ORTHO05D007599 5.8e-12 73.6 53 64.2
Solyc11g006200.2 Solanum lycopersicum HOM05D001439 ORTHO05D007599 7.5e-12 73.2 53 66.0
Sopen11g002130 Solanum pennellii HOM05D001439 ORTHO05D007599 7.5e-12 73.2 53 66.0
PGSC0003DMG400000999 Solanum tuberosum HOM05D001439 ORTHO05D007599 7.5e-12 73.2 53 64.2
HPP92_025329 Vanilla planifolia HOM05D001439 ORTHO05D007599 7.5e-12 73.2 53 62.3
Nitab4.5_0005417g0010 Nicotiana tabacum HOM05D001439 ORTHO05D007599 9.8e-12 72.8 53 64.2
AT4G12750 Arabidopsis thaliana HOM05D001439 ORTHO05D007599 1.7e-11 72.0 54 61.1
Nitab4.5_0003799g0010 Nicotiana tabacum HOM05D001439 ORTHO05D007599 2.2e-11 71.6 53 64.2
PSO063G6089 Papaver somniferum HOM05D001439 ORTHO05D007599 2.2e-11 71.6 55 61.8
Glyma.05G221500 Glycine max HOM05D001439 ORTHO05D007599 2.9e-11 71.2 54 63.0
PSO782G0625 Papaver somniferum HOM05D001439 ORTHO05D007599 3.7e-11 70.9 55 61.8
CDE02G3848 Ceratophyllum demersum HOM05D001439 ORTHO05D007599 4.9e-11 70.5 54 63.0
AUR62037546 Chenopodium quinoa HOM05D001439 ORTHO05D007599 4.9e-11 70.5 57 59.6
TWI36G0060 Tripterygium wilfordii HOM05D001439 ORTHO05D007599 4.9e-11 70.5 56 60.7
CAN.G1256.6 Capsicum annuum HOM05D001439 ORTHO05D007599 6.4e-11 70.1 53 62.3
unitig_46.g18727 Utricularia gibba HOM05D001439 ORTHO05D007599 6.4e-11 70.1 57 59.6
Carub.0007s3007 Capsella rubella HOM05D001439 ORTHO05D007599 8.3e-11 69.7 55 58.2
Lj4g0024460 Lotus japonicus HOM05D001439 ORTHO05D007599 8.3e-11 69.7 54 61.1
Phvul.002G303200 Phaseolus vulgaris HOM05D001439 ORTHO05D007599 1.1e-10 69.3 54 61.1
Peaxi162Scf00120g00521 Petunia axillaris HOM05D001439 ORTHO05D007599 1.9e-10 68.6 53 60.4
BcaB04g17209 Brassica carinata HOM05D001439 ORTHO05D007599 2.4e-10 68.2 57 59.6
AUR62035538 Chenopodium quinoa HOM05D001439 ORTHO05D007599 2.4e-10 68.2 57 57.9
Glyma.08G028000 Glycine max HOM05D001439 ORTHO05D007599 2.4e-10 68.2 54 59.3
VMungo0251G2358 Vigna mungo HOM05D001439 ORTHO05D007599 2.4e-10 68.2 54 57.4
AUR62040349 Chenopodium quinoa HOM05D006702 ORTHO05D008540 3.2e-10 67.8 57 57.9
Thhalv10024262m.g Eutrema salsugineum HOM05D001439 ORTHO05D007599 4.1e-10 67.4 62 54.8
Ca_17413_v3 Cicer arietinum L. HOM05D001439 ORTHO05D007599 9.2e-10 66.2 54 59.3
TPR.G22823 Trifolium pratense HOM05D001439 ORTHO05D007599 4.6e-09 63.9 54 55.6
CDE01G0356 Ceratophyllum demersum HOM05D001439 ORTHO05D007599 7.8e-09 63.2 54 61.1
CANSAT56G1506 Cannabis sativa HOM05D001439 ORTHO05D007599 1.7e-08 62.0 57 61.4
CANSAT56G2417 Cannabis sativa HOM05D001439 ORTHO05D007599 1.7e-08 62.0 57 61.4
Sp7g09140 Schrenkiella parvula HOM05D001439 ORTHO05D007599 1.7e-08 62.0 46 58.7
vmacro10348 Vaccinium macrocarpon HOM05D001439 ORTHO05D007599 3.3e-07 57.8 38 65.8
BcaC01g01268 Brassica carinata HOM05D001439 ORTHO05D007599 1.6e-06 55.5 57 54.4
C03p90000 Brassica napus HOM05D001439 ORTHO05D007599 1.6e-06 55.5 57 54.4
BraA08t32320Z Brassica rapa HOM05D001439 ORTHO05D007599 1.6e-06 55.5 57 54.4
A08p02880 Brassica napus HOM05D001439 ORTHO05D007599 4.7e-06 53.9 57 54.4


User provided reference genes

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