Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 1.3e-148 529.6 260 100.0
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 3.4e-112 408.7 260 78.1
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 3.3e-107 392.1 265 76.2
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 1.4e-105 386.7 248 78.6
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 1.5e-104 383.3 250 78.4
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 1.2e-96 357.1 262 70.2
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 5.4e-94 348.2 260 68.5
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 6.0e-93 344.7 262 67.9
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 2.1e-90 336.3 263 65.4
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 6.2e-90 334.7 250 68.0
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 5.3e-89 331.6 231 73.2
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 2.6e-88 329.3 247 66.4
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 5.8e-88 328.2 261 63.2
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 1.7e-87 326.6 260 62.7
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 3.8e-87 325.5 245 65.7
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 4.9e-87 325.1 226 72.1
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 4.9e-87 325.1 261 63.6
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 3.2e-86 322.4 225 71.6
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 5.5e-86 321.6 226 68.1
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 2.1e-85 319.7 251 63.3
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 3.5e-85 318.9 220 72.7
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 1.8e-84 316.6 242 63.6
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 3.0e-84 315.8 221 68.8
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 6.7e-84 314.7 266 60.2
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 8.7e-84 314.3 265 61.5
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 1.1e-83 313.9 258 62.0
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 1.1e-83 313.9 258 62.0
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 1.9e-83 313.2 218 66.5
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 3.3e-83 312.4 218 66.1
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 3.3e-83 312.4 218 66.5
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 3.3e-83 312.4 259 60.2
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 3.3e-83 312.4 227 63.9
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 3.3e-83 312.4 229 67.7
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 7.4e-83 311.2 220 66.8
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 7.4e-83 311.2 259 61.0
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 7.4e-83 311.2 263 60.1
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 1.6e-82 310.1 218 67.0
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 3.7e-82 308.9 265 62.3
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 3.7e-82 308.9 252 61.5
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 4.8e-82 308.5 226 67.3
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 1.8e-81 306.6 226 66.8
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 2.4e-81 306.2 254 59.1
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 6.9e-81 304.7 259 60.6
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 6.9e-81 304.7 218 66.5
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 1.2e-80 303.9 227 63.9
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 2.0e-80 303.1 217 64.5
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 5.8e-80 301.6 210 66.2
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 1.7e-79 300.1 258 60.1
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 1.7e-79 300.1 222 64.4
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 2.2e-79 299.7 210 68.6
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 3.8e-79 298.9 256 59.4
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 4.9e-79 298.5 229 62.9
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 1.9e-78 296.6 268 58.2
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 5.5e-78 295.0 222 67.6
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 7.1e-78 294.7 225 64.0
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 1.2e-77 293.9 242 61.2
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 2.3e-76 289.7 220 63.6
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 8.7e-76 287.7 222 63.5
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 1.9e-75 286.6 190 67.4
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 9.7e-75 284.3 219 61.2
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 1.4e-73 280.4 216 60.6
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 3.1e-73 279.3 233 60.9
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 2.0e-72 276.6 204 66.7
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 3.4e-72 275.8 216 63.4
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 1.0e-71 274.2 244 61.1
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 1.0e-71 274.2 208 61.5
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 6.5e-71 271.6 199 64.8
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 1.9e-70 270.0 212 60.4
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 6.1e-69 265.0 189 68.8
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 3.0e-68 262.7 217 59.0
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 5.3e-65 251.9 205 57.1
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 3.0e-60 236.1 207 57.0
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 2.8e-58 229.6 205 52.2
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 1.1e-57 227.6 165 64.8
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 3.1e-57 226.1 194 54.6
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 4.1e-57 225.7 196 54.1
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 2.6e-56 223.0 217 52.1
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 6.5e-55 218.4 169 65.7
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 3.2e-54 216.1 168 63.7
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 1.0e-52 211.1 194 53.6
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 1.1e-46 191.0 253 41.9
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 5.5e-46 188.7 134 67.9
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 9.4e-46 188.0 128 68.0
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 5.7e-43 178.7 105 71.4
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 7.5e-43 178.3 264 43.2
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 5.3e-41 172.2 133 69.2
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 8.0e-37 158.3 172 48.8
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 4.0e-36 156.0 122 63.9
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 6.8e-36 155.2 85 84.7
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 4.5e-32 142.5 112 63.4
Sc17g0000260 Simmondsia chinensis HOM05D007717 ORTHO05D009694 7.5e-27 125.2 114 57.9
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 2.8e-26 123.2 102 60.8
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 6.6e-23 112.1 212 35.8
CARHR249750 Cardamine hirsuta HOM05D007717 ORTHO05D009694 8.6e-15 85.1 61 62.3
CBR_g40482 Chara braunii HOM05D001161 ORTHO05D000497 3.4e-11 73.2 97 39.2


User provided reference genes

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