Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G306000 Prunus persica HOM05D004719 ORTHO05D005519 2.9e-123 445.3 228 100.0
MD07G1283600 Malus domestica HOM05D004719 ORTHO05D005519 2.5e-90 335.9 231 77.1
MD01G1213900 Malus domestica HOM05D004719 ORTHO05D005519 1.1e-82 310.5 233 74.7
Dinv35299 Davidia involucrata HOM05D004719 ORTHO05D005519 6.3e-78 294.7 230 68.7
CSS0006896 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 8.2e-78 294.3 232 68.1
CSS0042605 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 8.2e-78 294.3 232 68.1
Duzib084G0320 Durio zibethinus HOM05D004719 ORTHO05D005519 3.4e-76 288.9 239 64.4
TWI14G0874 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 1.7e-75 286.6 229 66.4
TWI23G0029 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 5.0e-75 285.0 229 66.4
Nn1g01780 Nelumbo nucifera HOM05D004719 ORTHO05D005519 1.9e-74 283.1 230 65.7
TAR333G0005 Trochodendron aralioides HOM05D004719 ORTHO05D005519 7.2e-74 281.2 232 66.4
Gohir.A11G013800 Gossypium hirsutum HOM05D004719 ORTHO05D005519 9.4e-74 280.8 230 64.8
Nn7g37372 Nelumbo nucifera HOM05D004719 ORTHO05D005519 1.2e-73 280.4 232 65.1
vmacro10099 Vaccinium macrocarpon HOM05D004719 ORTHO05D005519 1.2e-73 280.4 232 65.1
Gohir.D11G014000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 2.1e-73 279.6 230 64.8
TWI39G0409 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 4.6e-73 278.5 229 65.5
Atru.chr1.287 Acer truncatum HOM05D004719 ORTHO05D005519 7.9e-73 277.7 233 66.1
Cfa016352 Carpinus fangiana HOM05D004719 ORTHO05D005519 1.4e-72 276.9 239 65.3
Gorai.007G014400 Gossypium raimondii HOM05D004719 ORTHO05D005519 3.0e-72 275.8 231 64.9
FAN06G4721 Fragaria x ananassa HOM05D004719 ORTHO05D005519 8.2e-70 267.7 235 61.7
Thecc.03G191400 Theobroma cacao HOM05D004719 ORTHO05D005519 8.2e-70 267.7 236 62.3
CiPaw.06G006600 Carya illinoinensis HOM05D004719 ORTHO05D005519 1.4e-69 266.9 216 67.6
Duzib205G0172 Durio zibethinus HOM05D004719 ORTHO05D005519 2.4e-69 266.2 232 60.3
FAN10G3127 Fragaria x ananassa HOM05D004719 ORTHO05D005519 4.1e-69 265.4 238 61.3
Haze_00101 Corylus avellana HOM05D004719 ORTHO05D005519 6.9e-69 264.6 243 63.4
FAN03G2418 Fragaria x ananassa HOM05D004719 ORTHO05D005519 2.0e-68 263.1 239 61.1
PSO170G2586 Papaver somniferum HOM05D004719 ORTHO05D005519 2.6e-68 262.7 231 63.2
Rhsim09G0203300 Rhododendron simsii HOM05D004719 ORTHO05D005519 2.6e-68 262.7 245 60.0
FAN01G1522 Fragaria x ananassa HOM05D004719 ORTHO05D005519 3.4e-68 262.3 244 59.8
Duzib068G0142 Durio zibethinus HOM05D004719 ORTHO05D005519 5.9e-68 261.5 229 60.7
PSO063G4149 Papaver somniferum HOM05D004719 ORTHO05D005519 5.9e-68 261.5 231 62.8
Manes.06G156000 Manihot esculenta HOM05D004719 ORTHO05D005519 7.7e-68 261.2 208 66.8
Sed0024250 Sechium edule HOM05D004719 ORTHO05D005519 2.2e-67 259.6 229 60.7
FvH4_7g30890 Fragaria vesca HOM05D004719 ORTHO05D005519 1.4e-66 256.9 237 59.9
QL09p011210 Quercus lobata HOM05D004719 ORTHO05D005519 1.9e-66 256.5 236 59.3
TAR374G0131 Trochodendron aralioides HOM05D004719 ORTHO05D005519 1.9e-66 256.5 228 63.2
MELO3C005862.2 Cucumis melo HOM05D004719 ORTHO05D005519 3.2e-66 255.8 231 63.2
Potri.012G033300 Populus trichocarpa HOM05D004719 ORTHO05D005519 3.2e-66 255.8 232 59.5
SGA_v2.0_scaffold192G40593 Striga asiatica HOM05D004719 ORTHO05D005519 4.2e-66 255.4 237 61.2
Actinidia31859 Actinidia chinensis HOM05D004719 ORTHO05D005519 2.7e-65 252.7 231 62.3
ClCG01G000680 Citrullus lanatus HOM05D004719 ORTHO05D005519 2.7e-65 252.7 260 58.1
RcHm_v2.0_Chr1g0379961 Rosa chinensis HOM05D004719 ORTHO05D005519 2.7e-65 252.7 238 60.5
CsaV3_5G000780 Cucumis sativus L. HOM05D004719 ORTHO05D005519 6.1e-65 251.5 230 60.9
Sed0016292 Sechium edule HOM05D004719 ORTHO05D005519 6.1e-65 251.5 234 59.0
Cc02_g02010 Coffea canephora HOM05D004719 ORTHO05D005519 5.1e-64 248.4 231 61.5
Hma1.2p1_1891F.1_g306690 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 2.0e-63 246.5 226 58.4
SalBow4G0130 Salvia bowleyana HOM05D004719 ORTHO05D005519 3.3e-63 245.7 235 57.0
THA.LOC104800282 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 9.7e-63 244.2 237 58.2
Ciclev10005830m.g Citrus clementina HOM05D004719 ORTHO05D005519 1.3e-62 243.8 232 60.8
MSTRG.8686 Avicennia marina HOM05D004719 ORTHO05D005519 2.2e-62 243.0 235 57.9
Thhalv10014603m.g Eutrema salsugineum HOM05D004719 ORTHO05D005519 2.2e-62 243.0 233 58.4
Hma1.2p1_0327F.1_g126670 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 2.8e-62 242.7 229 58.1
SalBow4G0254 Salvia bowleyana HOM05D004719 ORTHO05D005519 2.8e-62 242.7 235 56.6
Sp6g15480 Schrenkiella parvula HOM05D004719 ORTHO05D005519 6.3e-62 241.5 238 57.1
EL10Ac3g05361 Beta vulgaris HOM05D004719 ORTHO05D005519 1.1e-61 240.7 229 59.4
AUR62021055 Chenopodium quinoa HOM05D004719 ORTHO05D005519 1.8e-61 240.0 234 59.8
Nitab4.5_0001331g0150 Nicotiana tabacum HOM05D004719 ORTHO05D005519 2.4e-61 239.6 234 55.6
Nitab4.5_0000472g0190 Nicotiana tabacum HOM05D004719 ORTHO05D005519 5.3e-61 238.4 234 55.1
Aqoxy5G04028 Aquilegia oxysepala HOM05D004719 ORTHO05D005519 7.0e-61 238.0 232 59.9
arahy.Tifrunner.gnm1.ann1.A0EQPQ Arachis hypogaea HOM05D004719 ORTHO05D005519 1.2e-60 237.3 215 62.3
Hma1.2p1_0142F.1_g064100 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 1.2e-60 237.3 248 54.4
Oeu049096.1 Olea europaea HOM05D004719 ORTHO05D005519 4.5e-60 235.3 226 57.1
Cpa.g.sc3.37 Carica papaya HOM05D004719 ORTHO05D005519 7.7e-60 234.6 234 58.1
AUR62031477 Chenopodium quinoa HOM05D004719 ORTHO05D005519 2.2e-59 233.0 232 58.6
Oeu009271.1 Olea europaea HOM05D004719 ORTHO05D005519 3.8e-59 232.3 231 55.8
Manes.14G019414 Manihot esculenta HOM05D004719 ORTHO05D005519 5.0e-59 231.9 185 67.6
Migut.F00251 Erythranthe guttata HOM05D004719 ORTHO05D005519 6.5e-59 231.5 233 56.2
unitig_747.g21854 Utricularia gibba HOM05D004719 ORTHO05D005519 8.5e-59 231.1 229 54.1
Carub.0008s1351 Capsella rubella HOM05D004719 ORTHO05D005519 1.9e-58 229.9 238 58.4
DCAR_020296 Daucus carota HOM05D004719 ORTHO05D005519 1.9e-58 229.9 223 58.3
Eucgr.A02672 Eucalyptus grandis HOM05D004719 ORTHO05D005519 3.2e-58 229.2 189 61.9
CANSAT21G2536 Cannabis sativa HOM05D004719 ORTHO05D005519 4.2e-58 228.8 220 60.9
PGR142G1718 Punica granatum HOM05D004719 ORTHO05D005519 4.2e-58 228.8 232 58.6
Lj1g0014949 Lotus japonicus HOM05D004719 ORTHO05D005519 5.5e-58 228.4 231 55.4
Aa31LG3G9210 Aethionema arabicum HOM05D004719 ORTHO05D005519 9.4e-58 227.6 230 55.2
Ah.07g206120 Amaranthus hybridus HOM05D004719 ORTHO05D005519 1.2e-57 227.3 234 56.8
A03p15190 Brassica napus HOM05D004719 ORTHO05D005519 1.6e-57 226.9 233 56.7
AL8G28040 Arabidopsis lyrata HOM05D004719 ORTHO05D005519 6.1e-57 224.9 240 54.2
BraA03t10813Z Brassica rapa HOM05D004719 ORTHO05D005519 8.0e-57 224.6 233 56.2
COL.COLO4_08254 Corchorus olitorius HOM05D004719 ORTHO05D005519 1.0e-56 224.2 156 71.2
Lsat_1_v5_gn_2_134381 Lactuca sativa HOM05D004719 ORTHO05D005519 1.0e-56 224.2 229 53.7
arahy.Tifrunner.gnm1.ann1.YXX8CM Arachis hypogaea HOM05D004719 ORTHO05D005519 1.8e-56 223.4 215 60.0
Peaxi162Scf00904g00473 Petunia axillaris HOM05D004719 ORTHO05D005519 1.8e-56 223.4 231 52.4
Sc13g0009490 Simmondsia chinensis HOM05D004719 ORTHO05D005519 5.2e-56 221.9 152 72.4
Phvul.008G159900 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 6.7e-56 221.5 229 57.2
PGSC0003DMG400009067 Solanum tuberosum HOM05D004719 ORTHO05D005519 2.6e-55 219.5 237 52.7
Gohir.A09G183300 Gossypium hirsutum HOM05D004719 ORTHO05D005519 3.3e-55 219.2 213 55.9
Lalb_Chr23g0271411 Lupinus albus HOM05D004719 ORTHO05D005519 3.3e-55 219.2 237 54.4
BcaNung06632 Brassica carinata HOM05D004719 ORTHO05D005519 4.4e-55 218.8 230 55.7
C03p17720 Brassica napus HOM05D004719 ORTHO05D005519 4.4e-55 218.8 230 55.7
Potri.015G023600 Populus trichocarpa HOM05D004719 ORTHO05D005519 5.7e-55 218.4 232 53.4
THA.LOC104811935 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 5.7e-55 218.4 237 54.9
Gohir.D09G178000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 7.4e-55 218.0 207 56.5
CARHR266390 Cardamine hirsuta HOM05D004719 ORTHO05D005519 9.7e-55 217.6 245 52.7
Solyc03g007520.3 Solanum lycopersicum HOM05D004719 ORTHO05D005519 9.7e-55 217.6 231 54.1
Sopen03g003480 Solanum pennellii HOM05D004719 ORTHO05D005519 2.2e-54 216.5 231 53.7
HanXRQChr14g0462731 Helianthus annuus HOM05D004719 ORTHO05D005519 3.7e-54 215.7 234 53.4
Glyma.04G239200 Glycine max HOM05D004719 ORTHO05D005519 6.3e-54 214.9 228 52.6
BolC3t14182H Brassica oleracea HOM05D004719 ORTHO05D005519 8.2e-54 214.5 242 53.7
Gorai.006G200100 Gossypium raimondii HOM05D004719 ORTHO05D005519 8.2e-54 214.5 207 56.0
AT5G53330 Arabidopsis thaliana HOM05D004719 ORTHO05D005519 1.4e-53 213.8 243 54.3
PGSC0003DMG400028901 Solanum tuberosum HOM05D004719 ORTHO05D005519 1.4e-53 213.8 235 52.8
PGR042G1451 Punica granatum HOM05D004719 ORTHO05D005519 4.1e-53 212.2 224 53.6
BcaB08g35695 Brassica carinata HOM05D004719 ORTHO05D005519 9.1e-53 211.1 232 53.4
MSTRG.27052 Avicennia marina HOM05D004719 ORTHO05D005519 5.9e-52 208.4 245 49.0
Peaxi162Scf00618g00530 Petunia axillaris HOM05D004719 ORTHO05D005519 5.9e-52 208.4 151 66.2
ATR0661G055 Amborella trichopoda HOM05D004719 ORTHO05D005519 7.7e-52 208.0 230 53.5
MBI06_g04286_MAGBIO Magnolia biondii HOM05D004719 ORTHO05D005519 7.7e-52 208.0 233 54.5
ECA238G1719 Erigeron canadensis HOM05D000316 ORTHO05D001978 2.9e-51 206.1 211 53.6
CAN.G108.16 Capsicum annuum HOM05D004719 ORTHO05D005519 2.5e-50 203.0 210 51.9
BcaC01g06246 Brassica carinata HOM05D004719 ORTHO05D005519 4.2e-50 202.2 207 57.0
A10p10840 Brassica napus HOM05D004719 ORTHO05D005519 4.2e-50 202.2 237 49.4
HPP92_008641 Vanilla planifolia HOM05D004719 ORTHO05D005519 4.2e-50 202.2 247 49.0
BraA10t43168Z Brassica rapa HOM05D004719 ORTHO05D005519 5.5e-50 201.8 240 48.3
Glyma.06G124600 Glycine max HOM05D004719 ORTHO05D005519 5.5e-50 201.8 228 51.3
Psat5g080520 Pisum sativum HOM05D004719 ORTHO05D005519 5.5e-50 201.8 216 54.2
CAN.G204.6 Capsicum annuum HOM05D004719 ORTHO05D005519 9.4e-50 201.1 230 50.9
Phvul.009G136700 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 9.4e-50 201.1 228 50.0
C09p43180 Brassica napus HOM05D004719 ORTHO05D005519 1.6e-49 200.3 241 49.0
BcaC04g20465 Brassica carinata HOM05D004719 ORTHO05D005519 8.0e-49 198.0 241 48.5
Lj1C1011G7 Lonicera japonica HOM05D004719 ORTHO05D005519 8.0e-49 198.0 129 75.2
Medtr3g090640 Medicago truncatula HOM05D004719 ORTHO05D005519 1.0e-48 197.6 148 66.2
BolC9t57191H Brassica oleracea HOM05D004719 ORTHO05D005519 2.3e-48 196.4 247 47.4
HanXRQChr07g0207131 Helianthus annuus HOM05D004719 ORTHO05D005519 3.4e-47 192.6 228 50.0
PGR142G4196 Punica granatum HOM05D004719 ORTHO05D005519 1.7e-46 190.3 231 52.8
VMungo1309G2489 Vigna mungo HOM05D004719 ORTHO05D005519 7.0e-45 184.9 202 50.0
Actinidia34185 Actinidia chinensis HOM05D004719 ORTHO05D005519 1.2e-44 184.1 145 62.8
BcaNung07347 Brassica carinata HOM05D004719 ORTHO05D005519 3.5e-44 182.6 172 55.8
Ca_16667_v3 Cicer arietinum L. HOM05D004719 ORTHO05D005519 7.7e-44 181.4 230 47.8
GSVIVG01028725001 Vitis vinifera HOM05D004719 ORTHO05D005519 1.0e-43 181.0 144 66.0
CDE08G1019 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 1.3e-43 180.6 236 47.9
FAN06G1194 Fragaria x ananassa HOM05D004719 ORTHO05D005519 2.3e-40 169.9 154 57.8
Os06g0160400 Oryza sativa ssp. japonica HOM05D004719 ORTHO05D005519 5.2e-40 168.7 252 41.3
TPR.G33870 Trifolium pratense HOM05D004719 ORTHO05D005519 1.7e-38 163.7 213 47.4
Zm00001eb376120 Zea mays HOM05D004719 ORTHO05D005519 4.1e-37 159.1 251 44.2
CDE02G1124 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 5.4e-37 158.7 237 44.3
VMungo0647G2259 Vigna mungo HOM05D004719 ORTHO05D005519 3.6e-33 146.0 128 58.6
Mapoly0050s0076 Marchantia polymorpha HOM05D004719 ORTHO05D005519 2.0e-31 140.2 235 39.6
SEGI_18632 Sequoiadendron giganteum HOM05D004719 ORTHO05D005519 7.5e-31 138.3 165 50.3
AagrBONN_evm.TU.Sc2ySwM_340.345 Anthoceros agrestis HOM05D004719 ORTHO05D005519 1.1e-29 134.4 207 41.1
Pp3c1_11420 Physcomitrium patens HOM05D004719 ORTHO05D005519 8.9e-24 114.8 235 37.4
Dinv28349 Davidia involucrata HOM05D004719 ORTHO05D005519 3.7e-22 109.4 87 62.1
FAN18G3526 Fragaria x ananassa HOM05D006854 ORTHO05D210570 2.7e-20 103.2 74 70.3
BcaC01g06237 Brassica carinata HOM05D001465 ORTHO05D001434 7.8e-20 101.7 171 45.6
C03p17810 Brassica napus HOM05D004719 ORTHO05D005519 3.3e-18 96.3 200 40.5
QL04p064474 Quercus lobata HOM05D000013 ORTHO05D000011 3.3e-18 96.3 56 73.2
FvH4_7g16570 Fragaria vesca HOM05D004719 ORTHO05D005519 6.2e-17 92.0 56 76.8
FAN01G1848 Fragaria x ananassa HOM05D002077 ORTHO05D000818 1.8e-16 90.5 54 79.6
BolC3t14188H Brassica oleracea HOM05D004719 ORTHO05D005519 1.9e-13 80.5 94 52.1
Solyc06g036500.1 Solanum lycopersicum HOM05D004719 ORTHO05D005519 6.6e-11 72.0 114 40.4
FvH4_6g34200 Fragaria vesca HOM05D004719 ORTHO05D005519 5.6e-10 68.9 43 74.4
FAN16G3662 Fragaria x ananassa HOM05D004719 ORTHO05D005519 2.1e-09 67.0 35 85.7
CDE09G0250 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 8.1e-09 65.1 48 58.3
CBR_g83324 Chara braunii HOM05D004719 ORTHO05D005519 4.0e-08 62.8 73 41.1
CBR_g84869 Chara braunii HOM05D004719 ORTHO05D005519 3.4e-07 59.7 51 58.8
Hund30245 Selenicereus undatus HOM05D004719 ORTHO05D005519 4.4e-07 59.3 100 43.0
MCO03G325 Micromonas commoda HOM05D004719 ORTHO05D005519 1.3e-06 57.8 136 36.0
FAN06G3132 Fragaria x ananassa HOM05D004719 ORTHO05D005519 2.9e-06 56.6 40 67.5


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