Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 4.7e-120 434.9 275 100.0
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 1.4e-79 300.4 278 76.3
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 1.9e-68 263.5 280 71.8
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 1.7e-66 256.9 285 70.9
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 4.8e-64 248.8 283 68.6
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 2.4e-63 246.5 283 68.2
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 4.6e-59 232.3 284 65.5
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.8e-55 220.3 269 66.9
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 7.6e-54 214.9 282 64.2
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 8.7e-50 201.4 279 62.4
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 4.8e-48 195.7 281 61.6
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 6.2e-48 195.3 279 62.4
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 2.9e-45 186.4 155 69.0
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 7.9e-43 178.3 279 60.6
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 2.3e-42 176.8 290 59.3
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 5.7e-41 172.2 276 61.2
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 8.2e-40 168.3 285 57.9
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 1.8e-39 167.2 284 57.7
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 3.1e-39 166.4 285 57.5
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 4.1e-39 166.0 277 49.8
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 5.3e-39 165.6 285 57.5
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 6.9e-39 165.2 283 57.2
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 2.6e-38 163.3 278 58.6
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 1.0e-37 161.4 280 57.1
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 1.0e-37 161.4 277 59.2
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 1.3e-37 161.0 281 59.4
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 3.8e-37 159.5 279 58.8
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 5.0e-37 159.1 275 58.9
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 8.4e-37 158.3 284 58.5
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 8.4e-37 158.3 285 56.5
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 1.9e-36 157.1 277 58.5
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 7.2e-36 155.2 277 57.8
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 2.1e-35 153.7 275 37.1
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 2.7e-35 153.3 284 57.4
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 2.7e-35 153.3 284 55.6
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 3.5e-35 152.9 238 58.8
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 4.6e-35 152.5 281 56.9
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 1.3e-34 151.0 285 56.8
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 2.3e-34 150.2 278 55.4
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 3.0e-34 149.8 288 57.6
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 3.0e-34 149.8 318 51.3
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 6.7e-34 148.7 278 56.5
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 1.9e-33 147.1 241 62.7
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 2.5e-33 146.7 282 56.7
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 5.7e-33 145.6 284 55.3
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 9.7e-33 144.8 280 56.1
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 4.8e-32 142.5 287 55.4
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 4.8e-32 142.5 279 55.2
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 4.8e-32 142.5 274 55.8
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 6.3e-32 142.1 264 56.1
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 1.4e-31 141.0 287 55.4
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 2.4e-31 140.2 289 54.7
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 3.1e-31 139.8 281 54.4
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 6.9e-31 138.7 280 54.6
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 1.2e-30 137.9 285 53.0
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 1.5e-30 137.5 273 56.0
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 7.7e-30 135.2 281 52.3
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 1.0e-29 134.8 280 51.4
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 2.9e-29 133.3 282 53.9
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 5.0e-29 132.5 264 53.4
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 5.0e-29 132.5 273 50.2
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 1.4e-28 131.0 240 60.8
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 1.4e-28 131.0 287 53.3
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 1.9e-28 130.6 277 54.2
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 3.2e-28 129.8 250 56.8
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 4.6e-27 125.9 280 53.6
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 1.0e-26 124.8 277 39.4
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 1.4e-26 124.4 275 52.4
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 3.9e-26 122.9 280 52.5
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 8.8e-26 121.7 274 48.9
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 1.1e-25 121.3 149 57.0
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 3.3e-25 119.8 292 51.7
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 5.7e-25 119.0 281 54.4
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 9.7e-25 118.2 289 51.2
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 1.7e-24 117.5 288 51.0
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 2.2e-24 117.1 309 39.2
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 4.8e-24 115.9 113 54.9
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 6.3e-24 115.5 284 47.2
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 1.1e-23 114.8 307 40.4
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 6.9e-23 112.1 273 52.7
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 1.2e-22 111.3 97 59.8
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 1.2e-22 111.3 97 59.8
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 2.6e-22 110.2 149 53.7
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 5.9e-22 109.0 239 55.6
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 5.9e-22 109.0 287 51.2
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 1.1e-20 104.8 282 51.4
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 2.5e-20 103.6 282 51.4
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 4.2e-20 102.8 128 46.1
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 1.8e-18 97.4 300 45.7
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 1.1e-17 94.7 150 47.3
Dinv24556 Davidia involucrata HOM05D000368 ORTHO05D009348 2.6e-17 93.6 184 59.2
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 2.6e-17 93.6 285 48.4
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 3.3e-17 93.2 141 41.1
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 1.7e-16 90.9 101 49.5
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 6.3e-16 89.0 274 49.3
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 1.1e-15 88.2 274 49.3
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 1.1e-15 88.2 291 43.6
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 1.4e-15 87.8 293 47.1
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 1.8e-15 87.4 274 48.5
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 3.8e-13 79.7 106 44.3
Mapoly0006s0064 Marchantia polymorpha HOM05D000368 ORTHO05D009348 1.2e-11 74.7 205 47.3
Pp3c16_20170 Physcomitrium patens HOM05D000368 ORTHO05D009348 1.5e-09 67.8 121 38.0
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 1.3e-08 64.7 199 29.6
SEGI_15321 Sequoiadendron giganteum HOM05D000368 ORTHO05D009348 6.3e-08 62.4 110 40.0
BraA10t43080Z Brassica rapa HOM05D000368 ORTHO05D009348 1.4e-07 61.2 43 55.8
A10p09970 Brassica napus HOM05D000368 ORTHO05D009348 1.6e-06 57.8 33 66.7


User provided reference genes

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