Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G047700 Prunus persica HOM05D003953 ORTHO05D004618 2.1e-48 195.3 93 100.0
MD10G1078400 Malus domestica HOM05D003953 ORTHO05D004618 1.1e-41 172.9 108 80.6
Prupe.3G125300 Prunus persica HOM05D003953 ORTHO05D004618 2.3e-39 165.2 108 75.9
RcHm_v2.0_Chr2g0128821 Rosa chinensis HOM05D003953 ORTHO05D004618 4.9e-37 157.5 108 72.2
FAN02G2926 Fragaria x ananassa HOM05D003953 ORTHO05D004618 4.1e-36 154.5 108 70.4
FvH4_7g06540 Fragaria vesca HOM05D003953 ORTHO05D004618 1.6e-35 152.5 108 70.4
FAN01G1905 Fragaria x ananassa HOM05D003953 ORTHO05D004618 1.6e-35 152.5 108 70.4
FAN10G1677 Fragaria x ananassa HOM05D003953 ORTHO05D004618 1.6e-35 152.5 108 70.4
FAN14G2908 Fragaria x ananassa HOM05D003953 ORTHO05D004618 4.6e-35 151.0 106 68.9
FAN03G1864 Fragaria x ananassa HOM05D003953 ORTHO05D004618 7.8e-35 150.2 108 69.4
FAN05G4346 Fragaria x ananassa HOM05D003953 ORTHO05D004618 3.0e-34 148.3 103 69.9
RcHm_v2.0_Chr1g0334971 Rosa chinensis HOM05D003953 ORTHO05D004618 3.0e-34 148.3 108 67.6
FAN06G2211 Fragaria x ananassa HOM05D003953 ORTHO05D004618 5.6e-33 144.1 119 63.9
MBI04_g47172_MAGBIO Magnolia biondii HOM05D003953 ORTHO05D004618 1.2e-30 136.3 104 64.4
GSVIVG01024830001 Vitis vinifera HOM05D003953 ORTHO05D004618 4.9e-29 131.0 104 60.6
FAN09G1296 Fragaria x ananassa HOM05D003953 ORTHO05D004618 6.4e-29 130.6 162 47.5
Glyma.18G281100 Glycine max HOM05D003953 ORTHO05D004618 1.9e-28 129.0 105 60.0
TWI75G1138 Tripterygium wilfordii HOM05D003953 ORTHO05D004618 5.4e-28 127.5 103 57.3
arahy.Tifrunner.gnm1.ann1.X5K85D Arachis hypogaea HOM05D003953 ORTHO05D004618 7.1e-28 127.1 104 58.7
TWI79G0904 Tripterygium wilfordii HOM05D003953 ORTHO05D004618 7.1e-28 127.1 102 57.8
Sopen06g001840 Solanum pennellii HOM05D003953 ORTHO05D004618 9.2e-28 126.7 103 58.3
Oeu042438.1 Olea europaea HOM05D003953 ORTHO05D004618 1.2e-27 126.3 103 60.2
arahy.Tifrunner.gnm1.ann1.4A8T0Q Arachis hypogaea HOM05D003953 ORTHO05D004618 2.1e-27 125.6 98 61.2
arahy.Tifrunner.gnm1.ann1.DA7VUD Arachis hypogaea HOM05D003953 ORTHO05D004618 2.1e-27 125.6 98 61.2
arahy.Tifrunner.gnm1.ann1.DBQJ9M Arachis hypogaea HOM05D003953 ORTHO05D004618 2.1e-27 125.6 98 61.2
Psat3g190320 Pisum sativum HOM05D003953 ORTHO05D004618 2.1e-27 125.6 103 59.2
PGSC0003DMG400020825 Solanum tuberosum HOM05D003953 ORTHO05D004618 2.1e-27 125.6 103 58.3
Duzib150G0459 Durio zibethinus HOM05D003953 ORTHO05D004618 2.7e-27 125.2 107 57.0
TAR369G1135 Trochodendron aralioides HOM05D003953 ORTHO05D004618 2.7e-27 125.2 103 61.2
Gohir.A03G047300 Gossypium hirsutum HOM05D003953 ORTHO05D004618 3.5e-27 124.8 107 57.0
Nitab4.5_0000880g0090 Nicotiana tabacum HOM05D003953 ORTHO05D004618 3.5e-27 124.8 103 56.3
Nitab4.5_0002405g0070 Nicotiana tabacum HOM05D003953 ORTHO05D004618 3.5e-27 124.8 103 57.3
CDE05G3507 Ceratophyllum demersum HOM05D003953 ORTHO05D004618 4.6e-27 124.4 106 58.5
CsaV3_1G035860 Cucumis sativus L. HOM05D003953 ORTHO05D004618 4.6e-27 124.4 96 60.4
Migut.M00943 Erythranthe guttata HOM05D003953 ORTHO05D004618 4.6e-27 124.4 108 58.3
Cc09_g02060 Coffea canephora HOM05D003953 ORTHO05D004618 6.0e-27 124.0 103 57.3
CsaV3_1G013120 Cucumis sativus L. HOM05D003953 ORTHO05D004618 7.8e-27 123.6 103 56.3
Dinv06204 Davidia involucrata HOM05D003953 ORTHO05D004618 7.8e-27 123.6 103 58.3
Gorai.003G126400 Gossypium raimondii HOM05D003953 ORTHO05D004618 7.8e-27 123.6 107 56.1
Lj6g0017568 Lotus japonicus HOM05D003953 ORTHO05D004618 7.8e-27 123.6 104 57.7
TPR.G4479 Trifolium pratense HOM05D003953 ORTHO05D004618 7.8e-27 123.6 103 58.3
ClCG03G002440 Citrullus lanatus HOM05D003953 ORTHO05D004618 1.0e-26 123.2 103 56.3
Duzib168G1059 Durio zibethinus HOM05D003953 ORTHO05D004618 1.0e-26 123.2 107 57.0
Gohir.D03G119900 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.0e-26 123.2 107 55.1
Sed0019378 Sechium edule HOM05D003953 ORTHO05D004618 1.0e-26 123.2 104 55.8
MSTRG.7467 Avicennia marina HOM05D003953 ORTHO05D004618 1.3e-26 122.9 103 56.3
Os12g0194700 Oryza sativa ssp. japonica HOM05D003953 ORTHO05D004618 1.3e-26 122.9 106 57.5
CANSAT54G2674 Cannabis sativa HOM05D003953 ORTHO05D004618 1.7e-26 122.5 104 57.7
Lj1g0022776 Lotus japonicus HOM05D003953 ORTHO05D004618 1.7e-26 122.5 104 56.7
Thecc.09G309300 Theobroma cacao HOM05D003953 ORTHO05D004618 1.7e-26 122.5 107 56.1
CDE05G2370 Ceratophyllum demersum HOM05D003953 ORTHO05D004618 2.3e-26 122.1 104 57.7
Medtr7g020830 Medicago truncatula HOM05D003953 ORTHO05D004618 2.3e-26 122.1 98 60.2
Gorai.004G180400 Gossypium raimondii HOM05D003953 ORTHO05D004618 3.0e-26 121.7 107 55.1
Gorai.006G047400 Gossypium raimondii HOM05D003953 ORTHO05D004618 3.0e-26 121.7 107 55.1
Ciclev10029631m.g Citrus clementina HOM05D003953 ORTHO05D004618 3.9e-26 121.3 108 56.5
ATR1136G184 Amborella trichopoda HOM05D003953 ORTHO05D004618 5.1e-26 120.9 100 59.0
SalBow1G5086 Salvia bowleyana HOM05D003953 ORTHO05D004618 5.1e-26 120.9 103 54.4
SalBow8G2167 Salvia bowleyana HOM05D003953 ORTHO05D004618 5.1e-26 120.9 103 54.4
SalBow8G3221 Salvia bowleyana HOM05D003953 ORTHO05D004618 5.1e-26 120.9 103 54.4
ClCG03G001080 Citrullus lanatus HOM05D003953 ORTHO05D004618 6.6e-26 120.6 94 59.6
Gohir.D09G041350 Gossypium hirsutum HOM05D003953 ORTHO05D004618 8.6e-26 120.2 107 54.2
Gorai.008G072300 Gossypium raimondii HOM05D003953 ORTHO05D004618 8.6e-26 120.2 107 54.2
Hma1.2p1_0274F.1_g110300 Hydrangea macrophylla HOM05D003953 ORTHO05D004618 8.6e-26 120.2 103 56.3
PGSC0003DMG400013346 Solanum tuberosum HOM05D003953 ORTHO05D004618 8.6e-26 120.2 103 55.3
CSS0034778 Camellia sinensis var. sinensis HOM05D003953 ORTHO05D004618 1.5e-25 119.4 104 54.8
Gohir.D04G155200 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.5e-25 119.4 107 55.1
Gohir.D09G041300 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.5e-25 119.4 107 54.2
Nn2g13557 Nelumbo nucifera HOM05D003953 ORTHO05D004618 1.5e-25 119.4 103 58.3
Gohir.D05G283601 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.9e-25 119.0 107 54.2
Gohir.D05G283900 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.9e-25 119.0 107 54.2
Oeu001049.1 Olea europaea HOM05D003953 ORTHO05D004618 1.9e-25 119.0 93 61.3
Phvul.008G020000 Phaseolus vulgaris HOM05D003953 ORTHO05D004618 1.9e-25 119.0 93 59.1
Zm00001eb169140 Zea mays HOM05D003953 ORTHO05D004618 1.9e-25 119.0 106 52.8
CAN.G1186.33 Capsicum annuum HOM05D003953 ORTHO05D004618 2.5e-25 118.6 103 55.3
Glyma.19G045500 Glycine max HOM05D003953 ORTHO05D004618 2.5e-25 118.6 105 53.3
vmacro03011 Vaccinium macrocarpon HOM05D003953 ORTHO05D004618 2.5e-25 118.6 100 56.0
Sopen11g006990 Solanum pennellii HOM05D003953 ORTHO05D004618 3.3e-25 118.2 103 53.4
Gorai.009G298400 Gossypium raimondii HOM05D003953 ORTHO05D004618 4.3e-25 117.9 107 54.2
Gohir.A08G112100 Gossypium hirsutum HOM05D003953 ORTHO05D004618 5.6e-25 117.5 107 54.2
Gohir.D07G180800 Gossypium hirsutum HOM05D003953 ORTHO05D004618 5.6e-25 117.5 107 53.3
HanXRQChr09g0262301 Helianthus annuus HOM05D003953 ORTHO05D004618 9.5e-25 116.7 92 62.0
Aqoxy128s009 Aquilegia oxysepala HOM05D003953 ORTHO05D004618 1.2e-24 116.3 106 56.6
ECA248G2580 Erigeron canadensis HOM05D003953 ORTHO05D004618 1.2e-24 116.3 102 59.8
Rhsim13G0075300 Rhododendron simsii HOM05D003953 ORTHO05D004618 1.6e-24 115.9 102 52.9
Sed0025309 Sechium edule HOM05D003953 ORTHO05D004618 2.8e-24 115.2 103 54.4
Solyc11g012195.1 Solanum lycopersicum HOM05D003953 ORTHO05D004618 2.8e-24 115.2 103 51.5
Hma1.2p1_0543F.1_g175312 Hydrangea macrophylla HOM05D003953 ORTHO05D004618 3.6e-24 114.8 103 54.4
Hma1.2p1_0543F.1_g175340 Hydrangea macrophylla HOM05D003953 ORTHO05D004618 3.6e-24 114.8 103 54.4
Lalb_Chr21g0317911 Lupinus albus HOM05D003953 ORTHO05D004618 3.6e-24 114.8 94 58.5
Peaxi162Scf00123g01014 Petunia axillaris HOM05D003953 ORTHO05D004618 3.6e-24 114.8 96 56.2
Potri.001G246600 Populus trichocarpa HOM05D003953 ORTHO05D004618 4.7e-24 114.4 105 54.3
TAR623G0256 Trochodendron aralioides HOM05D003953 ORTHO05D004618 4.7e-24 114.4 71 73.2
arahy.Tifrunner.gnm1.ann1.6EI814 Arachis hypogaea HOM05D003953 ORTHO05D004618 6.2e-24 114.0 70 70.0
Gohir.D07G180600 Gossypium hirsutum HOM05D003953 ORTHO05D004618 6.2e-24 114.0 107 52.3
Nitab4.5_0002142g0080 Nicotiana tabacum HOM05D003953 ORTHO05D004618 6.2e-24 114.0 103 52.4
SGA_v2.0_scaffold44G16545 Striga asiatica HOM05D003953 ORTHO05D004618 6.2e-24 114.0 103 53.4
Gohir.A06G113000 Gossypium hirsutum HOM05D003953 ORTHO05D004618 8.1e-24 113.6 107 52.3
Gohir.A06G119302 Gossypium hirsutum HOM05D003953 ORTHO05D004618 8.1e-24 113.6 107 52.3
Gohir.A12G147900 Gossypium hirsutum HOM05D003953 ORTHO05D004618 8.1e-24 113.6 107 52.3
Gohir.D04G005500 Gossypium hirsutum HOM05D003953 ORTHO05D004618 8.1e-24 113.6 107 52.3
Gohir.D07G184100 Gossypium hirsutum HOM05D003953 ORTHO05D004618 8.1e-24 113.6 107 52.3
Sabra16G0149700 Salix brachista HOM05D003953 ORTHO05D004618 8.1e-24 113.6 105 53.3
Cfa011625 Carpinus fangiana HOM05D003953 ORTHO05D004618 1.4e-23 112.8 94 58.5
CiPaw.13G084200 Carya illinoinensis HOM05D003953 ORTHO05D004618 1.4e-23 112.8 106 54.7
unitig_92.g28151 Utricularia gibba HOM05D003953 ORTHO05D004618 1.4e-23 112.8 96 58.3
SEGI_41348 Sequoiadendron giganteum HOM05D003953 ORTHO05D004618 2.3e-23 112.1 104 51.9
TPR.G3298 Trifolium pratense HOM05D003953 ORTHO05D004618 2.3e-23 112.1 70 70.0
COL.COLO4_19069 Corchorus olitorius HOM05D003953 ORTHO05D004618 3.1e-23 111.7 114 49.1
Haze_24228 Corylus avellana HOM05D003953 ORTHO05D004618 4.0e-23 111.3 94 57.4
Lsat_1_v5_gn_5_168181 Lactuca sativa HOM05D003953 ORTHO05D004618 5.2e-23 110.9 93 58.1
Manes.01G166500 Manihot esculenta HOM05D003953 ORTHO05D004618 5.2e-23 110.9 106 53.8
HPP92_011695 Vanilla planifolia HOM05D003953 ORTHO05D004618 5.2e-23 110.9 98 54.1
Cfa020872 Carpinus fangiana HOM05D003953 ORTHO05D004618 6.8e-23 110.5 94 56.4
Gorai.011G189400 Gossypium raimondii HOM05D003953 ORTHO05D004618 6.8e-23 110.5 93 55.9
THA.LOC104800713 Tarenaya hassleriana HOM05D003953 ORTHO05D004618 6.8e-23 110.5 103 51.5
Sc12g0001080 Simmondsia chinensis HOM05D003953 ORTHO05D004618 8.9e-23 110.2 103 55.3
Gohir.D11G224100 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.2e-22 109.8 95 54.7
Lalb_Chr21g0317731 Lupinus albus HOM05D003953 ORTHO05D004618 1.5e-22 109.4 104 53.8
Atru.chr3.4044 Acer truncatum HOM05D003953 ORTHO05D004618 2.6e-22 108.6 105 49.5
AUR62001716 Chenopodium quinoa HOM05D003953 ORTHO05D004618 2.6e-22 108.6 102 52.0
DCAR_015642 Daucus carota HOM05D003953 ORTHO05D004618 2.6e-22 108.6 96 54.2
Eucgr.G01038 Eucalyptus grandis HOM05D003953 ORTHO05D004618 7.6e-22 107.1 109 47.7
Gohir.A06G083400 Gossypium hirsutum HOM05D003953 ORTHO05D004618 7.6e-22 107.1 95 53.7
Ah.13g070310 Amaranthus hybridus HOM05D003953 ORTHO05D004618 9.9e-22 106.7 104 49.0
Dinv34318 Davidia involucrata HOM05D003953 ORTHO05D004618 9.9e-22 106.7 86 61.6
PGR102G1512 Punica granatum HOM05D003953 ORTHO05D004618 3.7e-21 104.8 93 53.8
VMungo1383G2014 Vigna mungo HOM05D004418 ORTHO05D005222 4.9e-21 104.4 59 74.6
Aa31LG5G6920 Aethionema arabicum HOM05D003953 ORTHO05D004618 6.4e-21 104.0 105 49.5
Hund03162 Selenicereus undatus HOM05D003953 ORTHO05D004618 8.4e-21 103.6 103 52.4
AagrBONN_evm.TU.Sc2ySwM_117.3970 Anthoceros agrestis HOM05D003953 ORTHO05D004618 1.9e-20 102.4 104 48.1
Cpa.g.sc112.95 Carica papaya HOM05D003953 ORTHO05D004618 2.4e-20 102.1 79 58.2
Phvul.004G063100 Phaseolus vulgaris HOM05D003953 ORTHO05D004618 4.1e-20 101.3 97 49.5
Haze_19301 Corylus avellana HOM05D003953 ORTHO05D004618 2.1e-19 99.0 61 68.9
AagrBONN_evm.TU.Sc2ySwM_368.2434 Anthoceros agrestis HOM05D003953 ORTHO05D004618 2.7e-19 98.6 104 47.1
Hund04903 Selenicereus undatus HOM05D003953 ORTHO05D004618 4.6e-19 97.8 94 50.0
AagrBONN_evm.TU.Sc2ySwM_295.3 Anthoceros agrestis HOM05D003953 ORTHO05D004618 7.8e-19 97.1 104 47.1
EL10Ac7g16096 Beta vulgaris HOM05D003953 ORTHO05D004618 7.8e-19 97.1 69 60.9
Os11g0218100 Oryza sativa ssp. japonica HOM05D003953 ORTHO05D004618 1.0e-18 96.7 88 58.0
Pp3c3_11180 Physcomitrium patens HOM05D003953 ORTHO05D004618 1.7e-18 95.9 105 44.8
AagrBONN_evm.TU.Sc2ySwM_287.2 Anthoceros agrestis HOM05D003953 ORTHO05D004618 2.3e-18 95.5 104 46.2
AagrBONN_evm.TU.Sc2ySwM_26.4 Anthoceros agrestis HOM05D003953 ORTHO05D004618 5.1e-18 94.4 102 46.1
AUR62020054 Chenopodium quinoa HOM05D003953 ORTHO05D004618 6.6e-18 94.0 68 58.8
BcaB02g10260 Brassica carinata HOM05D003953 ORTHO05D004618 1.1e-17 93.2 94 47.9
C04p21300 Brassica napus HOM05D003953 ORTHO05D004618 1.5e-17 92.8 94 47.9
BolC4t23659H Brassica oleracea HOM05D003953 ORTHO05D004618 1.5e-17 92.8 94 47.9
Eucgr.G01035 Eucalyptus grandis HOM05D003953 ORTHO05D004618 1.5e-17 92.8 63 63.5
A05p15860 Brassica napus HOM05D003953 ORTHO05D004618 1.9e-17 92.4 97 45.4
AL4G24250 Arabidopsis lyrata HOM05D003953 ORTHO05D004618 2.5e-17 92.0 98 44.9
Carub.0004s1059 Capsella rubella HOM05D003953 ORTHO05D004618 4.3e-17 91.3 93 48.4
Sp4g12270 Schrenkiella parvula HOM05D003953 ORTHO05D004618 4.3e-17 91.3 97 45.4
Thhalv10017434m.g Eutrema salsugineum HOM05D003953 ORTHO05D004618 9.6e-17 90.1 121 40.5
AT2G29540 Arabidopsis thaliana HOM05D003953 ORTHO05D004618 1.6e-16 89.4 93 46.2
PSO384G4465 Papaver somniferum HOM05D003953 ORTHO05D004618 4.7e-16 87.8 103 44.7
SMO228G0103 Selaginella moellendorffii HOM05D003953 ORTHO05D004618 3.1e-15 85.1 68 51.5
PSO339G2392 Papaver somniferum HOM05D003953 ORTHO05D004618 4.0e-15 84.7 104 44.2
C04p58680 Brassica napus HOM05D003953 ORTHO05D004618 1.5e-14 82.8 94 43.6
CARHR122880 Cardamine hirsuta HOM05D003953 ORTHO05D004618 1.5e-14 82.8 97 42.3
Mapoly0064s0065 Marchantia polymorpha HOM05D003953 ORTHO05D004618 1.5e-14 82.8 73 49.3
A04p22530 Brassica napus HOM05D003953 ORTHO05D004618 2.2e-13 79.0 59 57.6
BraA04t17798Z Brassica rapa HOM05D003953 ORTHO05D004618 2.2e-13 79.0 59 57.6
Mapoly0079s0034 Marchantia polymorpha HOM05D003953 ORTHO05D004618 6.4e-13 77.4 70 47.1
BcaC02g08078 Brassica carinata HOM05D003953 ORTHO05D004618 5.4e-12 74.3 52 59.6
MCO07G039 Micromonas commoda HOM05D003953 ORTHO05D004618 2.7e-11 72.0 78 43.6
FvH4_6g26980 Fragaria vesca HOM05D003953 ORTHO05D004618 3.5e-11 71.6 62 58.1
Peaxi162Scf00025g01315 Petunia axillaris HOM05D003953 ORTHO05D004618 1.0e-10 70.1 88 43.2
Cre12.g484100 Chlamydomonas reinhardtii HOM05D003953 ORTHO05D004618 2.3e-10 68.9 70 44.3
Actinidia25120 Actinidia chinensis HOM05D003953 ORTHO05D004618 5.1e-10 67.8 63 57.1
Phvul.001G016450 Phaseolus vulgaris HOM05D003953 ORTHO05D004618 3.3e-09 65.1 60 55.0
Gohir.D02G136950 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.6e-08 62.8 65 50.8
Gorai.001G172100 Gossypium raimondii HOM05D003953 ORTHO05D004618 2.1e-08 62.4 60 53.3
SMO351G0643 Selaginella moellendorffii HOM05D003953 ORTHO05D004618 1.5e-06 56.2 27 77.8
Aqoxy1G00773 Aquilegia oxysepala HOM05D003953 ORTHO05D004618 3.4e-06 55.1 34 70.6
PRCOL_00001819 Prasinoderma coloniale HOM05D003953 ORTHO05D004618 7.6e-06 53.9 57 38.6


User provided reference genes

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