Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 2.1e-141 505.8 262 100.0
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 8.1e-122 440.7 265 83.0
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 5.6e-115 417.9 265 81.5
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 3.7e-114 415.2 261 81.2
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 3.1e-113 412.1 258 81.4
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 3.1e-113 412.1 258 81.4
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 1.3e-111 406.8 251 81.3
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 2.2e-111 406.0 257 79.8
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 6.4e-111 404.4 258 78.7
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 3.0e-108 395.6 254 77.2
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 2.5e-107 392.5 232 82.8
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 3.3e-107 392.1 257 78.2
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 9.6e-107 390.6 231 83.5
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 6.2e-106 387.9 229 81.7
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 8.2e-106 387.5 234 80.3
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 1.1e-105 387.1 232 80.6
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 1.8e-105 386.3 229 82.5
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 4.0e-105 385.2 259 73.4
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 5.3e-105 384.8 233 82.0
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 6.9e-105 384.4 261 73.9
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 1.5e-104 383.3 259 76.1
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 1.5e-104 383.3 260 73.8
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 2.0e-104 382.9 249 75.5
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 2.6e-104 382.5 234 79.5
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 3.4e-104 382.1 232 79.7
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 5.8e-104 381.3 260 74.6
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 7.6e-104 380.9 257 75.9
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 1.7e-103 379.8 230 80.9
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 2.2e-103 379.4 259 76.4
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 2.9e-103 379.0 260 74.2
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 2.9e-103 379.0 262 74.0
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 2.9e-103 379.0 232 81.0
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 3.8e-103 378.6 259 73.7
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 4.9e-103 378.3 259 74.9
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 1.1e-102 377.1 263 73.4
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 1.9e-102 376.3 264 72.7
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 3.2e-102 375.6 259 73.0
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 3.2e-102 375.6 245 75.9
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 5.5e-102 374.8 234 79.5
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 5.5e-102 374.8 233 79.4
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 7.1e-102 374.4 257 72.4
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 9.3e-102 374.0 257 76.3
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 1.2e-101 373.6 257 72.4
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 1.6e-101 373.2 233 80.3
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 2.1e-101 372.9 233 78.5
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 4.6e-101 371.7 232 76.7
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 6.0e-101 371.3 232 79.3
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 7.9e-101 370.9 253 71.1
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 3.0e-100 369.0 223 83.4
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 3.0e-100 369.0 245 75.5
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 3.9e-100 368.6 233 77.3
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 1.1e-99 367.1 243 74.5
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 1.5e-99 366.7 240 75.4
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 1.9e-99 366.3 241 75.9
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 2.5e-99 365.9 257 71.2
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 3.3e-99 365.5 286 68.2
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 5.7e-99 364.8 240 75.0
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 1.3e-98 363.6 270 67.8
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 1.6e-98 363.2 231 77.9
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 4.8e-98 361.7 242 74.8
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 6.3e-98 361.3 286 66.4
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 1.1e-97 360.5 271 67.2
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 1.8e-97 359.8 261 69.3
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 3.1e-97 359.0 232 77.2
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 1.2e-96 357.1 232 76.3
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 1.5e-96 356.7 245 72.2
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 1.5e-96 356.7 245 72.2
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 3.4e-96 355.5 232 76.3
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 3.4e-96 355.5 245 73.1
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 3.4e-96 355.5 239 73.2
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 4.5e-96 355.1 267 67.4
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 7.7e-96 354.4 247 72.9
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 7.7e-96 354.4 232 75.9
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 1.0e-95 354.0 242 74.0
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.7e-95 353.2 233 74.2
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 6.5e-95 351.3 242 73.1
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 6.5e-95 351.3 242 73.1
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.1e-94 350.5 232 76.3
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.1e-94 350.5 232 76.3
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 1.4e-94 350.1 232 75.4
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 2.1e-93 346.3 228 72.4
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 6.1e-93 344.7 234 73.9
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.0e-92 344.0 213 80.8
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 3.9e-92 342.0 235 70.6
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 4.3e-91 338.6 325 56.6
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 5.7e-91 338.2 211 77.7
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 7.4e-91 337.8 209 78.9
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 1.3e-90 337.0 214 78.5
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 8.2e-90 334.3 219 76.7
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 1.8e-89 333.2 232 69.8
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 5.3e-89 331.6 302 59.3
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 1.2e-88 330.5 236 69.9
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 2.0e-88 329.7 209 76.6
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 4.5e-88 328.6 203 81.3
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 4.5e-88 328.6 236 69.5
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 7.7e-88 327.8 244 68.4
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 1.7e-87 326.6 229 72.9
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 3.8e-87 325.5 214 76.6
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 3.2e-86 322.4 212 76.9
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 2.2e-82 309.7 200 79.5
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 3.0e-76 289.3 305 53.4
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 4.4e-75 285.4 198 70.7
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 1.3e-71 273.9 167 83.2
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 2.5e-70 269.6 227 62.6
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 1.4e-68 263.8 175 75.4
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 2.7e-64 249.6 229 53.7
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 3.7e-58 229.2 235 50.2
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 1.8e-57 226.9 225 52.4
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 3.5e-56 222.6 137 76.6
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 4.2e-54 215.7 133 78.9
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 6.8e-52 208.4 231 49.8
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.8e-50 203.0 137 73.0
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 5.4e-49 198.7 146 70.5
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 4.5e-48 195.7 146 69.2
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 2.3e-47 193.4 146 68.5
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 4.0e-44 182.6 114 78.1
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 9.8e-43 177.9 175 54.9
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 5.0e-39 165.6 123 65.9
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.9e-38 163.7 96 79.2
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 1.6e-32 144.1 75 90.7
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 2.7e-32 143.3 97 75.3
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 2.3e-31 140.2 96 74.0
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.2e-24 117.9 88 64.8
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.7e-18 97.4 97 58.8
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 3.9e-15 86.3 114 47.4
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 5.1e-15 85.9 48 79.2
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 3.3e-14 83.2 114 46.5
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 4.4e-11 72.8 171 29.2


User provided reference genes

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