Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G008500 Prunus persica HOM05D006654 ORTHO05D008201 1.7e-39 165.6 88 100.0
CANSAT80G1342 Cannabis sativa HOM05D006654 ORTHO05D008201 4.9e-39 164.1 88 98.9
CiPaw.12G042200 Carya illinoinensis HOM05D006654 ORTHO05D008201 4.9e-39 164.1 88 98.9
Haze_07229 Corylus avellana HOM05D006654 ORTHO05D008201 4.9e-39 164.1 88 98.9
FvH4_7g00630 Fragaria vesca HOM05D006654 ORTHO05D008201 4.9e-39 164.1 88 98.9
FAN01G0962 Fragaria x ananassa HOM05D006654 ORTHO05D008201 4.9e-39 164.1 88 98.9
FAN03G1885 Fragaria x ananassa HOM05D006654 ORTHO05D008201 4.9e-39 164.1 88 98.9
FAN06G4528 Fragaria x ananassa HOM05D006654 ORTHO05D008201 4.9e-39 164.1 88 98.9
FAN10G2487 Fragaria x ananassa HOM05D006654 ORTHO05D008201 4.9e-39 164.1 88 98.9
Gohir.D03G115000 Gossypium hirsutum HOM05D006654 ORTHO05D008201 4.9e-39 164.1 88 98.9
Gorai.003G121200 Gossypium raimondii HOM05D006654 ORTHO05D008201 4.9e-39 164.1 88 98.9
Hma1.2p1_0014F.1_g009560 Hydrangea macrophylla HOM05D006654 ORTHO05D008201 4.9e-39 164.1 88 98.9
Prupe.4G287600 Prunus persica HOM05D006654 ORTHO05D008201 4.9e-39 164.1 88 98.9
RcHm_v2.0_Chr1g0314831 Rosa chinensis HOM05D006654 ORTHO05D008201 4.9e-39 164.1 88 98.9
Thecc.03G127500 Theobroma cacao HOM05D006654 ORTHO05D008201 4.9e-39 164.1 88 98.9
GSVIVG01008527001 Vitis vinifera HOM05D006654 ORTHO05D008201 4.9e-39 164.1 88 98.9
Duzib068G1280 Durio zibethinus HOM05D006654 ORTHO05D008201 6.4e-39 163.7 88 97.7
Os07g0295200 Oryza sativa ssp. japonica HOM05D006654 ORTHO05D008201 6.4e-39 163.7 88 97.7
Glyma.20G249100 Glycine max HOM05D006654 ORTHO05D008201 8.4e-39 163.3 88 97.7
TWI23G1026 Tripterygium wilfordii HOM05D006654 ORTHO05D008201 8.4e-39 163.3 88 96.6
arahy.Tifrunner.gnm1.ann1.S79YT6 Arachis hypogaea HOM05D006654 ORTHO05D008201 1.1e-38 162.9 88 97.7
FAN01G2458 Fragaria x ananassa HOM05D006654 ORTHO05D008201 1.1e-38 162.9 88 97.7
MBI07_g34629_MAGBIO Magnolia biondii HOM05D006654 ORTHO05D008201 1.1e-38 162.9 88 97.7
Manes.06G118600 Manihot esculenta HOM05D006654 ORTHO05D008201 1.1e-38 162.9 88 97.7
Manes.14G052100 Manihot esculenta HOM05D006654 ORTHO05D008201 1.1e-38 162.9 88 97.7
Phvul.007G001300 Phaseolus vulgaris HOM05D006654 ORTHO05D008201 1.1e-38 162.9 88 97.7
Potri.012G096500 Populus trichocarpa HOM05D006654 ORTHO05D008201 1.1e-38 162.9 88 97.7
Prupe.1G190000 Prunus persica HOM05D006654 ORTHO05D008201 1.1e-38 162.9 88 97.7
VMungo0720G2310 Vigna mungo HOM05D006654 ORTHO05D008201 1.1e-38 162.9 88 97.7
Lalb_Chr06g0164681 Lupinus albus HOM05D006654 ORTHO05D008201 1.4e-38 162.5 88 96.6
Nn3g16497 Nelumbo nucifera HOM05D006654 ORTHO05D008201 1.4e-38 162.5 88 96.6
Nn4g22349 Nelumbo nucifera HOM05D006654 ORTHO05D008201 1.4e-38 162.5 88 96.6
TAR371G0211 Trochodendron aralioides HOM05D006654 ORTHO05D008201 1.4e-38 162.5 88 96.6
ClCG03G003720 Citrullus lanatus HOM05D006654 ORTHO05D008201 1.9e-38 162.2 88 97.7
CsaV3_1G009610 Cucumis sativus L. HOM05D006654 ORTHO05D008201 1.9e-38 162.2 88 97.7
QL10p003811 Quercus lobata HOM05D006654 ORTHO05D008201 1.9e-38 162.2 87 97.7
Sed0016483 Sechium edule HOM05D006654 ORTHO05D008201 1.9e-38 162.2 88 97.7
Ciclev10021838m.g Citrus clementina HOM05D006654 ORTHO05D008201 2.4e-38 161.8 88 97.7
Lj5g0001059 Lotus japonicus HOM05D006654 ORTHO05D008201 2.4e-38 161.8 88 96.6
MD02G1316100 Malus domestica HOM05D006654 ORTHO05D008201 2.4e-38 161.8 88 97.7
MD07G1005800 Malus domestica HOM05D006654 ORTHO05D008201 2.4e-38 161.8 88 97.7
Actinidia08864 Actinidia chinensis HOM05D006654 ORTHO05D008201 3.2e-38 161.4 88 96.6
COL.COLO4_28092 Corchorus olitorius HOM05D006654 ORTHO05D008201 5.4e-38 160.6 88 96.6
SGA_v2.0_scaffold161G37776 Striga asiatica HOM05D006654 ORTHO05D008201 7.1e-38 160.2 88 95.5
Aqoxy5G03402 Aquilegia oxysepala HOM05D006654 ORTHO05D008201 9.3e-38 159.8 88 94.3
CSS0035351 Camellia sinensis var. sinensis HOM05D006654 ORTHO05D008201 9.3e-38 159.8 88 95.5
Ca_11428_v3 Cicer arietinum L. HOM05D006654 ORTHO05D008201 9.3e-38 159.8 88 95.5
Ca_29862_v3 Cicer arietinum L. HOM05D006654 ORTHO05D008201 9.3e-38 159.8 88 95.5
Potri.015G094300 Populus trichocarpa HOM05D006654 ORTHO05D008201 9.3e-38 159.8 88 95.5
TPR.G39480 Trifolium pratense HOM05D006654 ORTHO05D008201 9.3e-38 159.8 88 95.5
Lsat_1_v5_gn_4_76920 Lactuca sativa HOM05D006654 ORTHO05D008201 1.2e-37 159.5 88 95.5
AUR62025924 Chenopodium quinoa HOM05D006654 ORTHO05D008201 1.6e-37 159.1 88 95.5
AUR62029635 Chenopodium quinoa HOM05D006654 ORTHO05D008201 1.6e-37 159.1 88 95.5
ECA232G0809 Erigeron canadensis HOM05D006654 ORTHO05D008201 1.6e-37 159.1 88 94.3
Rhsim12G0173900 Rhododendron simsii HOM05D006654 ORTHO05D008201 1.6e-37 159.1 88 96.6
THA.LOC104818189 Tarenaya hassleriana HOM05D006654 ORTHO05D008201 1.6e-37 159.1 88 95.5
Aa31LG1G18600 Aethionema arabicum HOM05D006654 ORTHO05D008201 2.1e-37 158.7 88 95.5
CDE05G1175 Ceratophyllum demersum HOM05D006654 ORTHO05D008201 2.1e-37 158.7 88 95.5
Migut.I00498 Erythranthe guttata HOM05D006654 ORTHO05D008201 2.1e-37 158.7 88 93.2
HanXRQChr16g0497681 Helianthus annuus HOM05D006654 ORTHO05D008201 2.1e-37 158.7 88 94.3
Oeu023486.1 Olea europaea HOM05D006654 ORTHO05D008201 2.1e-37 158.7 88 93.2
AL8G40500 Arabidopsis lyrata HOM05D006654 ORTHO05D008201 2.7e-37 158.3 88 95.5
AT5G63440 Arabidopsis thaliana HOM05D006654 ORTHO05D008201 2.7e-37 158.3 88 95.5
Carub.0008s2414 Capsella rubella HOM05D006654 ORTHO05D008201 2.7e-37 158.3 88 95.5
PGR083G1205 Punica granatum HOM05D006654 ORTHO05D008201 2.7e-37 158.3 88 96.6
Sp2g26520 Schrenkiella parvula HOM05D006654 ORTHO05D008201 2.7e-37 158.3 88 95.5
MSTRG.4601 Avicennia marina HOM05D006654 ORTHO05D008201 3.5e-37 157.9 88 94.3
CARHR277290 Cardamine hirsuta HOM05D006654 ORTHO05D008201 3.5e-37 157.9 88 94.3
Thhalv10004858m.g Eutrema salsugineum HOM05D006654 ORTHO05D008201 4.6e-37 157.5 88 94.3
SEGI_01164 Sequoiadendron giganteum HOM05D006654 ORTHO05D008201 4.6e-37 157.5 88 94.3
HPP92_000346 Vanilla planifolia HOM05D006654 ORTHO05D008201 4.6e-37 157.5 88 95.5
EL10As4g23406 Beta vulgaris HOM05D006654 ORTHO05D008201 6.0e-37 157.1 88 94.3
PSO063G4350 Papaver somniferum HOM05D006654 ORTHO05D008201 7.9e-37 156.8 88 94.3
PSO782G1240 Papaver somniferum HOM05D006654 ORTHO05D008201 7.9e-37 156.8 88 94.3
SalBow1G2859 Salvia bowleyana HOM05D006654 ORTHO05D008201 7.9e-37 156.8 88 94.3
SalBow1G7869 Salvia bowleyana HOM05D006654 ORTHO05D008201 7.9e-37 156.8 88 94.3
Eucgr.F01379 Eucalyptus grandis HOM05D006654 ORTHO05D008201 1.3e-36 156.0 88 94.3
Peaxi162Scf00089g00632 Petunia axillaris HOM05D006654 ORTHO05D008201 1.3e-36 156.0 88 92.0
BcaC01g02588 Brassica carinata HOM05D006654 ORTHO05D008201 1.8e-36 155.6 85 95.3
A06p30050 Brassica napus HOM05D001045 ORTHO05D004836 1.8e-36 155.6 85 95.3
C03p63160 Brassica napus HOM05D001045 ORTHO05D004836 1.8e-36 155.6 85 95.3
BolC3t18571H Brassica oleracea HOM05D001045 ORTHO05D004836 1.8e-36 155.6 85 95.3
BraA06t25957Z Brassica rapa HOM05D001045 ORTHO05D004836 1.8e-36 155.6 85 95.3
Mapoly0061s0139 Marchantia polymorpha HOM05D006654 ORTHO05D008201 1.8e-36 155.6 88 92.0
Solyc03g111330.4 Solanum lycopersicum HOM05D006654 ORTHO05D008201 1.8e-36 155.6 88 92.0
Sopen03g030460 Solanum pennellii HOM05D006654 ORTHO05D008201 1.8e-36 155.6 88 92.0
Nitab4.5_0003282g0120 Nicotiana tabacum HOM05D006654 ORTHO05D008201 2.3e-36 155.2 88 90.9
Nitab4.5_0004750g0080 Nicotiana tabacum HOM05D006654 ORTHO05D008201 2.3e-36 155.2 88 90.9
Sc10g0010430 Simmondsia chinensis HOM05D006654 ORTHO05D008201 3.9e-36 154.5 88 92.0
CAN.G352.15 Capsicum annuum HOM05D006654 ORTHO05D008201 5.1e-36 154.1 88 90.9
PGSC0003DMG402015240 Solanum tuberosum HOM05D006654 ORTHO05D008201 5.1e-36 154.1 88 90.9
Cc04_g10050 Coffea canephora HOM05D006654 ORTHO05D008201 1.5e-35 152.5 88 92.0
Pp3c22_11190 Physcomitrium patens HOM05D006654 ORTHO05D008201 1.9e-35 152.1 88 89.8
Pp3c22_11201 Physcomitrium patens HOM05D006654 ORTHO05D008201 1.9e-35 152.1 88 89.8
Pp3c18_15000 Physcomitrium patens HOM05D006654 ORTHO05D008201 7.4e-35 150.2 86 90.7
SMO364G0616 Selaginella moellendorffii HOM05D006654 ORTHO05D008201 1.6e-34 149.1 87 89.7
BcaC04g23328 Brassica carinata HOM05D006654 ORTHO05D008201 4.8e-34 147.5 85 90.6
C09p09330 Brassica napus HOM05D006654 ORTHO05D008201 4.8e-34 147.5 85 90.6
BolC9t53845H Brassica oleracea HOM05D006654 ORTHO05D008201 4.8e-34 147.5 85 90.6
MELO3C002357.2 Cucumis melo HOM05D006654 ORTHO05D008201 4.5e-32 141.0 76 97.4
Oeu044257.1 Olea europaea HOM05D006654 ORTHO05D008201 4.6e-29 131.0 72 91.7
arahy.Tifrunner.gnm1.ann1.653AWM Arachis hypogaea HOM05D006654 ORTHO05D008201 1.0e-28 129.8 69 98.6
Cpa.g.sc13.133 Carica papaya HOM05D006654 ORTHO05D008201 3.0e-28 128.3 69 95.7
Sabra15G0115700 Salix brachista HOM05D006654 ORTHO05D008201 5.1e-28 127.5 72 91.7
ATR0561G261 Amborella trichopoda HOM05D006654 ORTHO05D008201 8.7e-28 126.7 78 87.2
Medtr1g117000 Medicago truncatula HOM05D001235 ORTHO05D005684 8.7e-28 126.7 68 97.1
vmacro16672 Vaccinium macrocarpon HOM05D006654 ORTHO05D008201 1.9e-27 125.6 73 89.0
CBR_g70955 Chara braunii HOM05D006654 ORTHO05D008201 2.4e-25 118.6 69 85.5
Lj9A478G90 Lonicera japonica HOM05D006654 ORTHO05D008201 4.0e-25 117.9 84 79.8
Hund10171 Selenicereus undatus HOM05D006654 ORTHO05D008201 1.3e-23 112.8 82 78.0
BcaB04g19916 Brassica carinata HOM05D006654 ORTHO05D008201 9.3e-22 106.7 88 70.5
Atru.BG.190.p Acer truncatum HOM05D006654 ORTHO05D008201 5.1e-20 100.9 84 71.4
Lsat_1_v5_gn_6_64721 Lactuca sativa HOM05D001937 ORTHO05D003828 1.4e-17 92.8 52 88.5
Dinv11162 Davidia involucrata HOM05D006654 ORTHO05D008201 1.8e-17 92.4 59 86.4
MCO06G092 Micromonas commoda HOM05D006654 ORTHO05D008201 3.4e-16 88.2 86 51.2
Gohir.A03G052100 Gossypium hirsutum HOM05D006654 ORTHO05D008201 1.3e-15 86.3 46 97.8
Hma1.2p1_0014F.1_g009570 Hydrangea macrophylla HOM05D006654 ORTHO05D008201 1.7e-15 85.9 46 95.7
Zm00001eb305410 Zea mays HOM05D006654 ORTHO05D008201 4.2e-14 81.3 47 91.5
Pp3c19_20620 Physcomitrium patens HOM05D006654 ORTHO05D008201 7.9e-13 77.0 73 63.0
LjContig00075g0008356 Lotus japonicus HOM05D006654 ORTHO05D008201 4.3e-11 71.2 87 54.0
VMungo0720G3038 Vigna mungo HOM05D004119 ORTHO05D004797 9.7e-11 70.1 36 94.4
Cre12.g485750 Chlamydomonas reinhardtii HOM05D006654 ORTHO05D008201 2.4e-09 65.5 86 38.4
BolC5t32228H Brassica oleracea HOM05D007422 ORTHO05D009333 1.2e-08 63.2 87 37.9
Sp1g36060 Schrenkiella parvula HOM05D007422 ORTHO05D009333 1.2e-08 63.2 87 37.9
Carub.0001s3836 Capsella rubella HOM05D007422 ORTHO05D009333 2.0e-08 62.4 87 36.8
A05p20740 Brassica napus HOM05D007422 ORTHO05D009333 2.6e-08 62.0 87 36.8
BraA05t20982Z Brassica rapa HOM05D007422 ORTHO05D009333 2.6e-08 62.0 87 36.8
Aa31LG10G5060 Aethionema arabicum HOM05D007422 ORTHO05D009333 3.4e-08 61.6 87 36.8
BcaC05g27531 Brassica carinata HOM05D007422 ORTHO05D009333 3.4e-08 61.6 87 37.9
C05p35090 Brassica napus HOM05D007422 ORTHO05D009333 3.4e-08 61.6 87 37.9
AT1G49170 Arabidopsis thaliana HOM05D007422 ORTHO05D009333 7.7e-08 60.5 87 35.6
CARHR039170 Cardamine hirsuta HOM05D007422 ORTHO05D009333 7.7e-08 60.5 87 35.6
AL1G56040 Arabidopsis lyrata HOM05D007422 ORTHO05D009333 1.0e-07 60.1 87 35.6
SEGI_34968 Sequoiadendron giganteum HOM05D007422 ORTHO05D009333 1.0e-07 60.1 84 38.1
Thhalv10011860m.g Eutrema salsugineum HOM05D007422 ORTHO05D009333 2.2e-07 58.9 87 35.6
SGA_v2.0_scaffold137G35131 Striga asiatica HOM05D007422 ORTHO05D009333 5.0e-07 57.8 86 31.4
THA.LOC104821861 Tarenaya hassleriana HOM05D007422 ORTHO05D009333 5.0e-07 57.8 87 33.3
Mapoly0054s0054 Marchantia polymorpha HOM05D007422 ORTHO05D009333 6.5e-07 57.4 84 36.9
CAN.G1225.1 Capsicum annuum HOM05D003952 ORTHO05D008201 8.5e-07 57.0 45 66.7
Atru.chr4.503 Acer truncatum HOM05D007422 ORTHO05D009333 1.4e-06 56.2 84 34.5
Ah.02g122030 Amaranthus hybridus HOM05D007422 ORTHO05D009333 1.4e-06 56.2 86 33.7
PRCOL_00005389 Prasinoderma coloniale HOM05D006654 ORTHO05D008201 1.9e-06 55.8 90 36.7
Gohir.D04G029700 Gossypium hirsutum HOM05D007422 ORTHO05D009333 2.5e-06 55.5 84 34.5
Gorai.012G032800 Gossypium raimondii HOM05D007422 ORTHO05D009333 2.5e-06 55.5 84 34.5
unitig_60.g25621 Utricularia gibba HOM05D007422 ORTHO05D009333 2.5e-06 55.5 86 30.2
ATR0772G041 Amborella trichopoda HOM05D007422 ORTHO05D009333 3.2e-06 55.1 81 33.3
Hund04464 Selenicereus undatus HOM05D007422 ORTHO05D009333 4.2e-06 54.7 84 33.3
Cpa.g.sc42.105 Carica papaya HOM05D007422 ORTHO05D009333 5.5e-06 54.3 86 33.7
COL.COLO4_21895 Corchorus olitorius HOM05D007422 ORTHO05D009333 5.5e-06 54.3 84 33.3
Duzib264G1170 Durio zibethinus HOM05D007422 ORTHO05D009333 5.5e-06 54.3 84 33.3
Gohir.A05G386900 Gossypium hirsutum HOM05D007422 ORTHO05D009333 5.5e-06 54.3 84 34.5
CAN.G900.53 Capsicum annuum HOM05D007422 ORTHO05D009333 7.2e-06 53.9 81 30.9
Cfa002851 Carpinus fangiana HOM05D007422 ORTHO05D009333 7.2e-06 53.9 81 34.6
TWI75G1659 Tripterygium wilfordii HOM05D007422 ORTHO05D009333 7.2e-06 53.9 81 33.3
Aqoxy5G02143 Aquilegia oxysepala HOM05D007422 ORTHO05D009333 9.4e-06 53.5 84 33.3
HPP92_006817 Vanilla planifolia HOM05D007422 ORTHO05D009333 9.4e-06 53.5 82 32.9


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