Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 0.0e+00 1148.7 592 100.0
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 3.5e-266 921.4 590 80.3
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 1.6e-213 746.5 590 69.0
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 6.8e-209 731.1 590 65.8
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 1.2e-202 710.3 591 64.3
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 1.1e-201 707.2 666 59.0
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 5.2e-201 704.9 602 62.6
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 1.7e-199 699.9 616 61.5
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 2.2e-199 699.5 602 61.3
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 2.1e-197 693.0 592 61.7
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 2.3e-193 679.5 586 61.8
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 3.1e-193 679.1 593 62.7
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 2.6e-192 676.0 593 59.7
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 2.6e-192 676.0 588 61.1
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 2.2e-191 672.9 604 60.3
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 1.8e-185 653.3 589 58.7
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 5.2e-185 651.7 598 59.0
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 2.6e-184 649.4 585 59.5
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 1.1e-182 644.0 590 58.5
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 5.4e-182 641.7 585 58.1
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 1.6e-181 640.2 590 58.5
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.0e-180 637.5 585 57.9
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 5.1e-180 635.2 588 58.0
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 1.5e-179 633.6 619 55.1
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 2.5e-179 632.9 619 55.3
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 7.3e-179 631.3 592 58.3
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 9.6e-179 630.9 590 57.5
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 6.2e-178 628.2 619 54.8
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 1.1e-177 627.5 590 56.9
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 7.6e-176 621.3 586 56.0
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 7.6e-176 621.3 585 56.6
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 5.6e-171 605.1 636 51.3
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 7.3e-171 604.7 566 55.8
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 7.3e-171 604.7 589 55.2
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 9.6e-171 604.4 600 57.0
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 9.6e-171 604.4 591 55.2
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 2.1e-170 603.2 569 56.2
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 8.1e-170 601.3 562 55.3
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 1.4e-169 600.5 649 52.5
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 4.5e-168 595.5 588 54.4
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 1.3e-167 594.0 608 53.6
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 2.2e-167 593.2 586 54.9
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 1.1e-166 590.9 598 52.8
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 3.5e-165 585.9 619 53.0
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 1.3e-164 583.9 589 53.0
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 3.7e-162 575.9 587 52.5
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 4.8e-162 575.5 596 51.8
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.2e-157 560.8 589 51.1
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 2.7e-157 559.7 590 51.9
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 3.5e-157 559.3 591 52.5
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 6.7e-156 555.1 593 49.9
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 9.6e-155 551.2 649 47.5
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 1.6e-154 550.4 603 51.6
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 1.1e-153 547.7 591 51.8
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 1.0e-151 541.2 592 49.3
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 6.5e-151 538.5 570 50.5
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 1.1e-150 537.7 592 49.3
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 1.1e-150 537.7 517 55.7
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 2.1e-149 533.5 566 50.7
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 2.2e-146 523.5 644 46.7
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 1.2e-144 517.7 592 49.3
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 5.9e-144 515.4 597 50.8
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 7.7e-144 515.0 592 48.3
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.4e-142 510.8 372 69.1
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 4.2e-142 509.2 579 49.6
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 7.2e-142 508.4 372 69.6
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 9.7e-139 498.0 573 49.4
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.1e-137 493.0 372 68.3
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 3.2e-134 483.0 595 48.1
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 1.6e-133 480.7 601 43.4
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.6e-133 480.7 526 50.2
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 3.6e-133 479.6 578 48.4
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 1.8e-132 477.2 474 53.4
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 8.8e-132 474.9 598 47.7
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 2.6e-131 473.4 609 46.1
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 4.4e-131 472.6 578 47.8
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 5.7e-131 472.2 583 46.8
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 3.7e-130 469.5 538 48.9
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 1.5e-128 464.2 608 46.1
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 4.5e-128 462.6 584 46.1
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 5.2e-124 449.1 372 62.6
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 8.2e-122 441.8 412 57.0
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 1.4e-121 441.0 618 43.9
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 7.7e-120 435.3 607 44.0
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 1.1e-118 431.4 591 41.5
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 9.4e-118 428.3 505 45.5
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 1.8e-116 424.1 493 49.9
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 4.8e-114 416.0 490 48.8
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 1.8e-113 414.1 385 57.1
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 1.6e-112 411.0 595 42.9
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 4.5e-112 409.5 572 43.2
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 5.5e-110 402.5 405 51.1
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 2.3e-108 397.1 591 38.6
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 6.3e-106 389.0 633 39.7
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 4.0e-100 369.8 617 40.0
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 7.8e-96 355.5 331 57.7
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 3.9e-95 353.2 554 41.3
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 5.6e-94 349.4 589 38.4
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 2.7e-80 303.9 443 38.4
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 3.6e-77 293.5 281 54.4
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 3.9e-71 273.5 456 39.9
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 9.3e-65 252.3 302 47.4
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 3.9e-47 193.7 156 60.3
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 3.1e-44 184.1 502 28.9
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 8.4e-42 176.0 513 28.1
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 3.9e-39 167.2 612 26.3
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 1.1e-38 165.6 290 35.5
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 4.8e-37 160.2 569 25.0
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 3.1e-36 157.5 223 40.4
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.2e-35 155.6 513 26.1
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 2.3e-31 141.4 167 47.3
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.8e-29 134.4 88 72.7
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 5.5e-25 120.2 142 45.8
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 3.4e-19 100.9 96 57.3
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 2.6e-14 84.7 83 51.8
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 2.6e-14 84.7 129 45.0
CBR_g18678 Chara braunii HOM05D006351 ORTHO05D007796 2.6e-11 74.7 205 28.3
FvH4_6g18901 Fragaria vesca HOM05D006351 ORTHO05D007796 5.0e-10 70.5 82 51.2
Gohir.A11G232166 Gossypium hirsutum HOM05D006351 ORTHO05D007796 8.0e-08 63.2 63 49.2
Gohir.A04G102300 Gossypium hirsutum HOM05D001271 ORTHO05D007796 8.8e-07 59.7 62 48.4
Gohir.A01G131311 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.5e-06 58.9 68 45.6
Gohir.A13G118000 Gossypium hirsutum HOM05D006351 ORTHO05D007796 5.7e-06 57.0 63 46.0


User provided reference genes

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