Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 9.3e-156 553.5 282 100.0
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 7.4e-113 411.0 308 73.7
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 3.7e-112 408.7 308 73.1
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.0e-110 402.9 313 71.2
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 7.9e-107 391.0 245 83.3
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.2e-101 372.9 251 79.7
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 2.9e-101 372.5 251 79.3
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 1.1e-100 370.5 246 80.5
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 8.8e-98 360.9 241 78.8
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 3.2e-92 342.4 251 72.9
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 1.6e-91 340.1 252 71.0
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 1.1e-87 327.4 251 66.5
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 9.1e-87 324.3 297 60.3
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 2.0e-86 323.2 245 68.6
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 2.7e-86 322.8 251 65.3
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 3.5e-86 322.4 249 71.1
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 3.5e-86 322.4 244 70.1
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 3.8e-85 318.9 250 67.2
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 6.5e-85 318.2 235 67.2
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 1.9e-84 316.6 249 69.1
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 2.5e-84 316.2 206 76.7
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 4.2e-84 315.5 251 66.1
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 4.2e-84 315.5 251 64.1
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 2.7e-83 312.8 246 68.3
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 6.1e-83 311.6 256 66.0
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 1.4e-82 310.5 241 64.7
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 3.0e-82 309.3 247 66.4
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 6.8e-82 308.1 241 64.3
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 8.8e-82 307.8 244 65.6
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 1.2e-81 307.4 228 68.9
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 1.5e-81 307.0 244 66.0
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 7.5e-81 304.7 257 65.8
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 9.8e-81 304.3 199 76.9
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 1.3e-80 303.9 254 66.5
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 3.7e-80 302.4 245 65.7
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.8e-79 300.1 257 64.6
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 1.8e-79 300.1 257 64.6
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 2.4e-79 299.7 257 64.6
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 5.4e-79 298.5 213 70.9
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 3.5e-78 295.8 245 63.3
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 4.5e-78 295.4 243 62.1
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 4.5e-78 295.4 238 63.0
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 5.9e-78 295.0 249 64.3
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 7.7e-78 294.7 208 70.2
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 2.3e-77 293.1 223 69.5
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 3.8e-77 292.4 243 60.1
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 1.5e-76 290.4 211 69.2
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 2.5e-76 289.7 244 63.1
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 2.5e-76 289.7 210 68.6
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 4.2e-76 288.9 176 83.0
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 4.2e-76 288.9 234 63.2
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 4.2e-76 288.9 242 62.4
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 9.5e-76 287.7 213 67.6
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 9.5e-76 287.7 220 69.1
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 2.1e-75 286.6 201 73.1
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 2.8e-75 286.2 246 62.6
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 4.7e-75 285.4 230 63.0
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 4.7e-75 285.4 247 61.1
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 8.0e-75 284.6 191 73.3
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 1.8e-74 283.5 240 62.1
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 2.3e-74 283.1 247 58.7
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 2.3e-74 283.1 233 62.7
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 3.0e-74 282.7 207 69.6
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 8.9e-74 281.2 260 59.6
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 8.9e-74 281.2 218 65.6
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 1.5e-73 280.4 172 80.8
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 2.0e-73 280.0 246 61.0
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 2.6e-73 279.6 258 60.1
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 3.4e-73 279.3 214 66.4
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 3.4e-73 279.3 214 66.4
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 9.8e-73 277.7 205 67.3
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 1.7e-72 276.9 200 69.5
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 1.7e-72 276.9 200 69.5
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 1.7e-72 276.9 200 69.5
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 2.2e-72 276.6 205 66.3
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 2.2e-72 276.6 240 60.0
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 1.4e-71 273.9 202 68.8
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 5.4e-71 271.9 204 67.2
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 7.0e-71 271.6 172 77.3
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 1.6e-70 270.4 215 65.6
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 4.6e-70 268.9 205 65.9
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 7.8e-70 268.1 205 67.3
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 2.3e-69 266.5 225 65.3
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 2.9e-69 266.2 206 65.5
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 1.6e-67 260.4 170 77.6
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 6.2e-67 258.5 177 74.0
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 8.0e-67 258.1 216 63.4
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 1.8e-66 256.9 215 62.8
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 3.1e-66 256.1 232 59.5
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 5.2e-66 255.4 215 62.3
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 2.0e-65 253.4 165 74.5
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 2.6e-65 253.1 195 65.6
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 3.7e-64 249.2 167 69.5
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 7.0e-63 245.0 195 64.1
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 1.6e-62 243.8 213 61.5
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 3.5e-62 242.7 194 60.3
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 6.6e-61 238.4 236 58.1
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 2.8e-59 233.0 176 68.8
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 5.8e-57 225.3 252 52.4
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 4.4e-49 199.1 294 44.2
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 5.4e-47 192.2 197 53.3
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 1.2e-46 191.0 162 63.0
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 8.1e-43 178.3 202 49.5
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 4.0e-42 176.0 243 43.6
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 3.8e-40 169.5 135 61.5
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 1.8e-21 107.5 166 38.6
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 7.4e-20 102.1 70 68.6
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 3.1e-18 96.7 163 37.4
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.1e-15 88.2 55 74.5
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 3.7e-11 73.2 56 67.9
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 5.9e-09 65.9 52 61.5


User provided reference genes

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