Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 1.6e-223 779.2 426 100.0
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 2.5e-181 639.0 426 84.3
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 4.8e-180 634.8 424 82.1
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 7.6e-178 627.5 429 82.3
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 3.8e-177 625.2 427 82.4
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 5.3e-171 604.7 340 89.7
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 8.2e-164 580.9 399 82.5
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 4.5e-154 548.5 444 70.7
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 1.0e-153 547.4 380 74.2
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 5.0e-153 545.0 406 71.4
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 1.8e-150 536.6 375 72.8
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 1.1e-144 517.3 382 70.4
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 9.4e-144 514.2 386 69.7
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 8.8e-142 507.7 369 71.8
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 6.3e-140 501.5 383 68.9
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 1.1e-139 500.7 371 69.8
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 9.1e-139 497.7 379 69.9
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 9.1e-139 497.7 344 74.7
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 1.6e-138 496.9 373 70.2
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 1.6e-138 496.9 373 70.2
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 7.7e-138 494.6 381 67.7
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 1.7e-137 493.4 346 71.1
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 2.2e-137 493.0 374 69.0
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 2.2e-137 493.0 371 69.0
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 2.9e-137 492.7 375 68.5
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 5.0e-137 491.9 383 67.9
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 6.5e-137 491.5 375 68.8
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 8.5e-137 491.1 383 68.1
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 1.9e-136 490.0 348 71.3
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 2.5e-136 489.6 377 69.0
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 3.2e-136 489.2 440 61.1
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 5.5e-136 488.4 422 63.0
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 7.2e-136 488.0 378 68.0
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 1.2e-135 487.3 384 66.9
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 2.1e-135 486.5 373 68.1
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 3.6e-135 485.7 372 67.5
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 8.0e-135 484.6 380 67.6
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 1.0e-134 484.2 367 67.8
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 1.4e-134 483.8 365 67.7
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 1.8e-134 483.4 387 66.4
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 1.8e-134 483.4 387 66.1
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 2.3e-134 483.0 377 68.4
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 2.3e-134 483.0 372 67.2
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 3.0e-134 482.6 371 67.7
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 1.5e-133 480.3 377 66.6
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 2.0e-133 479.9 399 62.9
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 2.6e-133 479.6 358 71.2
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 4.4e-133 478.8 378 67.5
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 5.7e-133 478.4 371 67.4
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 7.5e-133 478.0 377 68.4
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 1.7e-132 476.9 373 66.5
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 1.7e-132 476.9 377 67.9
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 2.2e-132 476.5 374 66.6
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 2.8e-132 476.1 376 65.7
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 3.7e-132 475.7 384 65.9
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 4.8e-132 475.3 377 66.3
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 6.3e-132 474.9 380 65.3
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 1.1e-131 474.2 359 67.4
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 1.4e-131 473.8 369 68.3
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 2.4e-131 473.0 374 65.2
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 4.1e-131 472.2 375 68.0
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 9.1e-131 471.1 359 67.4
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 1.2e-130 470.7 374 65.2
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 1.6e-130 470.3 377 67.6
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 2.0e-130 469.9 373 66.5
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 2.7e-130 469.5 374 64.7
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 1.0e-129 467.6 347 68.9
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 1.3e-129 467.2 374 65.5
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 6.5e-129 464.9 361 66.5
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 2.5e-128 463.0 379 66.8
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 9.4e-128 461.1 380 64.7
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 4.7e-127 458.8 375 66.1
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 6.1e-127 458.4 346 67.9
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 8.0e-127 458.0 371 65.5
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 1.8e-126 456.8 329 70.2
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 1.8e-126 456.8 379 65.2
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 3.0e-126 456.1 373 64.1
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 5.2e-126 455.3 348 68.1
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 4.4e-125 452.2 313 74.1
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 2.4e-123 446.4 339 69.9
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 2.4e-123 446.4 347 66.9
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 7.0e-123 444.9 391 63.7
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 1.6e-122 443.7 345 65.8
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 1.0e-121 441.0 367 64.9
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 2.3e-121 439.9 383 63.2
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 3.8e-121 439.1 367 62.4
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 5.0e-121 438.7 372 62.9
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 5.0e-121 438.7 343 66.2
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 5.0e-121 438.7 370 62.7
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 5.0e-121 438.7 371 61.5
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 3.4e-117 426.0 239 88.3
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 7.0e-115 418.3 342 63.2
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 1.2e-111 407.5 299 70.9
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 2.0e-101 373.6 213 87.8
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 4.6e-98 362.5 377 55.7
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 2.3e-97 360.1 367 56.4
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 2.4e-91 340.1 266 67.3
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 2.4e-91 340.1 393 49.6
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 2.1e-90 337.0 346 56.9
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 1.1e-83 314.7 361 49.3
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 2.2e-76 290.4 207 71.5
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 1.2e-74 284.6 211 72.0
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 5.3e-70 269.2 346 46.5
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 1.8e-62 244.2 346 40.2
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 2.9e-60 236.9 345 43.5
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 1.3e-57 228.0 347 42.4
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 1.5e-53 214.5 225 53.3
Cc03_g11180 Coffea canephora HOM05D006898 ORTHO05D008506 9.0e-46 188.7 170 60.6
Zm00001eb231840 Zea mays HOM05D006898 ORTHO05D008506 2.4e-38 164.1 177 52.0
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 2.0e-32 144.4 268 35.4
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 1.1e-30 138.7 73 90.4
Hma1.2p1_2279F.1_g318700 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 1.7e-23 114.8 93 64.5
Cc00_g34780 Coffea canephora HOM05D006898 ORTHO05D008506 8.2e-23 112.5 102 59.8
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 1.5e-19 101.7 116 50.0
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 8.0e-18 95.9 137 48.9
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 8.8e-17 92.4 120 47.5
Actinidia29335 Actinidia chinensis HOM05D006898 ORTHO05D008506 1.3e-15 88.6 132 40.2
MCO07G214 Micromonas commoda HOM05D006898 ORTHO05D008506 4.8e-15 86.7 347 26.5
PRCOL_00003584 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 2.4e-14 84.3 359 27.3
HanXRQChr08g0214621 Helianthus annuus HOM05D006898 ORTHO05D008506 1.4e-06 58.5 35 74.3


User provided reference genes

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