Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G435500 Prunus persica HOM05D004883 ORTHO05D005766 3.7e-64 248.1 125 100.0
MD08G1101600 Malus domestica HOM05D004883 ORTHO05D005766 2.3e-58 228.8 125 92.0
MD15G1083000 Malus domestica HOM05D004883 ORTHO05D005766 5.2e-58 227.6 125 91.2
Atru.chr13.693 Acer truncatum HOM05D004883 ORTHO05D005766 1.1e-55 219.9 125 84.8
FAN20G2534 Fragaria x ananassa HOM05D004883 ORTHO05D005766 1.4e-55 219.5 125 84.8
Cpa.g.sc49.21 Carica papaya HOM05D004883 ORTHO05D005766 1.8e-55 219.2 122 86.9
QL02p004805 Quercus lobata HOM05D004883 ORTHO05D005766 1.8e-55 219.2 124 83.9
FvH4_2g34441 Fragaria vesca HOM05D004883 ORTHO05D005766 4.1e-55 218.0 125 84.0
FAN27G2225 Fragaria x ananassa HOM05D004883 ORTHO05D005766 5.3e-55 217.6 124 83.9
Haze_17525 Corylus avellana HOM05D004883 ORTHO05D005766 1.6e-54 216.1 123 85.4
RcHm_v2.0_Chr6g0307931 Rosa chinensis HOM05D004883 ORTHO05D005766 2.6e-54 215.3 125 83.2
Ah.09g236860 Amaranthus hybridus HOM05D004883 ORTHO05D005766 5.9e-54 214.2 126 82.5
TAR381G1103 Trochodendron aralioides HOM05D004883 ORTHO05D005766 1.0e-53 213.4 125 84.8
Hund21302 Selenicereus undatus HOM05D004883 ORTHO05D005766 1.3e-53 213.0 122 82.8
Rhsim07G0228400 Rhododendron simsii HOM05D004883 ORTHO05D005766 2.2e-53 212.2 125 82.4
vmacro04449 Vaccinium macrocarpon HOM05D004883 ORTHO05D005766 2.2e-53 212.2 125 83.2
GSVIVG01009495001 Vitis vinifera HOM05D004883 ORTHO05D005766 3.8e-53 211.5 125 83.2
arahy.Tifrunner.gnm1.ann1.09A9GY Arachis hypogaea HOM05D004883 ORTHO05D005766 6.5e-53 210.7 119 85.7
arahy.Tifrunner.gnm1.ann1.B0E7W8 Arachis hypogaea HOM05D004883 ORTHO05D005766 6.5e-53 210.7 119 85.7
AUR62012534 Chenopodium quinoa HOM05D004883 ORTHO05D005766 6.5e-53 210.7 123 81.3
Glyma.14G082800 Glycine max HOM05D004883 ORTHO05D005766 6.5e-53 210.7 123 80.5
AUR62014661 Chenopodium quinoa HOM05D004883 ORTHO05D005766 8.5e-53 210.3 123 81.3
AUR62044174 Chenopodium quinoa HOM05D004883 ORTHO05D005766 8.5e-53 210.3 123 81.3
PGR031G0707 Punica granatum HOM05D004883 ORTHO05D005766 8.5e-53 210.3 120 81.7
EL10Ac8g19960 Beta vulgaris HOM05D004883 ORTHO05D005766 1.1e-52 209.9 123 82.9
Dinv35960 Davidia involucrata HOM05D004883 ORTHO05D005766 1.1e-52 209.9 125 80.8
Hma1.2p1_0982F.1_g244010 Hydrangea macrophylla HOM05D004883 ORTHO05D005766 1.1e-52 209.9 125 80.8
TPR.G3781 Trifolium pratense HOM05D004883 ORTHO05D005766 1.1e-52 209.9 123 82.1
Ciclev10002854m.g Citrus clementina HOM05D004883 ORTHO05D005766 1.5e-52 209.5 125 80.0
Glyma.17G242300 Glycine max HOM05D004883 ORTHO05D005766 1.9e-52 209.1 123 80.5
Phvul.001G022000 Phaseolus vulgaris HOM05D004883 ORTHO05D005766 1.9e-52 209.1 125 78.4
Psat1g147680 Pisum sativum HOM05D004883 ORTHO05D005766 1.9e-52 209.1 125 78.4
Sc02g0007090 Simmondsia chinensis HOM05D004883 ORTHO05D005766 3.2e-52 208.4 125 79.2
CiPaw.16G043800 Carya illinoinensis HOM05D004883 ORTHO05D005766 5.5e-52 207.6 123 82.9
Ca_13291_v3 Cicer arietinum L. HOM05D004883 ORTHO05D005766 9.4e-52 206.8 125 78.4
Lj5g0012185 Lotus japonicus HOM05D004883 ORTHO05D005766 9.4e-52 206.8 122 80.3
COL.COLO4_26509 Corchorus olitorius HOM05D004883 ORTHO05D005766 1.2e-51 206.5 123 81.3
Gorai.009G211700 Gossypium raimondii HOM05D004883 ORTHO05D005766 1.2e-51 206.5 123 81.3
Actinidia38058 Actinidia chinensis HOM05D004883 ORTHO05D005766 1.6e-51 206.1 125 80.8
Gohir.D01G108200 Gossypium hirsutum HOM05D004883 ORTHO05D005766 1.6e-51 206.1 121 81.8
Gohir.D05G205400 Gossypium hirsutum HOM05D004883 ORTHO05D005766 1.6e-51 206.1 123 81.3
Lalb_Chr22g0355131 Lupinus albus HOM05D004883 ORTHO05D005766 2.1e-51 205.7 125 76.8
Medtr1g019430 Medicago truncatula HOM05D004883 ORTHO05D005766 2.7e-51 205.3 123 80.5
THA.LOC104822849 Tarenaya hassleriana HOM05D004883 ORTHO05D005766 2.7e-51 205.3 122 79.5
VMungo0647G0758 Vigna mungo HOM05D004883 ORTHO05D005766 2.7e-51 205.3 125 76.8
Thhalv10003291m.g Eutrema salsugineum HOM05D004883 ORTHO05D005766 4.7e-51 204.5 123 78.0
Oeu057282.1 Olea europaea HOM05D004883 ORTHO05D005766 4.7e-51 204.5 125 80.0
Gorai.002G132400 Gossypium raimondii HOM05D004883 ORTHO05D005766 6.1e-51 204.1 122 81.1
Thecc.08G007300 Theobroma cacao HOM05D004883 ORTHO05D005766 6.1e-51 204.1 123 79.7
AT5G42890 Arabidopsis thaliana HOM05D004883 ORTHO05D005766 1.4e-50 203.0 123 78.0
Migut.C00579 Erythranthe guttata HOM05D004883 ORTHO05D005766 1.4e-50 203.0 125 79.2
BcaC04g21964 Brassica carinata HOM05D004883 ORTHO05D005766 1.8e-50 202.6 123 77.2
A09p20040 Brassica napus HOM05D004883 ORTHO05D005766 1.8e-50 202.6 123 77.2
C09p25420 Brassica napus HOM05D004883 ORTHO05D005766 1.8e-50 202.6 123 77.2
BolC9t55441H Brassica oleracea HOM05D004883 ORTHO05D005766 1.8e-50 202.6 123 77.2
BraA09t37617Z Brassica rapa HOM05D004883 ORTHO05D005766 1.8e-50 202.6 123 77.2
CSS0025959 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 1.8e-50 202.6 125 78.4
CSS0031938 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 1.8e-50 202.6 125 78.4
ECA232G2590 Erigeron canadensis HOM05D004883 ORTHO05D005766 1.8e-50 202.6 125 79.2
Migut.N02708 Erythranthe guttata HOM05D004883 ORTHO05D005766 1.8e-50 202.6 125 79.2
BcaC06g31741 Brassica carinata HOM05D004883 ORTHO05D005766 4.0e-50 201.4 123 76.4
Gohir.A01G119900 Gossypium hirsutum HOM05D004883 ORTHO05D005766 4.0e-50 201.4 123 78.9
AL8G18060 Arabidopsis lyrata HOM05D004883 ORTHO05D005766 5.2e-50 201.1 123 77.2
MSTRG.1348 Avicennia marina HOM05D004883 ORTHO05D005766 5.2e-50 201.1 125 78.4
Carub.0008s0602 Capsella rubella HOM05D004883 ORTHO05D005766 5.2e-50 201.1 123 76.4
Eucgr.F02346 Eucalyptus grandis HOM05D004883 ORTHO05D005766 5.2e-50 201.1 154 67.5
Cc10_g04160 Coffea canephora HOM05D004883 ORTHO05D005766 6.7e-50 200.7 122 79.5
Sp2g07620 Schrenkiella parvula HOM05D004883 ORTHO05D005766 6.7e-50 200.7 123 76.4
Aa31LG9G12950 Aethionema arabicum HOM05D004883 ORTHO05D005766 8.8e-50 200.3 122 79.5
BcaB07g31037 Brassica carinata HOM05D004883 ORTHO05D005766 8.8e-50 200.3 123 75.6
ClCG05G019880 Citrullus lanatus HOM05D004883 ORTHO05D005766 8.8e-50 200.3 123 75.6
Lsat_1_v5_gn_4_125820 Lactuca sativa HOM05D004883 ORTHO05D005766 8.8e-50 200.3 123 78.9
Nn1g04858 Nelumbo nucifera HOM05D004883 ORTHO05D005766 8.8e-50 200.3 125 80.8
Oeu044836.1 Olea europaea HOM05D004883 ORTHO05D005766 8.8e-50 200.3 125 77.6
THA.LOC104814168 Tarenaya hassleriana HOM05D004883 ORTHO05D005766 8.8e-50 200.3 122 77.9
Sopen04g032520 Solanum pennellii HOM05D004883 ORTHO05D005766 1.5e-49 199.5 123 76.4
Duzib093G0126 Durio zibethinus HOM05D004883 ORTHO05D005766 2.0e-49 199.1 111 86.5
PGSC0003DMG400007973 Solanum tuberosum HOM05D004883 ORTHO05D005766 2.0e-49 199.1 123 76.4
FvH4_2g34440 Fragaria vesca HOM05D004883 ORTHO05D005766 2.6e-49 198.7 125 77.6
Sed0005554 Sechium edule HOM05D004883 ORTHO05D005766 2.6e-49 198.7 123 77.2
CARHR181250 Cardamine hirsuta HOM05D004883 ORTHO05D005766 3.3e-49 198.4 123 76.4
CsaV3_4G034310 Cucumis sativus L. HOM05D004883 ORTHO05D005766 3.3e-49 198.4 123 74.0
Solyc04g078920.3 Solanum lycopersicum HOM05D004883 ORTHO05D005766 4.4e-49 198.0 123 76.4
DCAR_020929 Daucus carota HOM05D004883 ORTHO05D005766 9.7e-49 196.8 123 75.6
Gohir.D06G016900 Gossypium hirsutum HOM05D004883 ORTHO05D005766 9.7e-49 196.8 120 79.2
Gorai.010G019800 Gossypium raimondii HOM05D004883 ORTHO05D005766 9.7e-49 196.8 120 79.2
HanXRQChr14g0439621 Helianthus annuus HOM05D004883 ORTHO05D005766 9.7e-49 196.8 123 77.2
SalBow7G2082 Salvia bowleyana HOM05D004883 ORTHO05D005766 1.7e-48 196.1 122 77.0
HanXRQChr05g0150871 Helianthus annuus HOM05D004883 ORTHO05D005766 2.8e-48 195.3 123 75.6
DCAR_012777 Daucus carota HOM05D004883 ORTHO05D005766 3.7e-48 194.9 119 79.0
SalBow3G1199 Salvia bowleyana HOM05D004883 ORTHO05D005766 3.7e-48 194.9 122 77.9
Gohir.A05G202300 Gossypium hirsutum HOM05D004883 ORTHO05D005766 8.2e-48 193.7 109 86.2
Peaxi162Scf00010g00308 Petunia axillaris HOM05D004883 ORTHO05D005766 8.2e-48 193.7 123 75.6
Lsat_1_v5_gn_6_112040 Lactuca sativa HOM05D004883 ORTHO05D005766 1.1e-47 193.4 122 75.4
ATR1102G009 Amborella trichopoda HOM05D004883 ORTHO05D005766 1.8e-47 192.6 125 78.4
CDE08G1634 Ceratophyllum demersum HOM05D004883 ORTHO05D005766 7.0e-47 190.7 120 79.2
MELO3C016751.2 Cucumis melo HOM05D004883 ORTHO05D005766 9.1e-47 190.3 129 69.8
Hund23571 Selenicereus undatus HOM05D004883 ORTHO05D005766 2.7e-46 188.7 126 73.0
TWI36G0538 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 4.5e-46 188.0 125 73.6
Aqoxy5G01236 Aquilegia oxysepala HOM05D004883 ORTHO05D005766 1.7e-45 186.0 125 76.0
ECA246G2602 Erigeron canadensis HOM05D004883 ORTHO05D005766 1.7e-45 186.0 125 72.8
PSO210G0389 Papaver somniferum HOM05D004883 ORTHO05D005766 2.9e-45 185.3 123 75.6
PSO170G5588 Papaver somniferum HOM05D004883 ORTHO05D005766 3.8e-45 184.9 123 75.6
Os06g0211300 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 1.1e-44 183.3 121 74.4
TWI56G0859 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 1.9e-44 182.6 125 71.2
Manes.05G174000 Manihot esculenta HOM05D004883 ORTHO05D005766 3.2e-44 181.8 119 72.3
Sabra02G0098900 Salix brachista HOM05D004883 ORTHO05D005766 4.2e-44 181.4 123 68.3
TWI56G0476 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 4.2e-44 181.4 125 71.2
MD00G1215600 Malus domestica HOM05D004883 ORTHO05D005766 7.2e-44 180.6 105 85.7
Potri.002G126200 Populus trichocarpa HOM05D004883 ORTHO05D005766 7.2e-44 180.6 123 68.3
Duzib041G0234 Durio zibethinus HOM05D004883 ORTHO05D005766 1.6e-43 179.5 123 73.2
SEGI_37934 Sequoiadendron giganteum HOM05D004883 ORTHO05D005766 5.2e-42 174.5 125 66.4
Pp3c24_4700 Physcomitrium patens HOM05D004883 ORTHO05D005766 2.0e-41 172.6 125 69.6
Potri.014G029300 Populus trichocarpa HOM05D004883 ORTHO05D005766 3.4e-41 171.8 120 68.3
CSS0006435 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 4.4e-41 171.4 124 69.4
Nitab4.5_0000287g0320 Nicotiana tabacum HOM05D004883 ORTHO05D005766 1.3e-40 169.9 123 70.7
Nitab4.5_0003118g0020 Nicotiana tabacum HOM05D004883 ORTHO05D005766 1.3e-40 169.9 123 70.7
Sabra14G0020100 Salix brachista HOM05D004883 ORTHO05D005766 1.3e-40 169.9 120 67.5
Mapoly0033s0053 Marchantia polymorpha HOM05D004883 ORTHO05D005766 2.8e-40 168.7 122 68.0
MBI06_g02552_MAGBIO Magnolia biondii HOM05D004883 ORTHO05D005766 4.8e-40 167.9 124 71.0
Os02g0765800 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 4.8e-40 167.9 121 65.3
C03p39670 Brassica napus HOM05D004883 ORTHO05D005766 7.7e-38 160.6 107 74.8
SMO169G0122 Selaginella moellendorffii HOM05D004883 ORTHO05D005766 1.3e-37 159.8 125 62.4
Manes.18G037300 Manihot esculenta HOM05D004883 ORTHO05D005766 2.3e-37 159.1 122 63.1
TAR625G0321 Trochodendron aralioides HOM05D004883 ORTHO05D005766 5.0e-37 157.9 97 79.4
BcaC09g50201 Brassica carinata HOM05D004883 ORTHO05D005766 4.2e-36 154.8 111 66.7
FAN15G1199 Fragaria x ananassa HOM05D004883 ORTHO05D005766 4.7e-35 151.4 83 85.5
CANSAT35G0766 Cannabis sativa HOM05D004883 ORTHO05D005766 6.1e-35 151.0 121 58.7
HPP92_013338 Vanilla planifolia HOM05D004883 ORTHO05D005766 8.0e-35 150.6 122 66.4
Peaxi162Scf00252g00711 Petunia axillaris HOM05D004883 ORTHO05D005766 1.5e-28 129.8 123 56.9
EL10Ac4g09184 Beta vulgaris HOM05D004883 ORTHO05D005766 5.6e-28 127.9 118 59.3
EL10Ac7g17187 Beta vulgaris HOM05D004883 ORTHO05D005766 1.0e-26 123.6 83 72.3
AagrBONN_evm.TU.Sc2ySwM_344.1976 Anthoceros agrestis HOM05D004883 ORTHO05D005766 5.2e-26 121.3 120 52.5
CAN.G1139.16 Capsicum annuum HOM05D004883 ORTHO05D005766 1.5e-25 119.8 90 63.3
BcaC01g04518 Brassica carinata HOM05D004883 ORTHO05D005766 9.8e-25 117.1 82 73.2
Nn5g30317 Nelumbo nucifera HOM05D004883 ORTHO05D005766 9.8e-25 117.1 125 56.0
Actinidia29871 Actinidia chinensis HOM05D004883 ORTHO05D005766 8.3e-24 114.0 62 87.1
BolC9t59992H Brassica oleracea HOM05D004883 ORTHO05D005766 1.4e-23 113.2 100 60.0
Gohir.A06G018633 Gossypium hirsutum HOM05D004883 ORTHO05D005766 1.4e-23 113.2 93 61.3
CAN.G371.3 Capsicum annuum HOM05D004883 ORTHO05D005766 2.4e-23 112.5 123 51.2
BolC1t02723H Brassica oleracea HOM05D004883 ORTHO05D005766 5.4e-23 111.3 68 75.0
Lj4A58G20 Lonicera japonica HOM05D000983 ORTHO05D005766 7.8e-22 107.5 60 81.7
Os01g0357200 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 5.0e-21 104.8 85 61.2
RcHm_v2.0_Chr5g0032801 Rosa chinensis HOM05D004883 ORTHO05D005766 1.8e-18 96.3 78 64.1
unitig_32.g11126 Utricularia gibba HOM05D004883 ORTHO05D005766 1.3e-16 90.1 63 66.7
C01p27920 Brassica napus HOM05D004883 ORTHO05D005766 1.3e-13 80.1 104 46.2
C09p72490 Brassica napus HOM05D004883 ORTHO05D005766 2.8e-11 72.4 47 70.2
MELO3C033382.2 Cucumis melo HOM05D004883 ORTHO05D005766 2.0e-09 66.2 39 71.8
PRCOL_00003255 Prasinoderma coloniale HOM05D004883 ORTHO05D005766 4.9e-08 61.6 107 32.7
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 1.1e-07 60.5 109 34.9
Cre14.g633550 Chlamydomonas reinhardtii HOM05D004883 ORTHO05D005766 4.1e-07 58.5 111 33.3


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