Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G399400 Prunus persica HOM05D005002 ORTHO05D006016 2.0e-69 265.8 144 100.0
MD08G1049200 Malus domestica HOM05D005002 ORTHO05D006016 5.5e-64 247.7 144 88.2
RcHm_v2.0_Chr6g0269591 Rosa chinensis HOM05D005002 ORTHO05D006016 5.2e-62 241.1 144 87.5
FvH4_2g11240 Fragaria vesca HOM05D005002 ORTHO05D006016 1.5e-61 239.6 145 86.2
QL01p029339 Quercus lobata HOM05D005002 ORTHO05D006016 1.5e-61 239.6 143 87.4
CSS0035568 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 4.4e-61 238.0 144 86.1
Dinv03972 Davidia involucrata HOM05D005002 ORTHO05D006016 5.7e-61 237.7 144 86.8
Actinidia03570 Actinidia chinensis HOM05D005002 ORTHO05D006016 1.3e-60 236.5 144 85.4
CSS0022428 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 2.2e-60 235.7 144 84.7
Ciclev10009813m.g Citrus clementina HOM05D005002 ORTHO05D006016 4.9e-60 234.6 152 83.6
Duzib168G1293 Durio zibethinus HOM05D005002 ORTHO05D006016 4.9e-60 234.6 144 84.0
PGR044G1228 Punica granatum HOM05D005002 ORTHO05D006016 6.3e-60 234.2 127 92.1
EL10Ac2g02432 Beta vulgaris HOM05D005002 ORTHO05D006016 8.3e-60 233.8 133 88.7
ClCG08G013890 Citrullus lanatus HOM05D005002 ORTHO05D006016 8.3e-60 233.8 144 84.0
Gohir.A07G034400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 8.3e-60 233.8 144 84.0
Gohir.D07G038000 Gossypium hirsutum HOM05D005002 ORTHO05D006016 8.3e-60 233.8 144 84.0
Gorai.001G039800 Gossypium raimondii HOM05D005002 ORTHO05D006016 8.3e-60 233.8 144 84.0
Oeu008768.2 Olea europaea HOM05D005002 ORTHO05D006016 8.3e-60 233.8 132 88.6
TAR622G0454 Trochodendron aralioides HOM05D005002 ORTHO05D006016 1.1e-59 233.4 144 82.6
GSVIVG01023464001 Vitis vinifera HOM05D005002 ORTHO05D006016 1.1e-59 233.4 133 87.2
Dinv03977 Davidia involucrata HOM05D005002 ORTHO05D006016 1.4e-59 233.0 144 84.0
GSVIVG01023467001 Vitis vinifera HOM05D005002 ORTHO05D006016 1.4e-59 233.0 133 88.0
CAN.G566.59 Capsicum annuum HOM05D005002 ORTHO05D006016 3.1e-59 231.9 133 88.0
Manes.03G005700 Manihot esculenta HOM05D005002 ORTHO05D006016 3.1e-59 231.9 144 81.9
Thecc.09G010700 Theobroma cacao HOM05D005002 ORTHO05D006016 3.1e-59 231.9 144 83.3
vmacro05092 Vaccinium macrocarpon HOM05D005002 ORTHO05D006016 3.1e-59 231.9 145 84.8
Nitab4.5_0001110g0170 Nicotiana tabacum HOM05D005002 ORTHO05D006016 4.1e-59 231.5 144 80.6
CANSAT25G2804 Cannabis sativa HOM05D005002 ORTHO05D006016 5.4e-59 231.1 133 88.0
Cc00_g22050 Coffea canephora HOM05D005002 ORTHO05D006016 9.2e-59 230.3 127 89.8
TWI34G0825 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 1.6e-58 229.6 144 84.7
CSS0010222 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 2.0e-58 229.2 144 84.0
FAN24G1669 Fragaria x ananassa HOM05D005002 ORTHO05D006016 2.0e-58 229.2 169 75.1
Gohir.A05G062833 Gossypium hirsutum HOM05D005002 ORTHO05D006016 2.0e-58 229.2 144 81.9
Gohir.A05G062900 Gossypium hirsutum HOM05D005002 ORTHO05D006016 2.0e-58 229.2 144 81.9
Gohir.D05G065400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 2.0e-58 229.2 144 81.9
Gorai.009G066200 Gossypium raimondii HOM05D005002 ORTHO05D006016 2.0e-58 229.2 144 81.9
Glyma.18G054400 Glycine max HOM05D005002 ORTHO05D006016 2.7e-58 228.8 133 87.2
Peaxi162Scf00459g00833 Petunia axillaris HOM05D005002 ORTHO05D006016 3.5e-58 228.4 133 86.5
Phvul.008G002400 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 5.9e-58 227.6 133 87.2
Solyc12g096470.2 Solanum lycopersicum HOM05D005002 ORTHO05D006016 1.0e-57 226.9 133 85.0
Sopen12g032300 Solanum pennellii HOM05D005002 ORTHO05D006016 1.0e-57 226.9 133 85.0
PGSC0003DMG400029278 Solanum tuberosum HOM05D005002 ORTHO05D006016 1.0e-57 226.9 133 85.0
Glyma.11G160400 Glycine max HOM05D005002 ORTHO05D006016 1.3e-57 226.5 133 85.7
Rhsim07G0172200 Rhododendron simsii HOM05D001416 ORTHO05D005885 1.3e-57 226.5 144 84.0
VMungo1383G2539 Vigna mungo HOM05D005002 ORTHO05D006016 2.3e-57 225.7 142 81.7
arahy.Tifrunner.gnm1.ann1.1V29TX Arachis hypogaea HOM05D005002 ORTHO05D006016 2.9e-57 225.3 143 79.7
Sed0003546 Sechium edule HOM05D005002 ORTHO05D006016 3.8e-57 224.9 144 81.9
VMungo1383G3578 Vigna mungo HOM05D005002 ORTHO05D006016 3.8e-57 224.9 133 85.7
Migut.A00405 Erythranthe guttata HOM05D005002 ORTHO05D006016 5.0e-57 224.6 127 86.6
Lj1g0025268 Lotus japonicus HOM05D005002 ORTHO05D006016 5.0e-57 224.6 133 85.7
QL02p017669 Quercus lobata HOM05D005002 ORTHO05D006016 6.6e-57 224.2 143 80.4
Eucgr.B03202 Eucalyptus grandis HOM05D005002 ORTHO05D006016 8.6e-57 223.8 133 85.0
Nn3g17630 Nelumbo nucifera HOM05D005002 ORTHO05D006016 8.6e-57 223.8 145 82.8
Potri.018G013300 Populus trichocarpa HOM05D005002 ORTHO05D006016 8.6e-57 223.8 123 91.9
Sed0020410 Sechium edule HOM05D005002 ORTHO05D006016 8.6e-57 223.8 144 81.2
MSTRG.25811 Avicennia marina HOM05D005002 ORTHO05D006016 1.1e-56 223.4 128 85.9
Lalb_Chr08g0234011 Lupinus albus HOM05D005002 ORTHO05D006016 1.1e-56 223.4 144 80.6
TWI63G0754 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 1.5e-56 223.0 170 72.9
Sabra18G0017200 Salix brachista HOM05D005002 ORTHO05D006016 1.9e-56 222.6 123 91.1
BcaNung05179 Brassica carinata HOM05D005002 ORTHO05D006016 5.6e-56 221.1 144 81.9
Medtr7g080740 Medicago truncatula HOM05D005002 ORTHO05D006016 5.6e-56 221.1 144 79.2
AL7G20310 Arabidopsis lyrata HOM05D005002 ORTHO05D006016 9.5e-56 220.3 144 81.9
Sp7g29520 Schrenkiella parvula HOM05D005002 ORTHO05D006016 9.5e-56 220.3 144 81.9
AT4G31720 Arabidopsis thaliana HOM05D005002 ORTHO05D006016 1.2e-55 219.9 144 81.2
arahy.Tifrunner.gnm1.ann1.JDP7FN Arachis hypogaea HOM05D005002 ORTHO05D006016 1.2e-55 219.9 150 76.7
MD15G1045700 Malus domestica HOM05D005002 ORTHO05D006016 1.2e-55 219.9 144 79.9
BraA08t33811Z Brassica rapa HOM05D005002 ORTHO05D006016 1.6e-55 219.5 144 81.9
BcaC09g51961 Brassica carinata HOM05D005002 ORTHO05D006016 2.8e-55 218.8 144 80.6
C01p07220 Brassica napus HOM05D005002 ORTHO05D006016 2.8e-55 218.8 144 80.6
BolC1t00713H Brassica oleracea HOM05D005002 ORTHO05D006016 2.8e-55 218.8 144 80.6
A01p06560 Brassica napus HOM05D005002 ORTHO05D006016 3.6e-55 218.4 144 80.6
BraA01t00615Z Brassica rapa HOM05D005002 ORTHO05D006016 3.6e-55 218.4 144 80.6
Carub.0007s0884 Capsella rubella HOM05D005002 ORTHO05D006016 3.6e-55 218.4 144 80.6
Psat0s2083g0280 Pisum sativum HOM05D005002 ORTHO05D006016 4.7e-55 218.0 132 80.3
Sc23g0006270 Simmondsia chinensis HOM05D005002 ORTHO05D006016 8.0e-55 217.2 127 84.3
TPR.G12644 Trifolium pratense HOM05D005002 ORTHO05D006016 1.0e-54 216.9 144 76.4
TPR.G15628 Trifolium pratense HOM05D005002 ORTHO05D006016 1.4e-54 216.5 144 75.0
Lalb_Chr10g0091021 Lupinus albus HOM05D005002 ORTHO05D006016 1.8e-54 216.1 144 77.1
A08p18490 Brassica napus HOM05D005002 ORTHO05D006016 3.0e-54 215.3 144 79.9
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 3.0e-54 215.3 133 79.7
THA.LOC104819944 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 4.0e-54 214.9 144 79.2
Thhalv10026546m.g Eutrema salsugineum HOM05D005002 ORTHO05D006016 5.2e-54 214.5 144 78.5
Lsat_1_v5_gn_6_32161 Lactuca sativa HOM05D005002 ORTHO05D006016 5.2e-54 214.5 144 76.4
Aa31LG2G18620 Aethionema arabicum HOM05D005002 ORTHO05D006016 6.8e-54 214.2 133 81.2
PSO478G2205 Papaver somniferum HOM05D005002 ORTHO05D006016 6.8e-54 214.2 143 79.7
PSO782G1729 Papaver somniferum HOM05D005002 ORTHO05D006016 6.8e-54 214.2 143 79.7
BcaB03g12714 Brassica carinata HOM05D005002 ORTHO05D006016 8.9e-54 213.8 144 80.6
HanXRQChr07g0195931 Helianthus annuus HOM05D005002 ORTHO05D006016 8.9e-54 213.8 144 77.1
HanXRQChr14g0453401 Helianthus annuus HOM05D005002 ORTHO05D006016 8.9e-54 213.8 144 75.7
ECA238G2697 Erigeron canadensis HOM05D005002 ORTHO05D006016 2.6e-53 212.2 144 74.3
RcHm_v2.0_Chr2g0161651 Rosa chinensis HOM05D005002 ORTHO05D006016 2.6e-53 212.2 136 80.9
THA.LOC104803866 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 4.4e-53 211.5 144 77.8
DCAR_020711 Daucus carota HOM05D004285 ORTHO05D006016 1.7e-52 209.5 125 83.2
Aqoxy7G00066 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 3.7e-52 208.4 123 83.7
DCAR_020712 Daucus carota HOM05D005002 ORTHO05D006016 6.4e-52 207.6 124 83.1
ATR0691G047 Amborella trichopoda HOM05D005002 ORTHO05D006016 2.0e-50 202.6 132 74.2
HPP92_000490 Vanilla planifolia HOM05D005002 ORTHO05D006016 4.6e-50 201.4 132 75.8
CDE04G1191 Ceratophyllum demersum HOM05D005002 ORTHO05D006016 6.0e-50 201.1 131 74.0
Cfa017847 Carpinus fangiana HOM05D005002 ORTHO05D006016 1.0e-49 200.3 144 76.4
BcaC01g01070 Brassica carinata HOM05D005002 ORTHO05D006016 3.9e-49 198.4 132 81.1
C03p87650 Brassica napus HOM05D005002 ORTHO05D006016 3.9e-49 198.4 132 81.1
Os09g0431500 Oryza sativa ssp. japonica HOM05D005002 ORTHO05D006016 1.5e-48 196.4 127 73.2
FAN15G1411 Fragaria x ananassa HOM05D000348 ORTHO05D000244 9.5e-48 193.7 106 93.4
Zm00001eb313590 Zea mays HOM05D005002 ORTHO05D006016 8.0e-47 190.7 124 73.4
CSS0031521 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 3.1e-46 188.7 117 85.5
MELO3C011321.2 Cucumis melo HOM05D005002 ORTHO05D006016 5.2e-46 188.0 122 82.0
AUR62037698 Chenopodium quinoa HOM05D005002 ORTHO05D006016 8.9e-46 187.2 114 86.0
AUR62020301 Chenopodium quinoa HOM05D005002 ORTHO05D006016 1.2e-45 186.8 117 85.5
Actinidia14152 Actinidia chinensis HOM05D005002 ORTHO05D006016 2.6e-45 185.7 117 83.8
Haze_18362 Corylus avellana HOM05D005002 ORTHO05D006016 2.6e-45 185.7 117 85.5
Hma1.2p1_0192F.1_g083460 Hydrangea macrophylla HOM05D005002 ORTHO05D006016 1.3e-44 183.3 106 89.6
Ah.09g224730 Amaranthus hybridus HOM05D005002 ORTHO05D006016 4.1e-43 178.3 139 69.8
SalBow4G2991 Salvia bowleyana HOM05D005002 ORTHO05D006016 2.7e-42 175.6 106 86.8
BcaC09g51955 Brassica carinata HOM05D005002 ORTHO05D006016 3.5e-42 175.3 134 72.4
Ca_06528_v3 Cicer arietinum L. HOM05D005002 ORTHO05D006016 2.5e-40 169.1 117 78.6
Mapoly0011s0105 Marchantia polymorpha HOM05D005002 ORTHO05D006016 2.1e-39 166.0 122 70.5
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 2.8e-39 165.6 106 76.4
BolC3t21083H Brassica oleracea HOM05D000888 ORTHO05D000740 3.6e-39 165.2 117 78.6
unitig_93.g30701 Utricularia gibba HOM05D005002 ORTHO05D006016 5.8e-37 157.9 133 63.2
Pp3c6_16040 Physcomitrium patens HOM05D005002 ORTHO05D006016 9.9e-37 157.1 115 66.1
BcaC09g51957 Brassica carinata HOM05D005002 ORTHO05D006016 5.4e-35 151.4 147 63.9
COL.COLO4_21113 Corchorus olitorius HOM05D005002 ORTHO05D006016 5.4e-35 151.4 106 71.7
Duzib168G1591 Durio zibethinus HOM05D005002 ORTHO05D006016 7.8e-34 147.5 84 89.3
COL.COLO4_19003 Corchorus olitorius HOM05D005002 ORTHO05D006016 2.3e-33 146.0 85 85.9
RcHm_v2.0_Chr2g0161711 Rosa chinensis HOM05D005002 ORTHO05D006016 2.3e-33 146.0 84 90.5
Lju41A41T35 Lonicera japonica HOM05D005002 ORTHO05D006016 7.3e-32 141.0 181 48.1
MSTRG.9875 Avicennia marina HOM05D005002 ORTHO05D006016 1.4e-30 136.7 84 82.1
Duzib187G1493 Durio zibethinus HOM05D005002 ORTHO05D006016 1.5e-29 133.3 86 80.2
MBI15_g18374_MAGBIO Magnolia biondii HOM05D005002 ORTHO05D006016 1.5e-29 133.3 129 60.5
CARHR239610 Cardamine hirsuta HOM05D005002 ORTHO05D006016 9.9e-29 130.6 84 82.1
CBR_g30254 Chara braunii HOM05D005002 ORTHO05D006016 4.1e-27 125.2 104 56.7
SMO141G0065 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 1.6e-26 123.2 120 58.3
Aqoxy7G00833 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 3.9e-25 118.6 81 76.5
Duzib150G1286 Durio zibethinus HOM05D005002 ORTHO05D006016 3.3e-24 115.5 105 61.9
SMO356G0735 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 7.3e-24 114.4 114 50.9
Nitab4.5_0000668g0030 Nicotiana tabacum HOM05D005002 ORTHO05D006016 1.2e-23 113.6 64 85.9
SGA_v2.0_scaffold193G40677 Striga asiatica HOM05D005002 ORTHO05D006016 8.1e-23 110.9 93 63.4
Lalb_Chr08g0233981 Lupinus albus HOM05D005002 ORTHO05D006016 6.9e-22 107.8 65 78.5
FAN27G2219 Fragaria x ananassa HOM05D005002 ORTHO05D006016 3.5e-18 95.5 61 78.7
Lalb_Chr08g0233961 Lupinus albus HOM05D005002 ORTHO05D006016 4.6e-18 95.1 60 81.7
PRCOL_00006189 Prasinoderma coloniale HOM05D005002 ORTHO05D006016 6.0e-18 94.7 123 40.7
QL12p013723 Quercus lobata HOM05D005002 ORTHO05D006016 6.0e-18 94.7 60 83.3
FAN20G1660 Fragaria x ananassa HOM05D005002 ORTHO05D006016 7.8e-18 94.4 61 77.0
SEGI_02469 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 7.8e-18 94.4 62 77.4
CiPaw.15G092700 Carya illinoinensis HOM05D005002 ORTHO05D006016 8.7e-17 90.9 60 76.7
MCO01G145 Micromonas commoda HOM05D005002 ORTHO05D006016 9.6e-16 87.4 107 44.9
COL.COLO4_27723 Corchorus olitorius HOM05D005002 ORTHO05D006016 4.8e-15 85.1 59 72.9
EL10Ac5g10893 Beta vulgaris HOM05D005002 ORTHO05D006016 1.5e-13 80.1 43 86.0
Phvul.009G222000 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 4.5e-13 78.6 73 60.3
Actinidia25736 Actinidia chinensis HOM05D005002 ORTHO05D006016 6.0e-10 68.2 153 35.9
Cre16.g657000 Chlamydomonas reinhardtii HOM05D005002 ORTHO05D006016 2.5e-08 62.8 126 33.3
HanXRQChr14g0435251 Helianthus annuus HOM05D005002 ORTHO05D006016 7.4e-08 61.2 57 59.6
SEGI_34318 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 1.1e-06 57.4 41 68.3


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