Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G325800 Prunus persica HOM05D021888 ORTHO05D003990 1.2e-182 643.7 395 100.0
MD13G1024700 Malus domestica HOM05D000651 ORTHO05D003990 1.1e-53 215.3 513 35.5
FvH4_4g32502 Fragaria vesca HOM05D000651 ORTHO05D003990 5.5e-26 123.2 321 37.1
FAN22G1281 Fragaria x ananassa HOM05D000137 ORTHO05D000503 5.5e-26 123.2 334 37.1
FAN12G2732 Fragaria x ananassa HOM05D000651 ORTHO05D003990 3.6e-25 120.6 321 36.8
RcHm_v2.0_Chr4g0441381 Rosa chinensis HOM05D000651 ORTHO05D003990 1.5e-15 88.6 201 40.8
ClCG01G006200 Citrullus lanatus HOM05D021888 ORTHO05D003990 1.2e-12 79.0 96 52.1
MELO3C005307.2 Cucumis melo HOM05D021888 ORTHO05D003990 4.5e-12 77.0 139 41.7
Peaxi162Scf00047g00334 Petunia axillaris HOM05D000651 ORTHO05D003990 2.2e-11 74.7 63 57.1
Peaxi162Scf00253g01127 Petunia axillaris HOM05D000651 ORTHO05D003990 2.2e-11 74.7 63 57.1
CSS0042277 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D003990 1.1e-10 72.4 302 25.5
Sed0005667 Sechium edule HOM05D021888 ORTHO05D003990 1.1e-10 72.4 242 31.8
Nitab4.5_0000926g0060 Nicotiana tabacum HOM05D000651 ORTHO05D003990 1.5e-10 72.0 57 57.9
TWI31G1292 Tripterygium wilfordii HOM05D000651 ORTHO05D003990 1.5e-10 72.0 116 44.0
Dinv07655 Davidia involucrata HOM05D000651 ORTHO05D003990 1.9e-10 71.6 133 38.3
Cc11_g08580 Coffea canephora HOM05D000651 ORTHO05D003990 3.2e-10 70.9 99 43.4
Cfa020037 Carpinus fangiana HOM05D015316 ORTHO05D003990 5.5e-10 70.1 291 29.6
Nitab4.5_0000426g0240 Nicotiana tabacum HOM05D000651 ORTHO05D003990 5.5e-10 70.1 57 57.9
Nitab4.5_0007504g0010 Nicotiana tabacum HOM05D000651 ORTHO05D003990 5.5e-10 70.1 57 56.1
Duzib248G1110 Durio zibethinus HOM05D000651 ORTHO05D003990 7.2e-10 69.7 136 36.0
Nitab4.5_0004230g0020 Nicotiana tabacum HOM05D000651 ORTHO05D003990 9.4e-10 69.3 69 50.7
Dinv14425 Davidia involucrata HOM05D008822 ORTHO05D003990 1.2e-09 68.9 53 62.3
Lj4g0023305 Lotus japonicus HOM05D000651 ORTHO05D003990 1.2e-09 68.9 118 43.2
Nitab4.5_0007359g0040 Nicotiana tabacum HOM05D000651 ORTHO05D003990 1.2e-09 68.9 62 59.7
PGSC0003DMG402006007 Solanum tuberosum HOM05D000651 ORTHO05D003990 1.2e-09 68.9 62 50.0
ECA246G2591 Erigeron canadensis HOM05D000651 ORTHO05D003990 1.6e-09 68.6 68 48.5
COL.COLO4_20494 Corchorus olitorius HOM05D000651 ORTHO05D003990 2.1e-09 68.2 259 30.1
Haze_20167 Corylus avellana HOM05D015316 ORTHO05D003990 2.1e-09 68.2 268 32.1
Glyma.09G108100 Glycine max HOM05D000651 ORTHO05D003990 2.1e-09 68.2 62 61.3
Cc11_g08570 Coffea canephora HOM05D000651 ORTHO05D003990 2.7e-09 67.8 69 49.3
Migut.E00431 Erythranthe guttata HOM05D000651 ORTHO05D003990 2.7e-09 67.8 66 50.0
Sc04g0005050 Simmondsia chinensis HOM05D000651 ORTHO05D003990 3.6e-09 67.4 62 51.6
PGSC0003DMG401006007 Solanum tuberosum HOM05D000651 ORTHO05D003990 3.6e-09 67.4 62 50.0
EL10Ac1g00119 Beta vulgaris HOM05D000294 ORTHO05D003990 4.7e-09 67.0 105 41.0
CiPaw.03G044500 Carya illinoinensis HOM05D015316 ORTHO05D003990 4.7e-09 67.0 227 33.0
Manes.17G077833 Manihot esculenta HOM05D000651 ORTHO05D003990 6.1e-09 66.6 323 27.9
Eucgr.J02424 Eucalyptus grandis HOM05D008822 ORTHO05D003990 8.0e-09 66.2 57 56.1
Eucgr.J02425 Eucalyptus grandis HOM05D000651 ORTHO05D003990 8.0e-09 66.2 102 44.1
unitig_0.g2324 Utricularia gibba HOM05D000651 ORTHO05D003990 8.0e-09 66.2 62 56.5
Duzib251G0891 Durio zibethinus HOM05D000651 ORTHO05D003990 1.0e-08 65.9 221 29.4
Migut.L00358 Erythranthe guttata HOM05D000651 ORTHO05D003990 1.0e-08 65.9 63 52.4
FAN17G1493 Fragaria x ananassa HOM05D000137 ORTHO05D000503 1.0e-08 65.9 322 29.5
BcaB08g37226 Brassica carinata HOM05D008822 ORTHO05D003990 1.4e-08 65.5 53 64.2
Sopen11g008640 Solanum pennellii HOM05D000651 ORTHO05D003990 1.4e-08 65.5 65 47.7
Prupe.5G053600 Prunus persica HOM05D015272 ORTHO05D003990 1.8e-08 65.1 217 33.2
TPR.G31286 Trifolium pratense HOM05D000651 ORTHO05D003990 1.8e-08 65.1 90 42.2
Ca_08976_v3 Cicer arietinum L. HOM05D000651 ORTHO05D003990 2.3e-08 64.7 63 55.6
Manes.17G077700 Manihot esculenta HOM05D000651 ORTHO05D003990 2.3e-08 64.7 344 27.6
CSS0033557 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D003990 3.0e-08 64.3 302 25.8
Gohir.A04G141600 Gossypium hirsutum HOM05D000651 ORTHO05D003990 3.0e-08 64.3 141 34.0
EL10As3g23335 Beta vulgaris HOM05D000294 ORTHO05D000177 4.0e-08 63.9 89 42.7
CsaV3_5G028450 Cucumis sativus L. HOM05D021888 ORTHO05D003990 4.0e-08 63.9 316 27.2
Sopen11g008610 Solanum pennellii HOM05D000651 ORTHO05D003990 4.0e-08 63.9 65 47.7
Sopen11g008650 Solanum pennellii HOM05D000651 ORTHO05D003990 6.7e-08 63.2 65 47.7
Medtr7g106530 Medicago truncatula HOM05D000651 ORTHO05D003990 8.8e-08 62.8 64 51.6
Solyc11g013580.1 Solanum lycopersicum HOM05D000651 ORTHO05D003990 8.8e-08 62.8 65 47.7
Gohir.D04G187300 Gossypium hirsutum HOM05D000651 ORTHO05D003990 1.1e-07 62.4 136 34.6
RcHm_v2.0_Chr7g0206321 Rosa chinensis HOM05D015272 ORTHO05D022694 1.1e-07 62.4 68 47.1
Sopen10g027700 Solanum pennellii HOM05D000651 ORTHO05D003990 1.1e-07 62.4 62 46.8
Thecc.02G282500 Theobroma cacao HOM05D000651 ORTHO05D003990 1.1e-07 62.4 355 24.2
vmacro00413 Vaccinium macrocarpon HOM05D008822 ORTHO05D003990 1.1e-07 62.4 329 26.7
CSS0022216 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D003990 1.5e-07 62.0 142 37.3
AUR62032767 Chenopodium quinoa HOM05D008822 ORTHO05D003990 1.5e-07 62.0 60 48.3
DCAR_007300 Daucus carota HOM05D002189 ORTHO05D002233 1.5e-07 62.0 53 60.4
MD06G1045800 Malus domestica HOM05D015272 ORTHO05D003990 1.5e-07 62.0 239 28.5
Oeu003381.1 Olea europaea HOM05D000651 ORTHO05D003990 1.5e-07 62.0 137 35.8
CSS0040679 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D003990 2.0e-07 61.6 140 36.4
CiPaw.04G078100 Carya illinoinensis HOM05D015316 ORTHO05D003990 2.0e-07 61.6 173 32.9
Sopen10g027670 Solanum pennellii HOM05D000651 ORTHO05D003990 2.0e-07 61.6 62 48.4
Ciclev10015830m.g Citrus clementina HOM05D000651 ORTHO05D003990 2.6e-07 61.2 66 45.5
DCAR_030223 Daucus carota HOM05D017778 ORTHO05D003990 2.6e-07 61.2 62 50.0
Sopen10g027660 Solanum pennellii HOM05D000002 ORTHO05D003990 2.6e-07 61.2 62 46.8
Atru.chr12.1001 Acer truncatum HOM05D008822 ORTHO05D003990 3.3e-07 60.8 262 28.6
Actinidia04066 Actinidia chinensis HOM05D000896 ORTHO05D000594 3.3e-07 60.8 193 29.5
Medtr1g048840 Medicago truncatula HOM05D000651 ORTHO05D003990 3.3e-07 60.8 102 40.2
Oeu045858.1 Olea europaea HOM05D008822 ORTHO05D003990 3.3e-07 60.8 160 33.1
Solyc11g013590.1 Solanum lycopersicum HOM05D000651 ORTHO05D003990 3.3e-07 60.8 65 44.6
arahy.Tifrunner.gnm1.ann1.ZQQT14 Arachis hypogaea HOM05D000651 ORTHO05D003990 4.4e-07 60.5 71 50.7
CSS0042175 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D003990 4.4e-07 60.5 140 35.7
Ca_26223_v3 Cicer arietinum L. HOM05D000651 ORTHO05D003990 5.7e-07 60.1 63 52.4
Solyc11g013630.1 Solanum lycopersicum HOM05D000651 ORTHO05D003990 7.4e-07 59.7 65 46.2
CSS0020544 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D003990 9.7e-07 59.3 142 36.6
CAN.G698.4 Capsicum annuum HOM05D000651 ORTHO05D003990 9.7e-07 59.3 97 35.1
AT5G08780 Arabidopsis thaliana HOM05D008822 ORTHO05D003990 1.3e-06 58.9 53 56.6
A10p28000 Brassica napus HOM05D008822 ORTHO05D003990 1.3e-06 58.9 53 58.5
BraA10t44850Z Brassica rapa HOM05D008822 ORTHO05D003990 1.3e-06 58.9 53 58.5
Psat7g128680 Pisum sativum HOM05D000651 ORTHO05D003990 1.7e-06 58.5 135 34.1
arahy.Tifrunner.gnm1.ann1.34Z3BG Arachis hypogaea HOM05D000651 ORTHO05D003990 2.2e-06 58.2 118 39.0
Cpa.g.sc37.24 Carica papaya HOM05D008822 ORTHO05D003990 2.2e-06 58.2 224 28.1
Cpa.g.sc37.25 Carica papaya HOM05D008822 ORTHO05D003990 2.2e-06 58.2 224 28.1
AUR62042685 Chenopodium quinoa HOM05D008822 ORTHO05D003990 2.2e-06 58.2 60 45.0
Thhalv10015336m.g Eutrema salsugineum HOM05D008822 ORTHO05D003990 2.2e-06 58.2 53 56.6
TPR.G29102 Trifolium pratense HOM05D000651 ORTHO05D003990 2.2e-06 58.2 59 54.2
TPR.G32483 Trifolium pratense HOM05D000651 ORTHO05D003990 2.2e-06 58.2 59 54.2
Ah.04g154370 Amaranthus hybridus HOM05D000294 ORTHO05D003990 2.8e-06 57.8 49 59.2
SGA_v2.0_scaffold39G15180 Striga asiatica HOM05D000651 ORTHO05D003990 3.7e-06 57.4 166 28.9
arahy.Tifrunner.gnm1.ann1.1CZ7RW Arachis hypogaea HOM05D000651 ORTHO05D003990 4.8e-06 57.0 71 46.5
Lalb_Chr05g0219531 Lupinus albus HOM05D000651 ORTHO05D003990 4.8e-06 57.0 148 31.8
Phvul.002G094900 Phaseolus vulgaris HOM05D000651 ORTHO05D003990 4.8e-06 57.0 66 48.5
PGR042G3954 Punica granatum HOM05D000651 ORTHO05D003990 4.8e-06 57.0 248 27.0
TAR629G0208 Trochodendron aralioides HOM05D008822 ORTHO05D003990 4.8e-06 57.0 62 50.0
Solyc04g007720.3 Solanum lycopersicum HOM05D000651 ORTHO05D003990 6.3e-06 56.6 58 46.6
TPR.G38350 Trifolium pratense HOM05D000651 ORTHO05D003990 6.3e-06 56.6 108 36.1
AUR62038081 Chenopodium quinoa HOM05D000294 ORTHO05D003990 8.2e-06 56.2 53 49.1
AUR62038169 Chenopodium quinoa HOM05D008822 ORTHO05D003990 8.2e-06 56.2 53 49.1
Ca_18736_v3 Cicer arietinum L. HOM05D000651 ORTHO05D003990 8.2e-06 56.2 123 34.1
Sopen04g002810 Solanum pennellii HOM05D000651 ORTHO05D003990 8.2e-06 56.2 58 46.6


User provided reference genes

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