Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G296500 Prunus persica HOM05D003266 ORTHO05D037429 1.4e-19 98.6 48 100.0
Prupe.6G337500 Prunus persica HOM05D003266 ORTHO05D037429 8.7e-14 79.3 37 100.0
Prupe.7G044400 Prunus persica HOM05D003266 ORTHO05D037429 1.0e-06 55.8 30 83.3
arahy.Tifrunner.gnm1.ann1.MP8KIY Arachis hypogaea HOM05D003266 ORTHO05D003718 1.8e-06 55.1 45 62.2
Atru.chr1.3468 Acer truncatum HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Actinidia32711 Actinidia chinensis HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Ah.01g021810 Amaranthus hybridus HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
ATR0705G157 Amborella trichopoda HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
AL3G29000 Arabidopsis lyrata HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
AT3G16260 Arabidopsis thaliana HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
MSTRG.22654 Avicennia marina HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
EL10Ac9g22044 Beta vulgaris HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
BcaB06g25715 Brassica carinata HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
BcaC05g28901 Brassica carinata HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
A05p33260 Brassica napus HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
C05p50250 Brassica napus HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
BolC5t33776H Brassica oleracea HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
BraA05t22151Z Brassica rapa HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
CSS0038057 Camellia sinensis var. sinensis HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Carub.0003s1601 Capsella rubella HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
CARHR091470 Cardamine hirsuta HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Cpa.g.sc34.31 Carica papaya HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
CiPaw.01G233800 Carya illinoinensis HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
AUR62031873 Chenopodium quinoa HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
ClCG09G001800 Citrullus lanatus HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
MELO3C024265.2 Cucumis melo HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
CsaV3_7G033540 Cucumis sativus L. HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Dinv38001 Davidia involucrata HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
ECA232G0114 Erigeron canadensis HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Migut.I00926 Erythranthe guttata HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Thhalv10019999m.g Eutrema salsugineum HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Gohir.A10G067100 Gossypium hirsutum HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Gohir.D10G068200 Gossypium hirsutum HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Gorai.011G072800 Gossypium raimondii HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
HanXRQChr09g0275951 Helianthus annuus HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Hma1.2p1_1689F.1_g297710 Hydrangea macrophylla HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Lsat_1_v5_gn_4_100861 Lactuca sativa HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Lj5C56T10 Lonicera japonica HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Lalb_Chr24g0396021 Lupinus albus HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
MBI04_g27074_MAGBIO Magnolia biondii HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Manes.11G036300 Manihot esculenta HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Nn2g12597 Nelumbo nucifera HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Oeu040356.1 Olea europaea HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Peaxi162Scf00015g00241 Petunia axillaris HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Potri.001G186900 Populus trichocarpa HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Prupe.3G063700 Prunus persica HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Rhsim08G0225600 Rhododendron simsii HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Sabra01G0153400 Salix brachista HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Sp3g14630 Schrenkiella parvula HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Sed0017993 Sechium edule HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Sed0020980 Sechium edule HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Hund00661 Selenicereus undatus HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
THA.LOC104817970 Tarenaya hassleriana HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
Thecc.06G095700 Theobroma cacao HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
unitig_748.g8094 Utricularia gibba HOM05D003266 ORTHO05D003718 3.9e-06 53.9 25 96.0
CSS0002644 Camellia sinensis var. sinensis HOM05D003266 ORTHO05D003718 5.1e-06 53.5 25 92.0
Duzib160G0509 Durio zibethinus HOM05D003266 ORTHO05D003718 5.1e-06 53.5 25 92.0
Lj9C510G10 Lonicera japonica HOM05D003266 ORTHO05D003718 5.1e-06 53.5 25 92.0
Os01g0232300 Oryza sativa ssp. japonica HOM05D003266 ORTHO05D003718 5.1e-06 53.5 25 92.0
Hund06647 Selenicereus undatus HOM05D003266 ORTHO05D003718 5.1e-06 53.5 25 96.0
Zm00001eb339290 Zea mays HOM05D003266 ORTHO05D003718 5.1e-06 53.5 25 92.0
Actinidia21698 Actinidia chinensis HOM05D003266 ORTHO05D003718 6.7e-06 53.1 25 96.0
Nitab4.5_0013558g0010 Nicotiana tabacum HOM05D003266 ORTHO05D003718 6.7e-06 53.1 29 82.8
QL05p021182 Quercus lobata HOM05D003266 ORTHO05D003718 6.7e-06 53.1 25 92.0
vmacro18872 Vaccinium macrocarpon HOM05D003266 ORTHO05D003718 6.7e-06 53.1 31 77.4
CANSAT80G0796 Cannabis sativa HOM05D003266 ORTHO05D003718 8.7e-06 52.8 25 92.0
Cfa002112 Carpinus fangiana HOM05D003266 ORTHO05D003718 8.7e-06 52.8 25 92.0
CDE05G0037 Ceratophyllum demersum HOM05D003266 ORTHO05D003718 8.7e-06 52.8 25 92.0
CDE05G0524 Ceratophyllum demersum HOM05D003266 ORTHO05D003718 8.7e-06 52.8 25 92.0
COL.COLO4_08423 Corchorus olitorius HOM05D003266 ORTHO05D003718 8.7e-06 52.8 25 92.0
Haze_16335 Corylus avellana HOM05D003266 ORTHO05D003718 8.7e-06 52.8 25 92.0
Lj3g0015133 Lotus japonicus HOM05D003266 ORTHO05D003718 8.7e-06 52.8 25 92.0
Lalb_Chr22g0351451 Lupinus albus HOM05D003266 ORTHO05D003718 8.7e-06 52.8 25 92.0
Nitab4.5_0002424g0070 Nicotiana tabacum HOM05D003266 ORTHO05D003718 8.7e-06 52.8 25 92.0
SalBow2G0145 Salvia bowleyana HOM05D003266 ORTHO05D003718 8.7e-06 52.8 25 92.0
Sc12g0009560 Simmondsia chinensis HOM05D003266 ORTHO05D003718 8.7e-06 52.8 25 92.0
Sc12g0009670 Simmondsia chinensis HOM05D003266 ORTHO05D003718 8.7e-06 52.8 25 92.0
Solyc03g120470.4 Solanum lycopersicum HOM05D003266 ORTHO05D003718 8.7e-06 52.8 25 92.0
Sopen00g008370 Solanum pennellii HOM05D003266 ORTHO05D003718 8.7e-06 52.8 25 92.0
PGSC0003DMG401002553 Solanum tuberosum HOM05D003266 ORTHO05D003718 8.7e-06 52.8 25 92.0
TWI12G1119 Tripterygium wilfordii HOM05D003266 ORTHO05D003718 8.7e-06 52.8 25 92.0


User provided reference genes

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