Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 2.9e-171 605.1 303 100.0
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 6.2e-158 560.8 303 92.1
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 3.8e-155 551.6 303 91.1
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 7.1e-154 547.4 303 90.4
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.1e-153 545.8 303 90.1
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 3.5e-153 545.0 303 90.1
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.0e-152 543.5 303 89.4
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 3.0e-152 542.0 303 89.1
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 2.2e-147 525.8 299 86.0
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 8.4e-147 523.9 299 86.3
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 1.1e-146 523.5 304 85.9
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 1.4e-146 523.1 301 85.7
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 1.4e-146 523.1 301 85.7
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 5.5e-146 521.2 302 84.1
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 6.0e-145 517.7 301 84.4
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 6.0e-145 517.7 301 84.4
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 7.9e-145 517.3 303 83.8
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 3.9e-144 515.0 301 84.1
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 5.1e-144 514.6 303 83.5
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 8.7e-144 513.8 302 83.4
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 9.6e-143 510.4 303 81.8
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 9.6e-143 510.4 303 81.8
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 1.3e-142 510.0 303 82.8
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 1.3e-142 510.0 303 82.8
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 2.8e-142 508.8 303 81.2
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 1.1e-141 506.9 303 82.2
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 2.4e-141 505.8 303 81.5
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 5.3e-141 504.6 303 80.5
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 2.0e-140 502.7 303 81.8
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 1.0e-139 500.4 303 79.5
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 3.8e-139 498.4 303 81.5
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 3.2e-138 495.4 303 80.5
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 4.2e-138 495.0 303 81.2
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 4.2e-138 495.0 301 81.4
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 7.2e-138 494.2 303 80.9
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 7.2e-138 494.2 303 80.9
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 2.7e-137 492.3 303 78.2
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 2.3e-136 489.2 303 78.2
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 3.9e-136 488.4 303 79.9
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 6.7e-136 487.6 303 77.9
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 8.7e-136 487.3 299 79.9
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 3.3e-135 485.3 299 79.6
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 3.3e-135 485.3 303 79.2
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 1.6e-134 483.0 303 77.2
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 8.2e-134 480.7 299 78.6
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 2.4e-133 479.2 301 79.1
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 4.1e-133 478.4 299 78.6
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 6.9e-133 477.6 299 78.3
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 6.9e-133 477.6 301 78.1
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 9.1e-133 477.2 299 78.3
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 1.5e-132 476.5 299 78.3
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 2.6e-132 475.7 301 77.7
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 1.0e-131 473.8 301 78.7
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 1.0e-131 473.8 301 77.1
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 8.5e-131 470.7 299 75.3
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 1.2e-129 466.8 300 77.0
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 2.1e-129 466.1 299 75.9
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 4.6e-129 464.9 299 74.6
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 4.6e-129 464.9 291 77.0
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 3.0e-128 462.2 293 77.8
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 1.5e-127 459.9 298 75.2
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 2.6e-127 459.1 305 76.7
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 3.1e-125 452.2 305 73.1
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 6.9e-125 451.1 299 74.2
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 2.6e-124 449.1 306 73.5
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 1.0e-123 447.2 306 73.5
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 6.5e-123 444.5 298 71.5
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 3.2e-122 442.2 298 72.1
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 4.2e-122 441.8 298 71.1
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 5.5e-122 441.4 311 72.0
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 7.2e-122 441.0 298 71.8
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 1.2e-121 440.3 298 72.1
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 1.6e-121 439.9 298 71.8
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 2.1e-121 439.5 298 71.1
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 2.1e-121 439.5 305 73.1
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 3.6e-121 438.7 298 70.8
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 3.6e-121 438.7 275 79.6
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 1.8e-120 436.4 298 71.1
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 2.3e-120 436.0 299 69.9
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 3.0e-120 435.6 298 71.5
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 3.9e-120 435.3 287 74.6
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 5.2e-120 434.9 298 71.1
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 6.7e-120 434.5 298 71.5
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 6.7e-120 434.5 298 71.5
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 8.8e-120 434.1 302 70.9
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.5e-119 433.3 298 72.1
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 3.3e-119 432.2 299 70.2
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 5.7e-119 431.4 298 70.5
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 9.7e-119 430.6 298 69.8
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 9.7e-119 430.6 298 69.8
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 9.7e-119 430.6 298 69.8
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 4.8e-118 428.3 298 70.5
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 6.3e-118 427.9 298 70.8
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 1.5e-114 416.8 302 68.9
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 2.3e-112 409.5 299 69.2
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 5.2e-112 408.3 246 79.3
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 1.2e-111 407.1 247 79.8
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 1.9e-106 389.8 300 66.0
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 6.1e-105 384.8 234 79.9
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 1.4e-104 383.6 227 81.1
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 2.0e-103 379.8 299 63.9
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 2.8e-102 375.9 215 84.2
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 8.3e-102 374.4 261 71.6
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 7.0e-101 371.3 228 78.9
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 2.9e-99 365.9 305 61.0
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.2e-97 360.5 217 78.8
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 2.1e-97 359.8 249 69.1
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.8e-96 356.7 221 76.9
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 1.7e-94 350.1 219 79.0
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 2.8e-94 349.4 255 67.1
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 4.3e-90 335.5 277 61.4
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 2.8e-81 306.2 340 50.6
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 1.4e-80 303.9 303 56.1
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 1.4e-77 293.9 173 77.5
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 2.1e-60 236.9 319 44.5
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 6.2e-49 198.7 143 72.0
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 1.1e-48 198.0 163 61.3
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 3.0e-43 179.9 303 40.3
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 1.5e-42 177.6 343 36.2
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 2.6e-39 166.8 177 49.7
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 8.4e-38 161.8 105 77.1
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 5.1e-35 152.5 91 73.6
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 2.7e-28 130.2 87 71.3
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 7.9e-28 128.6 89 74.2
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 5.7e-26 122.5 86 74.4
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 4.1e-24 116.3 72 72.2
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 5.9e-23 112.5 317 31.2
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 2.7e-20 103.6 135 46.7
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 2.2e-17 94.0 64 76.6
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 2.2e-17 94.0 60 65.0
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 9.4e-13 78.6 46 78.3


User provided reference genes

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